Trimin1|348500|estExt_Genemark1.C_Ctg_250095 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348500
Unique NameTrimin1|348500|estExt_Genemark1.C_Ctg_250095
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length107
Homology
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A835YZS1_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS1_9STRA)

HSP 1 Score: 218 bits (555), Expect = 5.180e-72
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIEALRK 106
            MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIEALRK
Sbjct:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIEALRK 106          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A6H5JSH7_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSH7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.050e-37
Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 0
Query:    2 VKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKA 99
            V  C T E L +A+ GAG KLVV+DF ATWCGPC++IAP + + S  +TDVV+LKVDVD N DA+E YGIEAMPTFKFIKNGEV+E   GA+ + ++A
Sbjct:    3 VTPCDTPEALSTALAGAGSKLVVVDFHATWCGPCKRIAPFLAKLSETLTDVVFLKVDVDENSDASEKYGIEAMPTFKFIKNGEVVETVTGADEASIEA 100          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: UPI00083FE39C (thioredoxin-2 n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI00083FE39C)

HSP 1 Score: 126 bits (316), Expect = 1.370e-35
Identity = 61/102 (59.80%), Postives = 77/102 (75.49%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIE 102
            MV    + ++LK  +DGAG KLVVIDFFATWCGPC+ IAP ME  S E+TDV++LKVDVD+ +D A +Y I +MPTF FIKNG+V+E F GAN   LK+ I+
Sbjct:    1 MVVEIKSADDLKVQLDGAGDKLVVIDFFATWCGPCKMIAPKMEGLSKEITDVIFLKVDVDVCEDLAGEYEITSMPTFIFIKNGKVLETFSGANFDKLKSTIQ 102          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: UPI0010F86AA8 (thioredoxin-2-like n=1 Tax=Osmia bicornis bicornis TaxID=1437191 RepID=UPI0010F86AA8)

HSP 1 Score: 124 bits (310), Expect = 1.120e-34
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKI 101
            MV    + E+LKS I+ AG +L+VIDF+ATWCGPC+ IAP +E+ S EM DV+++KVDVD+ +D A DY I +MPTF FIKNG+V+E F GAN   +K  I
Sbjct:    1 MVVEIESVEDLKSKIEKAGDQLIVIDFYATWCGPCKMIAPKIEELSKEMQDVIFVKVDVDVREDIATDYDINSMPTFVFIKNGKVVESFAGANYDKVKDTI 101          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A7M7T7S9_NASVI (Thioredoxin n=3 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7T7S9_NASVI)

HSP 1 Score: 120 bits (302), Expect = 1.860e-33
Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIE 102
            MV    T EELK+ +  AG KLVVIDFFATWCGPC+ IAP +++ S E+TDVV+LKVDVD  +  AE+Y + +MPTF FIKNG V+++F GAN   +K  ++
Sbjct:    1 MVIQVKTAEELKTKLTEAGEKLVVIDFFATWCGPCKMIAPKLDELSQELTDVVFLKVDVDELEGVAEEYDVNSMPTFVFIKNGSVLDKFSGANIEKVKLTVQ 102          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A076FDZ6_9MAXI (Thioredoxin 2 (Fragment) n=1 Tax=Paracyclopina nana TaxID=565004 RepID=A0A076FDZ6_9MAXI)

HSP 1 Score: 120 bits (302), Expect = 1.860e-33
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIE 102
            MV    T  +L + ++ AG KLVVIDFFATWCGPC+ IAP +E+W++ M +VV++KVDVD N++AA++Y I AMPTF  IKN E + + +GANP  LK  ++
Sbjct:    1 MVSQLATLADLNTTLEEAGDKLVVIDFFATWCGPCKMIAPKIEEWASAMDNVVFVKVDVDENEEAAKEYNISAMPTFILIKNKEKVADLMGANPDKLKELVD 102          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: D2V4N1_NAEGR (Thioredoxin n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V4N1_NAEGR)

HSP 1 Score: 119 bits (298), Expect = 7.320e-33
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGL 97
            MVK   +  ELKS I+G  G LVV+DFFATWCGPC++IAP +E+WS   T V++LKVDVDIN ++A  Y +EAMPTF F K G+ I+  VGANP+ L
Sbjct:    1 MVKQVDSHSELKSLIEGHEG-LVVVDFFATWCGPCKRIAPTIEEWSKTHTTVLFLKVDVDINDESASVYSVEAMPTFLFFKGGQKIKSVVGANPNAL 96          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A0P5R5L8_9CRUS (Thioredoxin n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5R5L8_9CRUS)

HSP 1 Score: 117 bits (294), Expect = 3.060e-32
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIE 102
            MV    + ++    +  AGGKLVV+DF+ATWCGPC+ IAP +E  S E+TDVV+LKVDVD  +D A DY I  MPTF ++KNG  + EF GAN + L+A I+
Sbjct:    1 MVYQVASKDDFSEQLKNAGGKLVVVDFYATWCGPCKMIAPKIEAMSKELTDVVFLKVDVDECEDVASDYNISCMPTFLYLKNGVKVAEFSGANETQLRALIQ 102          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A6P3TZ43_BOMTE (Thioredoxin n=5 Tax=Bombus TaxID=28641 RepID=A0A6P3TZ43_BOMTE)

HSP 1 Score: 117 bits (294), Expect = 3.060e-32
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIE 102
            MV       +LKS ++ AG  LVV+DFFATWCGPC+ IAP +E+ S EM +V++LKVDVD  +D A +YGI +MPTF FIKN +V+E F GAN   LK+ I+
Sbjct:    1 MVVQVMNAADLKSQLEKAGDNLVVVDFFATWCGPCKMIAPKLEELSKEMENVIFLKVDVDECEDIASEYGISSMPTFVFIKNSKVLETFSGANYDKLKSTIQ 102          
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Match: A0A8D9B3L8_9HEMI (Thioredoxin n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9B3L8_9HEMI)

HSP 1 Score: 117 bits (294), Expect = 3.150e-32
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0
Query:    1 MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMTDVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAKIEALR 105
            M        +LKS    AG KL+VIDF+ATWCGPC+QIAP +E+ + E  DVV+LKVDVD N+D A +Y I +MPTF F+KN E +E+F GAN   LKA + A R
Sbjct:    1 MAAKVSNMADLKSKFADAGNKLIVIDFYATWCGPCKQIAPKIEELAAEYQDVVFLKVDVDENEDIAMEYDISSMPTFVFVKNSEKVEQFSGANFDKLKATVLAKR 105          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348500 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZS1_9STRA5.180e-72100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A6H5JSH7_9PHAE1.050e-3762.24Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
UPI00083FE39C1.370e-3559.80thioredoxin-2 n=1 Tax=Ceratina calcarata TaxID=156... [more]
UPI0010F86AA81.120e-3456.44thioredoxin-2-like n=1 Tax=Osmia bicornis bicornis... [more]
A0A7M7T7S9_NASVI1.860e-3355.88Thioredoxin n=3 Tax=Pteromalinae TaxID=272242 RepI... [more]
A0A076FDZ6_9MAXI1.860e-3352.94Thioredoxin 2 (Fragment) n=1 Tax=Paracyclopina nan... [more]
D2V4N1_NAEGR7.320e-3358.76Thioredoxin n=1 Tax=Naegleria gruberi TaxID=5762 R... [more]
A0A0P5R5L8_9CRUS3.060e-3252.94Thioredoxin n=1 Tax=Daphnia magna TaxID=35525 RepI... [more]
A0A6P3TZ43_BOMTE3.060e-3254.90Thioredoxin n=5 Tax=Bombus TaxID=28641 RepID=A0A6P... [more]
A0A8D9B3L8_9HEMI3.150e-3254.29Thioredoxin n=1 Tax=Cacopsylla melanoneura TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 31..40
score: 65.11
coord: 70..81
score: 38.06
coord: 23..31
score: 51.42
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..106
e-value: 1.4E-36
score: 127.2
NoneNo IPR availablePIRSRPIRSR001488-1PIRSR001488-1coord: 11..60
e-value: 0.024
score: 12.0
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 21..99
e-value: 6.2E-11
score: 38.9
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 19..95
e-value: 4.4E-24
score: 82.4
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 1..103
NoneNo IPR availablePANTHERPTHR46115THIOREDOXIN-LIKE PROTEIN 1coord: 1..103
NoneNo IPR availableCDDcd02947TRX_familycoord: 9..102
e-value: 2.91179E-37
score: 119.2
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 10..102
e-value: 8.4E-28
score: 96.4
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..106
score: 14.573417
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 24..42
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 7..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:776630..778178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348500mRNA_6684Tribonema minus UTEX_B_3156 mRNAContig_25 776569..778234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348500|estExt_Genemark1.C_Ctg_250095 ID=Trimin1|348500|estExt_Genemark1.C_Ctg_250095|Name=jgi.p|Trimin1|348500|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=107bp
MVKSCGTTEELKSAIDGAGGKLVVIDFFATWCGPCRQIAPLMEQWSNEMT
DVVYLKVDVDINKDAAEDYGIEAMPTFKFIKNGEVIEEFVGANPSGLKAK
IEALRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf