mRNA_4994 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348411
Unique NamemRNA_4994
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A836CIN0_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN0_9STRA)

HSP 1 Score: 317 bits (811), Expect = 4.800e-108
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
Query:  133 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLRGTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLGLQFQTREHLD 612
            MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLRGTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLGLQFQTREHLD
Sbjct:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLRGTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLGLQFQTREHLD 160          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A812VHP3_9DINO (Pdia6 protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VHP3_9DINO)

HSP 1 Score: 98.2 bits (243), Expect = 1.230e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   40 SKASTLVSKNLHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 390
            S A    +  +H LT   F+ TVR G   PW + F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:   20 SDAVDPAATKVHELTGSNFDSTVRNGHEMPWFVKFHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SDGHRYRFRGSRTLDSLEAFAAGGYRE 135          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A484EI82_BRELC (Thioredoxin domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EI82_BRELC)

HSP 1 Score: 94.4 bits (233), Expect = 3.730e-20
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   52 TLVSKNLHVLTSITFEPTVRYGKG---GPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 390
            ++ + N+ VLT   FE   + G G   G W++ F A WC HCK L PI++TVA+EL G+++ A +D  EN  L +RF++ GFPTI    + G VY +AG  +   L AFA  G+++
Sbjct:   20 SVATSNVIVLTDSDFEHKTQAGSGATTGDWLVEFYAPWCGHCKKLTPIYETVAQELQGELNVAKVDVTENAELGKRFNIRGFPTILHF-SHGKVYKYAGKRTKDDLVAFARAGFKN 134          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A813C3A8_9DINO (Proline--tRNA ligase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813C3A8_9DINO)

HSP 1 Score: 99.0 bits (245), Expect = 4.210e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   40 SKASTLVSKNLHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 390
            S A    +  +H LT   F+ TVR G   PW + F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:   20 SDAVDPAATKVHELTGSNFDSTVRNGHEMPWFVKFHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SHGHRYRFRGSRTLDSLEAFAAGGYRE 135          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A812VIT4_SYMMI (Proline--tRNA ligase n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VIT4_SYMMI)

HSP 1 Score: 98.2 bits (243), Expect = 8.730e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   40 SKASTLVSKNLHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 390
            S A    +  +H LT   F+ TVR G   PW + F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:   20 SDAVDPAATKVHELTGSNFDSTVRNGHEMPWFVKFHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SDGHRYRFRGSRTLDSLEAFAAGGYRE 135          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A813GR85_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GR85_POLGL)

HSP 1 Score: 95.9 bits (237), Expect = 1.010e-19
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1
Query:   40 SKASTLVSKNLHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFG 426
            S+A    ++N   LT   F   V+ G G PW +   A WC HC+ LAP+W  +A++L GQV    +D      L+ ++ V G+P I  + A G  + + G   +  L+AFALGG+ +AA  SS   PFG
Sbjct:   35 SRADQAAARNTLELTGENFSQAVQNGTGLPWFIKLYAPWCGHCQSLAPVWDDLAQKLQGQVVLGKVDATAEEVLAHKWEVDGYP-ILILFANGQAHLYTGPRCLAALEAFALGGWAEAASASSKEEPFG 162          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A196SKN1_BLAHN (Thioredoxin-related protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SKN1_BLAHN)

HSP 1 Score: 92.8 bits (229), Expect = 1.280e-19
Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   55 LVSKNLHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPT-IFFVDARGDVYAFAGTASVTTLKAFALGGYRD 390
            L   N   LT +T   T      GPW + F A WC HCK LAP W+ +A+E+DG+V+ A +D   N ALS+ + + GFPT IFF D  G    + G  S+  LKAF L G++D
Sbjct:   21 LNDDNFETLTQMTTGSTT-----GPWFIMFFAPWCGHCKKLAPTWENLADEVDGEVNIAKVDATANNALSKMYSIEGFPTLIFFKD--GKYVKYEGGRSLEDLKAFVLEGFKD 126          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: H3G8D9_PHYRM (Thioredoxin domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8D9_PHYRM)

HSP 1 Score: 90.9 bits (224), Expect = 7.370e-19
Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 1
Query:   61 SKNLHVLTSITFEPTVRYGKG---GPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAP 420
            + N+ VL++  FE   + G G   G W++ F A WC HCK L PI++TVA +L G+V+ A +D   N  L +RF + GFPT+    + G  Y FAG  ++  L AFA GG++       +GAP
Sbjct:   20 ASNVVVLSTSDFEHKTQAGSGATTGDWLVEFYAPWCGHCKKLEPIYETVANDLKGEVNVAKVDVTANSELGKRFGIRGFPTVLHF-SHGKSYKFAGKRTLEELSAFARGGFKSVEGEVVSGAP 141          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A5B8MU99_9CHLO (Thioredoxin domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU99_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 8.590e-19
Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 DSKASTLVSKNLHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTA-SVTTLKAFALGGYRDAAKLSSAGAPFGLRGTV 441
            +  A   ++KN   +  IT          GPWM+  +ASWC HCK L P W  +AE+L G+V    IDG EN+ LS+R HV G+PTIF VD +G +  +   A  +  L  FA+ GY+    L     P  L G +
Sbjct:   35 EGAAEGKLTKNAGEVVEITDSNYDNLIHDGPWMVVVSASWCPHCKQLEPTWVKLAEKLRGKVRVGKIDGPENKILSKRLHVVGYPTIFHVDRKGLIRDYGDQARDLEKLYQFAVSGYKQYEPLPWYHTPHSLFGQI 170          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: T0Q3S3_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q3S3_SAPDV)

HSP 1 Score: 86.3 bits (212), Expect = 9.910e-16
Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 1
Query:   70 LHVLTSITFEPTVRYGKGGPWMLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPT-IFFVDARGDVYAFAGTASVTTLKAFALGGYRD 390
            +  LT+ TF+  V       W++ F A WC HCK LAP +  ++++L+GQV  A +D  E+ AL  RF + GFPT +FF D  G +Y +AGT S+  L  F   GY +
Sbjct:  168 VEALTADTFDANVLAPGSNGWLVKFYAPWCGHCKQLAPTYDALSQDLNGQVHIAKVDVTEHEALGERFGIQGFPTLVFFKD--GKMYEYAGTRSLDALTTFVTSGYLE 273          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A835Z4L3_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L3_9STRA)

HSP 1 Score: 332 bits (851), Expect = 1.680e-113
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 2
Query:   71 MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM
Sbjct:    1 MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 182          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: D8LIY3_ECTSI (Peroxisomal membrane protein PEX14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 5.590e-17
Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 2
Query:   71 MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGV--QGVITGGVLHLSA-------VAAKDLGADAAG---------QARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAV 577
            +  R++MV RAV FL HPKV  AP +K+I+FL++K+LT EEI EAL++A    +  A+A T  A     T +RF+   V  + V +GG++ +S         A  D G    G         QA + L++I  +L+  G+S S+++SA V VR+   D   V   W  W+  +N PA   ++ G  V
Sbjct:    2 VDIRQDMVKRAVSFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVAAPT-KRFQKGSVRSEAVASGGIVFISGQTALPSPTAGDDSGEGDVGVAESLSPEQQAARALDKIKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVIQTGAIV 187          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A3F2UCK5_9HYPH (RidA family protein n=1 Tax=Mesorhizobium sp. YM1C-6-2 TaxID=1827501 RepID=A0A3F2UCK5_9HYPH)

HSP 1 Score: 72.4 bits (176), Expect = 1.250e-12
Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  308 QGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAA 613
            QGV   G+   SA  AKD   DAAGQ R+VL++IDA+L  +G  +S I+SAT+++ +   D  A+ + W+ W+  +  PA ACVEA  + P   V IQ+ AA
Sbjct:   14 QGVSWNGMFVTSAQVAKDFDLDAAGQTREVLDKIDALLAEQGYDKSNIVSATIWLADI-ADYAAMNSVWDAWVSTDEPPARACVEARFSSPRIKVEIQIMAA 114          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A7U7ELF3_9PSED (Aminoacrylate peracid reductase RutC n=1 Tax=Pseudomonas carbonaria TaxID=2762745 RepID=A0A7U7ELF3_9PSED)

HSP 1 Score: 72.4 bits (176), Expect = 1.310e-12
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 2
Query:  308 QGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            + VI  G ++L+   A DL  D   Q R+ L  ID +L   G+ RSRI+SAT+++++   D   + AEW+ WL     PA ACVEA    P  LV I + AA+
Sbjct:   14 EAVIHNGTVYLAGQLADDLTGDICQQTRETLASIDRLLAEAGSDRSRILSATIYLKDIAADYAGLNAEWDAWLVPGTAPARACVEANMYAPEVLVEISIVAAL 116          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A5Q2QE15_9GAMM (RidA family protein n=1 Tax=Litoricola lipolytica TaxID=418701 RepID=A0A5Q2QE15_9GAMM)

HSP 1 Score: 70.9 bits (172), Expect = 4.590e-12
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  281 IQRFEHAG--VQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            IQRFE      + VI  G ++L    A D  AD + Q R  L +IDA+L++ G+ R+R++SAT++V+    D  A+ A W+ W+   + PA ACV+A  A  A LV I VTAA+
Sbjct:    2 IQRFETKARMSRAVIHNGTVYLCGQVAADADADISEQTRTTLAKIDALLESVGSDRTRLLSATIYVKTMD-DFAAMNAVWDAWVPEGHAPARACVQAAMARDALLVEITVTAAV 114          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A4P6F7M9_9MICO (RidA family protein n=1 Tax=Agromyces protaetiae TaxID=2509455 RepID=A0A4P6F7M9_9MICO)

HSP 1 Score: 70.5 bits (171), Expect = 6.230e-12
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 2
Query:  308 QGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            Q V+ GG+ +L+   A   GAD   Q+R  L Q+DA+L+A G  +S++++AT+++ +  T G  + + W+ W+ GEN PA A VEA  A P   V  QVTAA+
Sbjct:   14 QAVVHGGIAYLAGQVAA--GADVVEQSRAALAQVDALLEAAGTDKSKLLTATIYLADIATFGD-MNSVWDEWVDGENPPARATVEAKLATPEFFVEFQVTAAI 113          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A1H0GGX4_9HYPH (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Ensifer sp. YR511 TaxID=1855294 RepID=A0A1H0GGX4_9HYPH)

HSP 1 Score: 69.3 bits (168), Expect = 1.730e-11
Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  281 IQRFEHAG-VQGVIT-GGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAA 613
            I RFE    +  V+T GGV +L+ + A DL  D AGQ RQVL + DA ++     +SR++SAT+++R+  +D  A+   WE W+   N PA A  EA  A P  LV I  TAA
Sbjct:    2 IDRFEKGPRMSRVVTHGGVAYLAGITADDLSQDIAGQTRQVLAKADANMEKAKTDKSRLLSATIWLRDI-SDFDAMNVVWESWVDASNPPARATCEARLAKPQILVEITFTAA 113          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: UPI0010C11760 (RidA family protein n=5 Tax=Roseomonas TaxID=125216 RepID=UPI0010C11760)

HSP 1 Score: 68.6 bits (166), Expect = 3.510e-11
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  332 LHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTA 610
            ++L+ + A DL  D  GQ  +VL +IDA L+A G  ++R+++AT++V++   D GA+   W  WL     PA ACVEA  A P  LV I VTA
Sbjct:   23 VYLAGMTADDLSKDIKGQTAEVLAKIDAALEANGTDKTRMLTATIWVKHI-ADRGAMNEVWTPWLPPGGAPARACVEANMADPRHLVEIMVTA 114          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: UPI00200B8FAC (RidA family protein n=1 Tax=Roseomonas sp. NAR14 TaxID=2937791 RepID=UPI00200B8FAC)

HSP 1 Score: 67.8 bits (164), Expect = 6.790e-11
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  332 LHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTA 610
            ++L+ + A DL  D +GQ +QVL++IDA L+A G   +R++SA +++++ + D  A+   W  WL     PA ACV+A  A P  LV I +TA
Sbjct:   23 VYLAGMTADDLSQDVSGQTKQVLDKIDAALEANGTDNTRLLSAQIWLKDIR-DRDAMNKLWTAWLPAGGAPARACVQANMADPRHLVEIMITA 114          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A1F4CVB5_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CVB5_9PROT)

HSP 1 Score: 67.4 bits (163), Expect = 7.950e-11
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  314 VITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTI 598
            V+ G  ++L+ V AK+L  D  GQAR++L +ID +L   G+S+SR++SAT++V + +     V   W  W+  +N PA ACVEA  A P  LV I
Sbjct:   16 VVHGDTVYLAGVVAKNLDNDIKGQAREILAEIDRLLAKCGSSKSRLLSATIWVTDIRNR-APVNEVWSAWVDPKNLPARACVEARLADPRSLVEI 109          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIN0_9STRA4.800e-108100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A812VHP3_9DINO1.230e-2040.17Pdia6 protein n=2 Tax=unclassified Symbiodinium Ta... [more]
A0A484EI82_BRELC3.730e-2041.38Thioredoxin domain-containing protein n=1 Tax=Brem... [more]
A0A813C3A8_9DINO4.210e-2040.17Proline--tRNA ligase n=1 Tax=Symbiodinium necroapp... [more]
A0A812VIT4_SYMMI8.730e-2040.17Proline--tRNA ligase n=2 Tax=Symbiodinium microadr... [more]
A0A813GR85_POLGL1.010e-1937.21Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A196SKN1_BLAHN1.280e-1943.36Thioredoxin-related protein n=1 Tax=Blastocystis s... [more]
H3G8D9_PHYRM7.370e-1939.84Thioredoxin domain-containing protein n=1 Tax=Phyt... [more]
A0A5B8MU99_9CHLO8.590e-1938.24Thioredoxin domain-containing protein n=1 Tax=Chlo... [more]
T0Q3S3_SAPDV9.910e-1640.74Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]

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BLAST of jgi.p|Trimin1|348411 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4L3_9STRA1.680e-113100.00Peroxisomal membrane protein PEX14 n=1 Tax=Tribone... [more]
D8LIY3_ECTSI5.590e-1735.29Peroxisomal membrane protein PEX14 n=1 Tax=Ectocar... [more]
A0A3F2UCK5_9HYPH1.250e-1243.14RidA family protein n=1 Tax=Mesorhizobium sp. YM1C... [more]
A0A7U7ELF3_9PSED1.310e-1239.81Aminoacrylate peracid reductase RutC n=1 Tax=Pseud... [more]
A0A5Q2QE15_9GAMM4.590e-1241.23RidA family protein n=1 Tax=Litoricola lipolytica ... [more]
A0A4P6F7M9_9MICO6.230e-1240.78RidA family protein n=1 Tax=Agromyces protaetiae T... [more]
A0A1H0GGX4_9HYPH1.730e-1142.48Enamine deaminase RidA, house cleaning of reactive... [more]
UPI0010C117603.510e-1143.01RidA family protein n=5 Tax=Roseomonas TaxID=12521... [more]
UPI00200B8FAC6.790e-1139.78RidA family protein n=1 Tax=Roseomonas sp. NAR14 T... [more]
A0A1F4CVB5_9PROT7.950e-1142.11Uncharacterized protein (Fragment) n=1 Tax=Betapro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:1194918..1197245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348411|estExt_Genemark1.C_Ctg_230140
BRITEko00000,ko00001,ko01000,ko03110,ko04131
KEGG Pathwayko04141,map04141
KEGG koko:K01829,ko:K09583,ko:K13984
EC5.3.4.1
Descriptioncell redox homeostasis
COG categoryCO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0526@1|root,KOG0191@2759|Eukaryota
Evalue9.26e-19
Seed ortholog157072.XP_008861948.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-16_002760.1
TranscriptId348733
TrackFilteredModels1
ProteinId348411
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348411gene_4994Tribonema minus UTEX_B_3156 geneContig_23 1194918..1197245 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348411Trimin1|348411|estExt_Genemark1.C_Ctg_230140Tribonema minus UTEX_B_3156 polypeptideContig_23 1195050..1197157 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4994_1exon_4994_1Tribonema minus UTEX_B_3156 exonContig_23 1194918..1195068 +
exon_4994_2exon_4994_2Tribonema minus UTEX_B_3156 exonContig_23 1195186..1195253 +
exon_4994_3exon_4994_3Tribonema minus UTEX_B_3156 exonContig_23 1196180..1196475 +
exon_4994_4exon_4994_4Tribonema minus UTEX_B_3156 exonContig_23 1197058..1197245 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_4994UTR5_4994Tribonema minus UTEX_B_3156 five_prime_UTRContig_23 1194918..1195049 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4994CDS_4994Tribonema minus UTEX_B_3156 CDSContig_23 1195050..1195068 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4994UTR3_4994Tribonema minus UTEX_B_3156 three_prime_UTRContig_23 1197158..1197245 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4994 ID=mRNA_4994|Name=jgi.p|Trimin1|348411|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=703bp|location=Sequence derived from alignment at Contig_23:1194918..1197245+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATCAAGGCTCCGGGAAGGGGAGGGCGTGGCGCTGGGGACAGCAAGGCCTC
CACGTTGGTGTCGAAAAATTTGCATGTTTTAACCTCCATTACATTCGAGC
CCACGGTGCGCTATGGGAAAGGCGGACCCTGGATGCTCGCCTTCACAGCA
AGCTGGTGCAAGCACTGCAAAGTTTTGGCGCCGATCTGGCAGACGGTTGC
TGAGGAGCTGGATGGCCAGGTGTCCTTCGCCTCAATCGACGGCTGGGAGA
ACCGCGCGCTGTCGCGGCGCTTCCACGTCGCGGGCTTCCCCACCATCTTC
TTTGTCGACGCGCGCGGCGACGTGTACGCATTCGCAGGCACCGCGTCCGT
CACCACGCTCAAGGCGTTCGCGCTCGGCGGTTACAGAGACGCGGCGAAAC
TGTCGTCCGCGGGCGCGCCGTTCGGCCTGCGCGGCACGGTGAAGGGGCTG
CTGATTCGGTGGGGCGCGCAGGGGCAGGCGCTGTACGGGGACTTGCTGGC
GGCGGGGGTGCCGAGGTGGGCTGCGCTGCTGGGATTCACCCTGTGCGGCC
TGCTGGTGACTCTCCTCCTGGTGCTGCTCGGGCTCCAGTTCCAGACGCGC
GAGCACCTGGATTGAAGTTGAACCCACCACTCGCTCTTCAGTATGACCCC
AGTGCGACGCCGCGCATGCGAGTGTACGCGGCAACAGCAGCACTTGCCAT
TGC
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protein sequence of jgi.p|Trimin1|348411

>Trimin1|348411|estExt_Genemark1.C_Ctg_230140 ID=Trimin1|348411|estExt_Genemark1.C_Ctg_230140|Name=jgi.p|Trimin1|348411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=161bp
MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVA
GFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLR
GTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLG
LQFQTREHLD*
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mRNA from alignment at Contig_23:1194918..1197245+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4994 ID=mRNA_4994|Name=jgi.p|Trimin1|348411|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2328bp|location=Sequence derived from alignment at Contig_23:1194918..1197245+ (Tribonema minus UTEX_B_3156 )
ATCAAGGCTCCGGGAAGGGGAGGGCGTGGCGCTGGGGACAGCAAGGCCTC CACGTTGGTGTCGAAAAATTTGCATGTTTTAACCTCCATTACATTCGAGC CCACGGTGCGCTATGGGAAAGGCGGACCCTGGATGCTCGCCTTCACAGCA AGTGAGTGCAGCAGGTGTTTTCAAAAAGAAAGTTTGTGACAAATGTGGTG TTGATCTTGCGCGATGTGCATACCGTCTGTGAACGCTTCGCTTGCTGTTG TTGTCTGTGACTGCATAGGCTGGTGCAAGCACTGCAAAGTTTTGGCGCCG ATCTGGCAGACGGTTGCTGAGGAGCTGGATGGCCAGGTGACAAAACACAA TTTTGTCGAAAGTTGAAGTTGAAAAGCGACTCTGTTTTAAAAAAGTGCCC AACAAATATGTATACATTCACTGACAGTGTGCGCAACCACGACATCTATG CCTTTGAAGTGGCCAGGTTCTTTGTATTGGACACGGACAGTGGAGCAGTC AATGCTGACACCGCTGTTCTGCCTTGACTGTAACATGCTCGTCGTGTGCA GCTCTTGCGCTACATAGGCATGTCATGCAAGTCTGGATTATTTAATATTC CTTTATTGTTCAGATGCAGTCGAGCTTGCCGGGTACTCCCTGTGCTCCTG GGCTACACATAACTTCAATCCCCCCCCCCCCCCCCCCCCCCCACATGCCA TATGACCTCCAAAATGGCTCTGGCCTCAGTGGCTATTTCACTCGCCAAGG CGGCCAGTCGTAAGGGCGCGAGCACTGTCGAATTTACATATAGTGTGCAA CTGTTTGACCATGAACAGCAGCGCTGAGGTTACACACACGCTATGTCAGC TCCGGCTGGCGGTGGTATTGGCGTGCTGAGCCCTGCTGTCAGAGTCACAT CAGTCTTGCCCCTTCATGCATCACCATGATGCACTGATCCGTGGCACCGA CGTAGGTGCTGTCGCCGGCTCTCTGTCGCTCCAGTGACCCAGGCGTCACA TGTCACGCAGGACATCTGCGGGTTTCATGCTGCTGCCAACGGTACCCCTT GTCAGAGTCATGGTAGCAAAGCTGCTCTACTCTCTAGGCGCAGACTCCTG GCGCAGATCGCTGAAGATCGACCCCTATCACCGCCACTGCTCAAACTCGC GTCTCCGCGTGCTTGGCGTCATATCATGAAACTGCCGCAGGCTCCCTTGG CTGCTGGACACTGACCCAGCCCCCCCCCCCCCCCCCCTGCTGGGCCCTGC CATGGCCGCCAGGTGTCCTTCGCCTCAATCGACGGCTGGGAGAACCGCGC GCTGTCGCGGCGCTTCCACGTCGCGGGCTTCCCCACCATCTTCTTTGTCG ACGCGCGCGGCGACGTGTACGCATTCGCAGGCACCGCGTCCGTCACCACG CTCAAGGCGTTCGCGCTCGGCGGTTACAGAGACGCGGCGAAACTGTCGTC CGCGGGCGCGCCGTTCGGCCTGCGCGGCACGGTGAAGGGGCTGCTGATTC GGTGGGGCGCGCAGGGGCAGGCGCTGTACGGGGACTTGCTGGCGGCGGGG GTGCCGAGGTATGTTGCTGAGCGCTGCTGATGCAGACGGGGGAAACCCCC TCTTCTGCGTCAAGAGGCGCTGCTGTTAGATTGGTGGGCGATGCATGTCG CATGTGAGCGATAGGGCTATGCCAGGGGCGGGGGCGCCCAGATATGGTGA GCGCTGGTGGTGCAGGGGGGGGAGACTTCCTGTTGTGTATGCACCAGCTG TGCCTGTTAGGTTCGCGGGCGATGCGCGTTCGCCTGTGAGTGATAGGGCT TTGCCAGGGGCATGCATCATGCTATGGCCAGCCCACAGCATACTGTTGCT TGTTTCTTGAAACATGTGGTGCTCGGCCAGTTCATTTGCTGAGCACGTGT CCTGTTCTACCCAAGTTTGCGCCCTCTTGCAGTCTGTGGTTCGTGCAGCA TTGCTGCCACGTGGCATCTGCGCAGCCTTGAACTCAGTGATGTGGGTGAA TCAGGTTGCCCCCCACTCTCGTCTACTGAGTCGGTTCAGCGACATGCTGC CACACCAGAACCGTTCATCTCAGCTGAAATGCGGCTTGTTGTGGTAGCTG TTACTTGCCCCTCATCATCACATATTGCATTCCTGTGCAGGTGGGCTGCG CTGCTGGGATTCACCCTGTGCGGCCTGCTGGTGACTCTCCTCCTGGTGCT GCTCGGGCTCCAGTTCCAGACGCGCGAGCACCTGGATTGAAGTTGAACCC ACCACTCGCTCTTCAGTATGACCCCAGTGCGACGCCGCGCATGCGAGTGT ACGCGGCAACAGCAGCACTTGCCATTGC
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Coding sequence (CDS) from alignment at Contig_23:1194918..1197245+

>mRNA_4994 ID=mRNA_4994|Name=jgi.p|Trimin1|348411|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=483bp|location=Sequence derived from alignment at Contig_23:1194918..1197245+ (Tribonema minus UTEX_B_3156 )
ATGCTCGCCTTCACAGCAAGCTGGTGCAAGCACTGCAAAGTTTTGGCGCC
GATCTGGCAGACGGTTGCTGAGGAGCTGGATGGCCAGGTGTCCTTCGCCT
CAATCGACGGCTGGGAGAACCGCGCGCTGTCGCGGCGCTTCCACGTCGCG
GGCTTCCCCACCATCTTCTTTGTCGACGCGCGCGGCGACGTGTACGCATT
CGCAGGCACCGCGTCCGTCACCACGCTCAAGGCGTTCGCGCTCGGCGGTT
ACAGAGACGCGGCGAAACTGTCGTCCGCGGGCGCGCCGTTCGGCCTGCGC
GGCACGGTGAAGGGGCTGCTGATTCGGTGGGGCGCGCAGGGGCAGGCGCT
GTACGGGGACTTGCTGGCGGCGGGGGTGCCGAGGTGGGCTGCGCTGCTGG
GATTCACCCTGTGCGGCCTGCTGGTGACTCTCCTCCTGGTGCTGCTCGGG
CTCCAGTTCCAGACGCGCGAGCACCTGGATTGA
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