mRNA_18570 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|136059
Unique NamemRNA_18570
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: A0A836CG22_9STRA (Glyco_hydro_cc domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG22_9STRA)

HSP 1 Score: 509 bits (1310), Expect = 1.360e-182
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
Query:    1 TCTKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKYAALPASS 735
            TCTKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKYAALPASS
Sbjct:    1 TCTKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKYAALPASS 245          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: A0A835YYY4_9STRA (Glycosyl hydrolase catalytic core-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY4_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 7.920e-140
Identity = 191/244 (78.28%), Postives = 209/244 (85.66%), Query Frame = 1
Query:    4 CTKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKYAALPASS 735
            CTKSKKRGVSIDPR SG Y ARE  LLA G RWYNNWNVTS + TAF RLAFMPMVWSRYGA HW+QAI+  P  GG GSI+LGFNEPN   Q+NMTPQ+AA+ WG VL RAK+L FKLASPSPTKKGYPAALLSGI WLQQFFAEAD+ Y TTNAGVHYINMH+YDC++A+V DRID +S  F+   +I+SEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGL+KYA  PASS
Sbjct:   23 CTKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASS 266          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: UPI001E1D7362 (uncharacterized protein LOC123535364 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7362)

HSP 1 Score: 95.1 bits (235), Expect = 5.010e-19
Identity = 59/184 (32.07%), Postives = 91/184 (49.46%), Query Frame = 1
Query:  151 LAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNG 702
            L ++PMVW      H               +  LGFNEPN  +Q+N+T + AAA W  + A A  +  KL SPS ++ G P+ + S   W   FF+E        N  + +I  HTY CD   V   ++ L T ++   + ++E  C   +   +  +M+ FM+Q++P+LEA   V  YSW+ G
Sbjct:   73 LGYVPMVWGAQDNPHIQSD----------STYCLGFNEPNHPNQANLTSEAAAAGWRELEAAANGI--KLVSPSASECGGPSCIDSTKGWFDGFFSEC------ANCTIDFIATHTYMCDAGKVMSILEDLYTTYNKT-VWLTEFACGKIE---HPELMLIFMKQILPLLEAADYVYRYSWYKG 234          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: UPI0013A57DAF (glycosyl hydrolase n=1 Tax=Hymenobacter nivis TaxID=1850093 RepID=UPI0013A57DAF)

HSP 1 Score: 90.5 bits (223), Expect = 3.650e-17
Identity = 73/242 (30.17%), Postives = 106/242 (43.80%), Query Frame = 1
Query:    7 TKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTA--FRRLA--FMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKG-----YPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAG-NATMMMDFMQQVVPMLEAHPRVAYYSWFNG 702
            TKS KRG++ D +     SA ++  LA G  W+ N+    N   A  +  LA  ++P+ W     +  + A +           +LGFNEPN  SQSN+TP  AAA W  +   A++ + KL SP+    G           S  ++L  FFA         N  V YI +HTY C+   +  ++          PI ++E  C  A  A         +M   V  LE  P +  YSWF+G
Sbjct:   32 TKSPKRGLAYDYK-----SAADLQALAPGTSWWYNYTSVPNASVAGMYGGLAVDYVPIQWGARLGNGPVTADQLAANIPAGTQYLLGFNEPNFLSQSNLTPTQAAAIWPVLQEVARRKKLKLVSPALNYCGGCVQENGVTYYSPTQYLDAFFAACP------NCQVDYIALHTYVCEEQYLRQKV--AEVKKYNKPIWLTEFACGDAPTAQITLAAQKKYMLDAVNYLENEPDIFRYSWFSG 260          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: F8P4R7_SERL9 (Glyco_hydro_cc domain-containing protein n=2 Tax=Serpula lacrymans var. lacrymans TaxID=341189 RepID=F8P4R7_SERL9)

HSP 1 Score: 85.9 bits (211), Expect = 1.980e-16
Identity = 57/216 (26.39%), Postives = 94/216 (43.52%), Query Frame = 1
Query:  100 WYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWF-----NGLDKYAALPAS 732
            W  +W  T     A   L ++PM W   G + +   +     K      ILGFNEP+  SQSN+ P  AA+ W   +   K     L +P+ T         +GI WLQQF          ++  + ++ +H Y   V++    ++   + F   P+ V+E     A  + N+T +  F+  V+  L+A   +  Y+WF     +G   Y+ L +S
Sbjct:   48 WVYDWGTTPASYIASSGLPYIPMQWGTSGVESFAATVTSQGAK-----TILGFNEPDLSSQSNVDPSTAASLWTQYIQPLKAQGVTLGAPAVTNGP------TGIPWLQQFLGNC------SSCDIDFVPLHWYGEGVSNFESYVEQFHSTFPSYPLWVTEF----ASTSTNSTDVETFLTAVLTWLDAQSYITGYAWFALFRDDGTSYYSLLNSS 242          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: A0A8H4QU30_9AGAR (Glyco_hydro_cc domain-containing protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QU30_9AGAR)

HSP 1 Score: 85.1 bits (209), Expect = 3.880e-16
Identity = 63/231 (27.27%), Postives = 99/231 (42.86%), Query Frame = 1
Query:   10 KSKKRGVSIDPRISGAYSA--REVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWF 696
            K  KRG++       A+SA  ++         W  NW  +++D  A   + F+PM W   G D++      T +K     IILGFNEP+  SQSN+    AAA W   +        +L +P+ T          G  WL  F A      G T   + +I  H Y   + + S+ +  +   F   P+ V+E     A  + + T + +FM   +  L++   +  YSWF
Sbjct:   20 KDSKRGLA---NADSAFSADIKKANTSTSLVSWQYNWGSSASDTLAKSGIQFIPMQWGTSGIDNF-----STKVKSQGAQIILGFNEPDLASQSNIDAASAAALWKKYIDPLAASGVRLGAPAVTSGP------GGQVWLAAFLAACS---GCT---IDFIPFHWYGTGIDNFSNYVSSMHARFPNYPLWVTEF----ASTSSDTTEVANFMNSAIQHLDSLDWIERYSWF 226          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: A0A225AL79_9EURO (Glyco_hydro_cc domain-containing protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A225AL79_9EURO)

HSP 1 Score: 84.7 bits (208), Expect = 6.400e-16
Identity = 68/237 (28.69%), Postives = 107/237 (45.15%), Query Frame = 1
Query:   19 KRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLA-----GNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKY 714
            KR  +   ++  AY+   +  L   A W  NWN  S D T    + + PM+W     + W  A+  T L GG+ + +LGFNEP+  SQSNM+PQ AA ++   +      +  L SP+ T     A    G  W+Q +    + A       +HY        D A  SD  D ++ A      + S+ G  +  +      G+A   + F+Q+V+P L ++  V  Y++F   D Y
Sbjct:   32 KRATTSTSKVGSAYNDVSLISLISDASWAYNWNDAS-DGTVPSGVEYCPMLWGPKMYNSWTSAVS-TALSGGS-TCVLGFNEPDLGSQSNMSPQQAAIDYQTYITPLAG-QATLVSPAITNG---AGENVGFNWMQNWLTACNGACKPNVMAIHYY------AD-APASDFFDHVNNATS----LASQNGMDSVWITEFQHTGSAADQVAFLQEVIPWLNSNTGVGRYAYFFTADGY 250          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: UPI001E1DD565 (alkali-sensitive linkage protein 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD565)

HSP 1 Score: 84.7 bits (208), Expect = 6.800e-16
Identity = 58/180 (32.22%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  157 FMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWF 696
            F+PMVW  Y    W            AG ++LG NEPN  SQS++TP  AAA W +  + +  L     S +P   G      +  EWL +FFA        T+  V YI  HTY C V    D +  +   + G PI ++E  C   K   N   ++ +MQ+++P LE+   +  Y+W+
Sbjct:   73 FIPMVWGFY----WNTDYTCHTDVSNAG-VLLGPNEPNHQSQSDLTPAEAAAAWPSFESNSNGLALVAPSAAPCGSGCNG---NTTEWLDEFFALC------TDCRVDYIATHTYWCGVDKTMDFLQMIYDRY-GKPIWLTEFACRHKK--NNPAKVLSYMQEILPRLESATFIHKYAWY 235          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: A0A126PGZ9_9BACT (Carbohydrate-binding protein n=2 Tax=Hymenobacter sp. PAMC 26628 TaxID=1484118 RepID=A0A126PGZ9_9BACT)

HSP 1 Score: 86.3 bits (212), Expect = 7.580e-16
Identity = 71/242 (29.34%), Postives = 105/242 (43.39%), Query Frame = 1
Query:    7 TKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTA--FRRLA--FMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGY-----PAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAG-NATMMMDFMQQVVPMLEAHPRVAYYSWFNG 702
            TKS KRG++ D +     SA ++  LA G  W+ N+    +   A  +  LA  ++P+ W     +  + A +           +LGFNEPN  SQSN+TP  AAA W  +   A++   KL SP+    G           S  ++L  FFA         N  V YI +HTY C+   +  ++          PI ++E  C  A  A         +M   V  LE  P +  Y+WF+G
Sbjct:   31 TKSPKRGLAYDYK-----SAADLQALAPGTSWWYNYTSVPDASVAGVYGGLAVDYVPIQWGSRLNNGPVTADQLAANIPAGTQYLLGFNEPNFLSQSNLTPTQAAAIWPVLQEVARRKNLKLVSPALNYCGNCVQENGVTYYSPTQYLDAFFAACP------NCQVDYIALHTYVCEEQYLRQKV--AEVKKYNKPIWLTEFACGDAPAAQITLATQKKYMLDAVNYLENEPAIFRYAWFSG 259          
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Match: A0A8H8NU92_9AGAM (Glycoside hydrolase family 128 protein n=2 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8NU92_9AGAM)

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-15
Identity = 64/226 (28.32%), Postives = 98/226 (43.36%), Query Frame = 1
Query:   52 GAYSAREVGLLAKGARWYNNWNVTS--NDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLA--RAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNAT--MMMDFMQQVVPMLEAHPRVAYYSWFNGLDK 711
            G  S  E G ++    WY  W+ TS    P     L F+PM+W    A  + +A+    +     + ILG NEP   SQSNM+P  AA  W   L   RAK    +L SP+P+ +       +GI+W+  F    +   G T   V +I +H Y  +       I+    AF   PI V+E  C         +   +++F+ +    ++    V  Y+WF  + K
Sbjct:   36 GEISQFEAGKVS----WYYTWSPTSWVQPPP---NLEFVPMLWGGKDASTFAKAVTPDSIAANGWTHILGMNEPQEESQSNMSPGDAANMWKTYLEPLRAKNPNLRLGSPAPSSRP------NGIQWIHDFIGNCNVNGGCT---VDFIALHYYGVNSTQFIQHINDYHNAFQR-PIWVTEWACQDFNNGPQCSYNQIVEFLDETQTYMDNTDWVERYAWFGAMAK 244          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136059 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG22_9STRA1.360e-182100.00Glyco_hydro_cc domain-containing protein (Fragment... [more]
A0A835YYY4_9STRA7.920e-14078.28Glycosyl hydrolase catalytic core-domain-containin... [more]
UPI001E1D73625.010e-1932.07uncharacterized protein LOC123535364 n=1 Tax=Merce... [more]
UPI0013A57DAF3.650e-1730.17glycosyl hydrolase n=1 Tax=Hymenobacter nivis TaxI... [more]
F8P4R7_SERL91.980e-1626.39Glyco_hydro_cc domain-containing protein n=2 Tax=S... [more]
A0A8H4QU30_9AGAR3.880e-1627.27Glyco_hydro_cc domain-containing protein n=1 Tax=A... [more]
A0A225AL79_9EURO6.400e-1628.69Glyco_hydro_cc domain-containing protein n=1 Tax=T... [more]
UPI001E1DD5656.800e-1632.22alkali-sensitive linkage protein 1-like n=1 Tax=Me... [more]
A0A126PGZ9_9BACT7.580e-1629.34Carbohydrate-binding protein n=2 Tax=Hymenobacter ... [more]
A0A8H8NU92_9AGAM1.000e-1528.32Glycoside hydrolase family 128 protein n=2 Tax=Rhi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_256contigContig_256:50309..51043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|136059|gw1.256.17.1
GOsGO:0000271,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0003843,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005975,GO:0005976,GO:0006073,GO:0006074,GO:0006075,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009272,GO:0009277,GO:0009987,GO:0010383,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030312,GO:0033692,GO:0034406,GO:0034407,GO:0034410,GO:0034411,GO:0034637,GO:0034645,GO:0035251,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0051273,GO:0051274,GO:0051278,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071966,GO:0071969,GO:0071970,GO:1901576
Preferred nameTOS1
DescriptionPutative TOS1-like glycosyl hydrolase (DUF2401)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CBPA@1|root,2QSI7@2759|Eukaryota
Evalue4.87e-23
Seed ortholog2880.D7FKU0
Hectar predicted targeting categoryother localisation
TranscriptId136381
TrackFilteredModels1
ProteinId136059
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|136059gene_18570Tribonema minus UTEX_B_3156 geneContig_256 50309..51043 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18570_1exon_18570_1Tribonema minus UTEX_B_3156 exonContig_256 50309..51043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18570CDS_18570Tribonema minus UTEX_B_3156 CDSContig_256 50309..51043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|136059Trimin1|136059|gw1.256.17.1Tribonema minus UTEX_B_3156 polypeptideContig_256 50309..51043 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18570 ID=mRNA_18570|Name=jgi.p|Trimin1|136059|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_256:50309..51043- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACCTGCACAAAGTCAAAGAAGCGCGGCGTATCCATCGACCCACGCATCAG
CGGCGCGTACTCTGCGCGAGAGGTGGGCCTGCTGGCCAAAGGCGCGCGCT
GGTACAACAACTGGAATGTCACCTCCAACGACCCCACGGCGTTCAGGCGC
CTGGCCTTCATGCCCATGGTCTGGTCGCGGTACGGCGCGGACCACTGGAT
GCAGGCGATCAAGCAGACGCCGCTCAAAGGGGGCGCTGGCAGCATCATCC
TGGGGTTCAACGAGCCCAACAGCCACTCGCAGTCCAACATGACGCCGCAG
CTCGCAGCTGCTGAGTGGGGCGCGGTCTTGGCGCGCGCGAAGCAGCTGAG
GTTCAAGCTGGCGAGCCCCTCGCCCACAAAGAAGGGGTACCCGGCTGCGC
TGCTGTCGGGCATCGAGTGGCTGCAGCAGTTCTTCGCGGAGGCGGACCGC
GCATACGGCACCACCAACGCGGGCGTCCACTACATCAACATGCACACCTA
CGACTGCGACGTGGCCTCCGTCAGTGACCGCATCGACTGCCTCTCCACGG
CCTTTGACGGCCTCCCGATCATCGTGTCCGAGGTGGGTTGCGCGGCGGCC
AAGCTCGCGGGCAACGCCACCATGATGATGGACTTCATGCAGCAGGTGGT
GCCTATGCTGGAGGCACACCCGCGCGTCGCGTACTACAGCTGGTTCAACG
GCCTGGACAAGTACGCAGCACTGCCCGCCAGCTCC
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protein sequence of jgi.p|Trimin1|136059

>Trimin1|136059|gw1.256.17.1 ID=Trimin1|136059|gw1.256.17.1|Name=jgi.p|Trimin1|136059|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
TCTKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRR
LAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQ
LAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADR
AYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAA
KLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKYAALPASS
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mRNA from alignment at Contig_256:50309..51043-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18570 ID=mRNA_18570|Name=jgi.p|Trimin1|136059|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_256:50309..51043- (Tribonema minus UTEX_B_3156 )
ACCTGCACAAAGTCAAAGAAGCGCGGCGTATCCATCGACCCACGCATCAG CGGCGCGTACTCTGCGCGAGAGGTGGGCCTGCTGGCCAAAGGCGCGCGCT GGTACAACAACTGGAATGTCACCTCCAACGACCCCACGGCGTTCAGGCGC CTGGCCTTCATGCCCATGGTCTGGTCGCGGTACGGCGCGGACCACTGGAT GCAGGCGATCAAGCAGACGCCGCTCAAAGGGGGCGCTGGCAGCATCATCC TGGGGTTCAACGAGCCCAACAGCCACTCGCAGTCCAACATGACGCCGCAG CTCGCAGCTGCTGAGTGGGGCGCGGTCTTGGCGCGCGCGAAGCAGCTGAG GTTCAAGCTGGCGAGCCCCTCGCCCACAAAGAAGGGGTACCCGGCTGCGC TGCTGTCGGGCATCGAGTGGCTGCAGCAGTTCTTCGCGGAGGCGGACCGC GCATACGGCACCACCAACGCGGGCGTCCACTACATCAACATGCACACCTA CGACTGCGACGTGGCCTCCGTCAGTGACCGCATCGACTGCCTCTCCACGG CCTTTGACGGCCTCCCGATCATCGTGTCCGAGGTGGGTTGCGCGGCGGCC AAGCTCGCGGGCAACGCCACCATGATGATGGACTTCATGCAGCAGGTGGT GCCTATGCTGGAGGCACACCCGCGCGTCGCGTACTACAGCTGGTTCAACG GCCTGGACAAGTACGCAGCACTGCCCGCCAGCTCC
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Coding sequence (CDS) from alignment at Contig_256:50309..51043-

>mRNA_18570 ID=mRNA_18570|Name=jgi.p|Trimin1|136059|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_256:50309..51043- (Tribonema minus UTEX_B_3156 )
ACCTGCACAAAGTCAAAGAAGCGCGGCGTATCCATCGACCCACGCATCAG
CGGCGCGTACTCTGCGCGAGAGGTGGGCCTGCTGGCCAAAGGCGCGCGCT
GGTACAACAACTGGAATGTCACCTCCAACGACCCCACGGCGTTCAGGCGC
CTGGCCTTCATGCCCATGGTCTGGTCGCGGTACGGCGCGGACCACTGGAT
GCAGGCGATCAAGCAGACGCCGCTCAAAGGGGGCGCTGGCAGCATCATCC
TGGGGTTCAACGAGCCCAACAGCCACTCGCAGTCCAACATGACGCCGCAG
CTCGCAGCTGCTGAGTGGGGCGCGGTCTTGGCGCGCGCGAAGCAGCTGAG
GTTCAAGCTGGCGAGCCCCTCGCCCACAAAGAAGGGGTACCCGGCTGCGC
TGCTGTCGGGCATCGAGTGGCTGCAGCAGTTCTTCGCGGAGGCGGACCGC
GCATACGGCACCACCAACGCGGGCGTCCACTACATCAACATGCACACCTA
CGACTGCGACGTGGCCTCCGTCAGTGACCGCATCGACTGCCTCTCCACGG
CCTTTGACGGCCTCCCGATCATCGTGTCCGAGGTGGGTTGCGCGGCGGCC
AAGCTCGCGGGCAACGCCACCATGATGATGGACTTCATGCAGCAGGTGGT
GCCTATGCTGGAGGCACACCCGCGCGTCGCGTACTACAGCTGGTTCAACG
GCCTGGACAAGTACGCAGCACTGCCCGCCAGCTCC
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