Trimin1|348392|estExt_Genemark1.C_Ctg_230098 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348392
Unique NameTrimin1|348392|estExt_Genemark1.C_Ctg_230098
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length178
Homology
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A835Z3H3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3H3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.050e-82
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query:    1 MQETQDVERDARKKATAAXXXXXXXXXANPKAFAVTRPTAXXXXXXXXXXSPAQPRPWAALRRRSMADVQALPAXXXXXXXXDGTDAAAGAPFVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGNGVLPRPVMLPQMINLLVDLWETEGLYD 177
            MQETQDVERDARKKATAAXXXXXXXXXANPKAFAVTRPTAXXXXXXXXXXSPAQPRPWAALRRRSMADVQALPAXXXXXXXXDGTDAAAGAPFVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGNGVLPRPVMLPQMINLLVDLWETEGLYD
Sbjct:    1 MQETQDVERDARKKATAAXXXXXXXXXANPKAFAVTRPTAXXXXXXXXXXSPAQPRPWAALRRRSMADVQALPAXXXXXXXXDGTDAAAGAPFVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGNGVLPRPVMLPQMINLLVDLWETEGLYD 177          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: D8LBC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC5_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.900e-16
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   93 FVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGN-GVLPRPVMLPQMINLLVDLWETEGLYD 177
            FVN+GL RWE ER+ W+  G                  +A+T+D D +ID +F G+G  G LP+ V LPQMI+LLVDLWE EGL+D
Sbjct:   23 FVNRGLLRWERERKAWLAGGTGGPVGRRRA--------RARTMDVDEVIDDLFSGRGGTGNLPQSVPLPQMIDLLVDLWEAEGLFD 100          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A4D9DFS2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFS2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.540e-13
Identity = 36/97 (37.11%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   84 GTDAAAGAPFVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXX---RKAQTVDTDAIIDTIFVGKGNGVLPRPVMLPQMINLLVDLWETEGLYD 177
            G+  A+   +VN GL+ W   R+ W  K                     ++A++VD D +I++IF   G+  LP+PV L QMI+LLVD WE +GLYD
Sbjct:   39 GSTHASREEYVNSGLKLWSERRREWQSKNNQSEGGGTRSEPPPARSQLPKRARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD 135          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A7S2E517_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E517_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.840e-9
Identity = 38/105 (36.19%), Postives = 48/105 (45.71%), Query Frame = 0
Query:   93 FVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFV----------------GKG------NGVLPRPVMLPQMINLLVDLWETEGL 175
            FVN GL+RWE ER RW+                    R A  +D D +ID +F                 G+G      +G  P PV LPQM+++LVDLWE EGL
Sbjct:   49 FVNVGLQRWEVERARWLSSASLDETHPTNKSVQQQQ-RHAIELDVDEVIDCVFSNRWRQTAQQLPSGGRGGRGFHQKIDDGSFPCPVPLPQMVDILVDLWEAEGL 152          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: W7U1W8_9STRA (DUF4050 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1W8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.310e-8
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  131 KAQTVDTDAIIDTIFVGKGNGVLPRPVMLPQMINLLVDLWETEGLYD 177
            +A++VD D +I++IF   G+  LP+PV L QMI+LLVD WE +GLYD
Sbjct:   67 RARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD 113          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A7S1E125_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E125_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.050e-7
Identity = 32/89 (35.96%), Postives = 41/89 (46.07%), Query Frame = 0
Query:   93 FVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGNGV------LPRPVMLPQMINLLVDLWETEGL 175
            FVNQG  +WE  R +W+                      A+ +D D IID IF  +           P  V LPQM+++LVDLWE EGL
Sbjct:   35 FVNQGFLKWEESRNKWISSTQESNSKTKTG---------AKALDVDEIIDLIFSQRWRSQSPERNQFPEAVPLPQMVDILVDLWEAEGL 114          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A7S2XR72_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XR72_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.300e-7
Identity = 34/100 (34.00%), Postives = 43/100 (43.00%), Query Frame = 0
Query:   93 FVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGK-----------------GNGVLPRPVMLPQMINLLVDLWETEGL 175
            +VN GL  WE  R+ W++K                  R A  +D D IID IF  +                   G    PV LPQM+++LVDLWE EGL
Sbjct:   26 YVNTGLLHWEKGRKHWLRK-KAGSVGEEDKKEEEGEERAAINIDVDEIIDIIFSNRWRVTSPSNSLPGKTTETARGTFAHPVPLPQMVDILVDLWEAEGL 124          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A7S1D623_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D623_CYCTE)

HSP 1 Score: 58.9 bits (141), Expect = 1.340e-7
Identity = 33/89 (37.08%), Postives = 44/89 (49.44%), Query Frame = 0
Query:   93 FVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGNGV------LPRPVMLPQMINLLVDLWETEGL 175
            F+N+GL RWE  R  W++                   + A  +D DAIID IF  +           P+PV L QM+++LVDLWE EGL
Sbjct:  103 FINEGLLRWEESRATWLKSDTSDSTA-----------KAAIPLDVDAIIDLIFSQRWRNQEGEASSFPQPVPLTQMVDILVDLWEAEGL 180          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A7S3KWA5_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWA5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.180e-7
Identity = 37/95 (38.95%), Postives = 45/95 (47.37%), Query Frame = 0
Query:   91 APFVNQGLRRWEAERQRWV-QKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGK------GNGV---LPRPVMLPQMINLLVDLWETEGL 175
            A FVNQGL RWE  R  W+ ++G                   A  +D D IID +F         GN      PR V LPQM+++L DLWE EGL
Sbjct:  104 ASFVNQGLMRWETARSAWLGERGDSDDTGSSARPT-------AVPLDVDKIIDVLFYASSREGRAGNAKPEKFPRNVPLPQMVDILQDLWEAEGL 191          
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Match: A0A6S8ZSI1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZSI1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.630e-6
Identity = 36/106 (33.96%), Postives = 46/106 (43.40%), Query Frame = 0
Query:   93 FVNQGLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXX-RKAQTVDTDAIIDTIFV----------------GKG------NGVLPRPVMLPQMINLLVDLWETEGL 175
            FVN GL+RWE  R +W+                     R A  +D D +ID +F                 GKG      +G  P PV L QM+++LVDLWE EGL
Sbjct:   67 FVNVGLQRWEVVRDQWLSTSTTHDATTEKNHSIYKKMQRHAVELDVDEVIDCVFSNRWRQTAQTSPSGKSSGKGIHQKIDDGSFPCPVPLSQMVDILVDLWEAEGL 172          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348392 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A835Z3H3_9STRA3.050e-82100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LBC5_ECTSI1.900e-1647.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9DFS2_9STRA8.540e-1337.11Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2E517_9STRA5.840e-936.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
W7U1W8_9STRA1.310e-855.32DUF4050 domain-containing protein n=1 Tax=Nannochl... [more]
A0A7S1E125_9STRA1.050e-735.96Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2XR72_9STRA1.300e-734.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1D623_CYCTE1.340e-737.08Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3KWA5_9STRA4.180e-738.95Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A6S8ZSI1_9STRA1.630e-633.96Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:842611..844801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348392mRNA_4959Tribonema minus UTEX_B_3156 mRNAContig_23 842611..844952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348392|estExt_Genemark1.C_Ctg_230098 ID=Trimin1|348392|estExt_Genemark1.C_Ctg_230098|Name=jgi.p|Trimin1|348392|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=178bp
MQETQDVERDARKKATAAARRPAAATTANPKAFAVTRPTAAAAAAAAPPP
SPAQPRPWAALRRRSMADVQALPAAAAAAAAADGTDAAAGAPFVNQGLRR
WEAERQRWVQKGGGGGSAQQQWGRAPPPPRKAQTVDTDAIIDTIFVGKGN
GVLPRPVMLPQMINLLVDLWETEGLYD*
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