mRNA_17855 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354425
Unique NamemRNA_17855
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A835Z154_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z154_9STRA)

HSP 1 Score: 287 bits (734), Expect = 2.780e-98
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1
Query:    1 MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLDSR 393
            MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLDSR
Sbjct:    1 MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLDSR 131          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A6H5JXP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP7_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.670e-22
Identity = 38/93 (40.86%), Postives = 62/93 (66.67%), Query Frame = 1
Query:   28 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQD 306
            G D+ +L FQ+ EVL   ++   ++G L V   +V+P +DPWP+PL G P+G  +N++R Q+D+L  HYPER+ +L  +G  W +P+  DW++
Sbjct:  948 GDDELYLYFQWPEVLISFYSVIKLKGHLDVSPQYVIPHEDPWPLPLHGTPVGLYLNIIRAQKDLLMEHYPERFEILRSMGIMWNEPLLVDWRE 1040          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: D7FJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ7_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.620e-21
Identity = 37/93 (39.78%), Postives = 62/93 (66.67%), Query Frame = 1
Query:   28 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQD 306
            G D+ +L FQ+ EVL   ++   ++G L V   +V+P +DPWP+PL G P+G  +N++R Q+D+L  +YPER+ +L  +G  W +P+  DW++
Sbjct:  628 GDDELYLYFQWPEVLISFYSVIKLKGHLDVSPQYVIPHEDPWPLPLHGTPVGLYLNIIRAQKDLLMDNYPERFEILRSMGIMWNEPLLVDWRE 720          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A8J2SVI2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVI2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.140e-20
Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 1
Query:   10 QTVREEG---ADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLP 345
            QT+ E G    D R     ++E L  LF+++ I+G L V  D+VVP++DPWP+PLR  PLG  VN VR Q+ V  RH+ ER R LD +GF WL P+FE   D +     D +P P
Sbjct:  531 QTLDELGFEWGDRRISGLSWNEFLGCLFSFSKIKGSLNVRWDFVVPNEDPWPLPLRNAPLGRWVNEVRAQQPVFERHFAERKRFLDLMGFKWLPPLFEG-DDATSDEARDQRPPP 644          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: F0YNU5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNU5_AURAN)

HSP 1 Score: 91.3 bits (225), Expect = 1.300e-18
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 1
Query:   55 QYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFE 294
            Q+D  L  LF+++ I+G + VD D+VVPD+DPWP PLR  PLG  VN VR Q+     H+ ER R LD +GF WL PVFE
Sbjct:  593 QWDAFLACLFSHSKIKGTVNVDWDFVVPDEDPWPFPLRASPLGRWVNEVRDQQRTFDAHFGERKRFLDLMGFQWLPPVFE 672          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S3JX66_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX66_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.320e-17
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 1
Query:   55 QYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVF 291
            Q+   L  LF+Y+ I+G L +  D+V+PD+DPWP+PLRG  LG  VN++R Q  VL  H+  R ++LD +GF +L P+F
Sbjct:  675 QWHHFLACLFSYSKIKGSLSIAWDFVIPDEDPWPLPLRGEHLGTKVNLIREQESVLRTHFKHRAQLLDAMGFVFLPPMF 753          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S2NS69_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NS69_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.990e-16
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 1
Query:   28 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFED 297
            G D+ F+   +++ LCGL+ Y  IRGD CVD ++ +PD++PWP  L   PLG  +N VR ++D+ +  Y  ++R L    F WL P  ED
Sbjct:  343 GDDELFIGAPFEKFLCGLWVYYQIRGDACVDLEFRIPDEEPWPEALAHFPLGHAMNFVRHKKDIFWSDYRAKWRSLYRFDFLWL-PAVED 431          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S2JR57_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JR57_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.490e-16
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 1
Query:   28 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFED 297
            G D+ F+   +++ LCGL+ Y  IRGD CVD ++ +PD++PWP  L   PLG  +N VR ++D+ +  Y  ++R L    F WL P  ED
Sbjct:  650 GDDELFIGAPFEKFLCGLWVYYQIRGDACVDLEFRIPDEEPWPEALAHFPLGHAMNFVRHKKDIFWSDYRAKWRSLYRFDFLWL-PAVED 738          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S3QCY2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCY2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.170e-15
Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   28 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVF---------EDWQDISVRGVG 327
            G+D +FL   +++ +C +FAY ++RGDL V  D+V+P D PWP  L G  LG  V  +R  ++    ++PE+ ++L  + F W   +          E W+D  V GVG
Sbjct:  642 GSDRKFLDVPFEKSMCAMFAYFLVRGDLFVYEDFVMPGDKPWPKALAGFELGKAVKRIRELQNFFEAYHPEKVKLLRRVEFVWFPELSLPLNPEEGPESWEDTFVEGVG 750          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A1Z5KL42_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL42_FISSO)

HSP 1 Score: 75.5 bits (184), Expect = 4.320e-13
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 1
Query:   16 VREEGADDRFLL-FQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLD 387
            +R +  D+++ L   +++ +C ++AY MIRGDL V  D+V+PD+DPWP  L G  LG  V  +R  ++ L  ++PE+  +L  + F W         D + R +     L   FG   D AK +D
Sbjct:  689 LRFDWGDEKYFLDVPFEKAMCAMYAYYMIRGDLFVYEDFVMPDEDPWPEALAGYELGQAVKRLRELQNFLEAYHPEKVSLLRMIDFMWFPETMALPLDPNERAMTSETLLLSAFGHP-DYAKMVD 812          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A835Z2B1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 3.810e-105
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
Query:    1 MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGVGLI 549
            MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGVGLI
Sbjct:    1 MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGVGLI 183          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A6H5LAT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT6_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.770e-35
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 1
Query:   13 VRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQN 534
            + +G   +V+ QAL  PWK C GVEIVP+LHD+  AAL EA R                        LR++APC+L LGD+          D +   DV+FCY S++PA GDLLT  S+ L   LR GA V+TTDRRL S+ G WEFAL   REG N+ETGG S+AYIWEV ++
Sbjct:  143 IGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQAALQEADRLAKGEENALSPETSRL--------LRSMAPCSLSLGDV------NDDVDIS-DIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSD-GPWEFALLGEREGRNSETGGKSIAYIWEVVRS 300          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: D7G834_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G834_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.730e-20
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 1
Query:  304 DVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQN 534
            DV+FCY S++PA GDLLT  S+ L   L+ GA V+TTDRRL S+ G WEFAL   REG N+ETGG S+AYIWEV ++
Sbjct:   10 DVLFCYSSSFPAFGDLLTEFSYTLGHKLQPGAQVITTDRRLVSD-GPWEFALLGEREGRNSETGGKSIAYIWEVVRS 85          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S0Q107_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q107_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 5.690e-17
Identity = 63/176 (35.80%), Postives = 81/176 (46.02%), Query Frame = 1
Query:   13 VRNGAFGIVIGQALRHP-WKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLAS-EPGAWEFALRATREGVNAETGGASVAYIWEVTQN 534
            V +G   +V   A+  P    C GVE V  LHD+A  A + +                               PC    GD      GTPP  + A  D +F Y S +P+AGD LT  S A + +L  G  ++TTD+RL S E G WEF L    +G NAETGG S  YIWEV ++
Sbjct:   13 VGSGCGRLVFAAAVLQPSLSRCVGVEKVAGLHDLACEAASTSPLPAGSP------------------------PCEFLCGDAFE-FLGTPPPYSLAAPDCIFIYSSAFPSAGDTLTDASLAFS-MLPAGTRIITTDKRLGSDEAGRWEFQLLKELDGPNAETGGTSTGYIWEVRRD 162          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A835Z154_9STRA2.780e-98100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JXP7_9PHAE1.670e-2240.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJQ7_ECTSI2.620e-2139.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2SVI2_9STRA3.140e-2045.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YNU5_AURAN1.300e-1853.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3JX66_9STRA7.320e-1746.84Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2NS69_9STRA1.990e-1641.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2JR57_9STRA2.490e-1641.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3QCY2_9STRA4.170e-1534.86Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5KL42_FISSO4.320e-1333.60Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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BLAST of jgi.p|Trimin1|354425 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z2B1_9STRA3.810e-105100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LAT6_9PHAE1.770e-3547.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G834_ECTSI2.730e-2061.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0Q107_9EUKA5.690e-1735.80Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_246contigContig_246:140..1699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354425|estExt_Genemark1.C_Ctg_2460001
Max annot lvl2759|Eukaryota
EggNOG OGs2BAJG@1|root,2S0VX@2759|Eukaryota
Evalue2.71e-22
Seed ortholog2880.D7FJQ7
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_010570.1
TranscriptId354747
TrackFilteredModels1
ProteinId354425
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354425gene_17855Tribonema minus UTEX_B_3156 geneContig_246 140..1699 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17855_1exon_17855_1Tribonema minus UTEX_B_3156 exonContig_246 140..160 +
exon_17855_2exon_17855_2Tribonema minus UTEX_B_3156 exonContig_246 788..1008 +
exon_17855_3exon_17855_3Tribonema minus UTEX_B_3156 exonContig_246 1507..1699 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17855CDS_17855Tribonema minus UTEX_B_3156 CDSContig_246 140..160 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17855UTR3_17855Tribonema minus UTEX_B_3156 three_prime_UTRContig_246 1661..1699 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354425Trimin1|354425|estExt_Genemark1.C_Ctg_2460001Tribonema minus UTEX_B_3156 polypeptideContig_246 140..1660 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17855 ID=mRNA_17855|Name=jgi.p|Trimin1|354425|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=435bp|location=Sequence derived from alignment at Contig_246:140..1699+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTGAGCAAACAGTGCGGGAGGAGGGCGCGGACGACCGCTTCCTCCT
GTTCCAGTACGACGAGGTCCTGTGCGGTCTGTTTGCGTACAACATGATCC
GCGGCGACCTGTGCGTGGATGCGGACTGGGTGGTGCCCGACGACGACCCG
TGGCCCATGCCGCTGCGCGGCCTGCCGCTAGGGTTCCTTGTAAACGTCGT
GAGGCTGCAGCGCGACGTGCTGTACCGGCACTACCCGGAGAGGTACCGCA
TGCTCGACGGTCTCGGCTTCTACTGGCTGGACCCTGTCTTTGAGGACTGG
CAGGACATATCGGTTAGGGGGGTAGGGGACGGCAAGCCGCTGCCCGGGCC
CTTTGGGGACATACTTGACGGTGCAAAGCAATTGGACAGTCGCTAGAAGC
AGAGGGAGGGGGGGGGGGGGGGGTCGTAGAACCCC
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protein sequence of jgi.p|Trimin1|354425

>Trimin1|354425|estExt_Genemark1.C_Ctg_2460001 ID=Trimin1|354425|estExt_Genemark1.C_Ctg_2460001|Name=jgi.p|Trimin1|354425|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp
MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDP
WPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDW
QDISVRGVGDGKPLPGPFGDILDGAKQLDSR*
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mRNA from alignment at Contig_246:140..1699+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17855 ID=mRNA_17855|Name=jgi.p|Trimin1|354425|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1560bp|location=Sequence derived from alignment at Contig_246:140..1699+ (Tribonema minus UTEX_B_3156 )
ATGCGTGAGCAAACAGTGCGGGTGAGGGTTAGGGTTAGGGTCAGAGTTAG GCAACGCAAGGGCGCCTGCGCCGCGCTCGGGTTTCCCTGGAAGCAGGTGT GCAGCGCCACGCCGTTTGCAGCGGCGGCCCTGTCACGCACGCTTCTGCTG CGCAAGGCCCGGCGGCGGCCGATGCAAGAGCAAACAGTGCGGGTCAGGGC CAGGGTCAGGGGCTGATGCGTATGTGCCCGCAACCCGCGCGCCCCCCCCT TGCCCCCCCCCCCCCCCCCCCCCCCCTGGATCCACTGCAGCAATTACAAC CGTGGATCATGTCACAGTCTGCATTTCTCCAAGGTTAGGGTTGGGGCCAG GGTCGGGGTTAGGGTTAGGCGGGCATGCGCCGCATGCCCGCGCCCCTTCC ACCCGGATTTCCGCGCACTGCGCGTGCATTGCTCGCATTGCTTACACGCG TGCTCTCGCTGCTCTCAGGAGGTGGGCGCGGACGCCCGCTTACTCCTGTT CCAGTGAACGGCGAGGTCCTGCGCAGGCCTGTTCGCCTACACCACAATCC TCGTTGACCCCGCTCTGCCGTCGCTCACGTGCAAGCTCAGCGCTGAACCT CTGCATCTCGTTCCGACCGCACCCCTGCGCGCGCGCTGCCGCTCCCAGGA GGAGGGCGCGGACGACCGCTTCCTCCTGTTCCAGTACGACGAGGTCCTGT GCGGTCTGTTTGCGTACAACATGATCCGCGGCGACCTGTGCGTGGATGCG GACTGGGTGGTGCCCGACGACGACCCGTGGCCCATGCCGCTGCGCGGCCT GCCGCTAGGGTTCCTTGTAAACGTCGTGAGGCTGCAGCGCGACGTGCTGT ACCGGCACTACCCGGAGAGGTGCGTTCTTTATTTGAGTATCGATGTCCTG CACTTCTTGACTGTACGTGGTGCGTCACCACTTGCAGTAGTATTGTCAGC ATTGTGCGCCTGCAGCGCGGCGTGCTGTACCGGCACTACCCTGAGATGCT AGTCACCACTTGCAGTATTGGCATGGCGTACAGCAACTGCGCCCGCTGGC AGCACGCAAGCTACTGGCCTAATCATGTCAACTGAGCGCCGAAAGCTTGG CTGCCAAACAGATGCTTGAACCAGCAACCGCAGACGTCCGAAACAGTATT GCAGACAAGGCAGGGGGCCCTTGACGATGGGCCGCACGCACACGCTGCTT GCACACTTTTTTCGTCAAGGATTTTCATGAAACAGCATCCGGCAAAATTG GCGCGGACACTGTGCCCGTGGCAATAAGCAGCGCTGCGCTGCGCCTTTGA CCCCCCTGACCCCCCCCCCCCCCACCTCCCGCCCTTCATGTGTGTGTCGC CCCCCCCCCCCCCCCAGGTACCGCATGCTCGACGGTCTCGGCTTCTACTG GCTGGACCCTGTCTTTGAGGACTGGCAGGACATATCGGTTAGGGGGGTAG GGGACGGCAAGCCGCTGCCCGGGCCCTTTGGGGACATACTTGACGGTGCA AAGCAATTGGACAGTCGCTAGAAGCAGAGGGAGGGGGGGGGGGGGGGGTC GTAGAACCCC
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Coding sequence (CDS) from alignment at Contig_246:140..1699+

>mRNA_17855 ID=mRNA_17855|Name=jgi.p|Trimin1|354425|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=396bp|location=Sequence derived from alignment at Contig_246:140..1699+ (Tribonema minus UTEX_B_3156 )
ATGCGTGAGCAAACAGTGCGGGAGGAGGGCGCGGACGACCGCTTCCTCCT
GTTCCAGTACGACGAGGTCCTGTGCGGTCTGTTTGCGTACAACATGATCC
GCGGCGACCTGTGCGTGGATGCGGACTGGGTGGTGCCCGACGACGACCCG
TGGCCCATGCCGCTGCGCGGCCTGCCGCTAGGGTTCCTTGTAAACGTCGT
GAGGCTGCAGCGCGACGTGCTGTACCGGCACTACCCGGAGAGGTACCGCA
TGCTCGACGGTCTCGGCTTCTACTGGCTGGACCCTGTCTTTGAGGACTGG
CAGGACATATCGGTTAGGGGGGTAGGGGACGGCAAGCCGCTGCCCGGGCC
CTTTGGGGACATACTTGACGGTGCAAAGCAATTGGACAGTCGCTAG
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