mRNA_4937 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A835Z100_9STRA (Glutamate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z100_9STRA) HSP 1 Score: 978 bits (2527), Expect = 0.000e+0 Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 3
Query: 117 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 1553
MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC
Sbjct: 1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 479
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A835YY78_9STRA (Glutamate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY78_9STRA) HSP 1 Score: 657 bits (1695), Expect = 6.520e-230 Identity = 327/495 (66.06%), Postives = 383/495 (77.37%), Query Frame = 3
Query: 117 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTV-----------FDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQ-GEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDS----EHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 1553
M LDGRPRLNLASFVTT+ME AE LM +A+TKNAID+DEYPQTT M QRCVNM+ RLFHAPL+ ++ TGT +GSSEAIMLA LAMKWAWK R KKGL + PNIVFGSN+QV WHKAC YFE+E RE VS D LVLT ERA+PL+DENTIGVC +LGST+NGEYED+KGIHDM+VA N+ W V +HVDAASGGFVAPFL L+WDF+LPNVKSINVSGHKFGLVYAGIGWL+FREK +LHPDLVFHVNYLGGDQ+SFTLNFSKGAGTIVGQYY LLRLG+ GYTQ+MTN SNA +LR+KL+ TGKV+I DK ++PLVA+SLK S + + +QDKL +K WIVPAYTCPPGAE+LAILRVVV+ DFSRDLA+ L+ D++ AMDWLEHHP+ H A G I E+R+ + + K +D R++ PE E PL+ +HH+ S+KTDP HRSTGEKT GVC
Sbjct: 1 MALDGRPRLNLASFVTTKMERAAENLMTEASTKNAIDLDEYPQTTAMQQRCVNMLARLFHAPLDACEDGTGTACVGSSEAIMLATLAMKWAWKERRTKKGLDVSKPNIVFGSNIQVVWHKACKYFEVESREANVSPDCLVLTAERAKPLVDENTIGVCAMLGSTYNGEYEDVKGIHDMLVALNKEKGWEVPLHVDAASGGFVAPFLHDKLVWDFQLPNVKSINVSGHKFGLVYAGIGWLVFREKHNLHPDLVFHVNYLGGDQSSFTLNFSKGAGTIVGQYYNLLRLGRTGYTQVMTNCASNAYYLREKLLETGKVEIHDKAHVPLVAFSLKASIRCGIPPSTPRNRCWPLFMQDKLSNKGWIVPAYTCPPGAEDLAILRVVVRDDFSRDLADALLSDMLKAMDWLEHHPATHHAKHAGHIKEQRQKRRER---KAEDDKARLE--KRAAADAGKPEAEAAAEEEAQPPLIEQHHIHSLKTDPAHRSTGEKTHGVC 490
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: M4C0A7_HYAAE (Glutamate decarboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0A7_HYAAE) HSP 1 Score: 568 bits (1464), Expect = 6.980e-195 Identity = 284/423 (67.14%), Postives = 325/423 (76.83%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLE-HHPSQHAAVQGEINEKREAKHAKHT 1376
DE+ LDG P++NLASFVTT MEPEAE LM KN ID+D+YPQT +H RCV M+ L+HAPLEP Q+ATGTG IGSSEAIMLA LAMK WK R GLP PN+VFGSNVQVCWHK C YFEIE REG VS D LVLT ERA+PLIDENTIGVC +LGSTFNGEYED+K IHDMVVA NEAN W V +HVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE DL DLVFHVNYLGGDQASFTLNFSKGAG ++ QYY +LR G GY IM +M NA+ LR LVATG I DK ++PLVA++L DSS+Y+ FDIQDKL+ + WIVPAYTC GA+ L I+RVVVKQ+FS +A LV DI+ A+D LE HH AA+ EK+ + HT
Sbjct: 53 DELALDGNPKMNLASFVTTYMEPEAEDLMVQGLRKNYIDLDQYPQTAEIHNRCVTMLANLYHAPLEPNQKATGTGCIGSSEAIMLAGLAMKRRWKERRVAAGLPYDKPNMVFGSNVQVCWHKMCKYFEIENREGDVSPDCLVLTAERAQPLIDENTIGVCAILGSTFNGEYEDVKAIHDMVVAMNEANGWDVPVHVDAASGGFIAPFINPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPDDLVFHVNYLGGDQASFTLNFSKGAGNVIAQYYNMLRFGFDGYRHIMEASMKNAELLRGALVATGHFRIVDKQHMPLVAFTLIDSSRYSCFDIQDKLKSRGWIVPAYTCSRGADSLVIMRVVVKQNFSSHMANMLVQDILKAIDGLEKHHVLVDAAMSSPKAEKKHFRDIVHT 475
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: K3WHQ2_GLOUD (Glutamate decarboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHQ2_GLOUD) HSP 1 Score: 557 bits (1435), Expect = 2.320e-190 Identity = 285/481 (59.25%), Postives = 339/481 (70.48%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 1553
DE+ LDG P++NLASFVTT MEPEA+ LM + KN ID+D+YPQ+ +H RCV ++ LFHAPL P + ATGTG IGSSEAIMLA LAMK WK R GLP NPN+VFGSNVQVCWHK C YFEIE RE VS D LVLT ERA PL+DENTIGV +LGSTFNGEYED+K IHDM+V +NE N W + +HVDAASGGF+APFL P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+REK DL DLVFHVNYLGGDQ SFTLNFSKGAG +V QYY +LR G GY +IM +M NA++LR LVATG I DK ++PLVA+SL DSS+YT FDIQDKLR + WIVPAYTC GAE L I+RVVVKQ+FS ++A LV DI+ A+D LE H HV+ T++ S A + + + +++ + KH+++G T GVC
Sbjct: 62 DELALDGNPKMNLASFVTTYMEPEADDLMVEGLRKNYIDLDQYPQSAEIHNRCVQILANLFHAPLAPGEIATGTGCIGSSEAIMLAGLAMKRKWKDRRKAAGLPTDNPNMVFGSNVQVCWHKMCKYFEIEIREADVSPDCLVLTAERARPLLDENTIGVSAILGSTFNGEYEDVKAIHDMIVEENEKNGWQIGLHVDAASGGFIAPFLNPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREKEDLPEDLVFHVNYLGGDQQSFTLNFSKGAGNVVTQYYNILRFGFDGYRRIMEASMENAEYLRSSLVATGHFRIVDKQHMPLVAFSLIDSSRYTCFDIQDKLRSRGWIVPAYTCSRGAESLVIMRVVVKQNFSYNMANMLVHDILKAIDVLEKH-------------------------------------HVLVDTAM---SSPKAKKMDFREAVHAIQANLKHQNSGITTHGVC 502
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A8K1C3X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3X5_PYTOL) HSP 1 Score: 556 bits (1433), Expect = 6.150e-190 Identity = 269/399 (67.42%), Postives = 315/399 (78.95%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHH 1307
DE+ LDG P++NLASFVTT MEPEA+ LM + KN ID+D+YPQT +H RCV M+ L+HAPL+P ++ATGTG IGSSEAIMLA LAMK WK R GLP PN+VFGSNVQVCWHK C YFE+E RE VS D LVLT +RA PL+DENTIG+C +LGSTFNGEYED+K IHDMV NE +DW + IHVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAGIGW ++REK DL DLVFHVNYLGGDQ SFTLNFSKGAG +V QYY +LR G GY +IM +M NA++LR LVATG I DK ++PLVA++L DSS+YT FDIQDKL+ + WIVPAYTC GAE L I+RVVVKQ+FS ++A LV DI+ A+D LE H
Sbjct: 70 DELALDGNPKMNLASFVTTYMEPEADDLMVEGLRKNYIDLDQYPQTAEIHNRCVQMLANLYHAPLQPGEQATGTGCIGSSEAIMLAGLAMKRKWKDRRIAAGLPYDKPNMVFGSNVQVCWHKMCKYFEVEIREADVSPDCLVLTADRARPLLDENTIGICAILGSTFNGEYEDVKEIHDMVAEVNEKHDWHIPIHVDAASGGFIAPFINPELEWDFRLPNVKSINVSGHKFGLVYAGIGWAVWREKEDLPEDLVFHVNYLGGDQQSFTLNFSKGAGNVVAQYYNILRFGFEGYKRIMEASMENAEYLRSSLVATGHFRIVDKQHMPLVAFALIDSSRYTCFDIQDKLKSRGWIVPAYTCSRGAESLTIMRVVVKQNFSYNMANMLVHDILKAIDALEKH 468
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A484E0T4_BRELC (Glutamate decarboxylase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0T4_BRELC) HSP 1 Score: 554 bits (1428), Expect = 1.940e-189 Identity = 282/485 (58.14%), Postives = 337/485 (69.48%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHL----FSMKTDPKHRSTGEKTFGVC 1553
DE+ LDG P++NLASFVTT MEPEAE LM + KN ID+D+YPQT +H RCV M+ L+HAPLEP Q ATGTG +GSSEAIMLA LAMK WK R GLP PN+VFGSNVQVCWHK C YFEI+ RE VS + LVLT +RA L+DENTIGV +LGSTFNGEYED+K IHDM+ +NE N W + +HVDAASGGF+APF+ PDL+WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE DL DLVFHVNYLGGDQASFTLNFSKGAG +V QYY +LR G GY +IM +M NAQ LR LVATG + DK ++PLVA++L DSS+Y+ FDIQDKL+ + WIVPAYTC GAE L I+RVVVKQ+FS +A LV DI+ A++ LE H H++ +++ AAP + K HL S+ + KHR +G+ T GVC
Sbjct: 53 DELALDGNPKMNLASFVTTYMEPEAEDLMVEGLRKNFIDLDQYPQTAEIHNRCVTMLANLYHAPLEPGQTATGTGCVGSSEAIMLAGLAMKRKWKDRRIAAGLPYDKPNMVFGSNVQVCWHKMCKYFEIDIREADVSPECLVLTADRARALLDENTIGVSAILGSTFNGEYEDVKAIHDMIDEENEKNGWAIPLHVDAASGGFIAPFISPDLVWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPEDLVFHVNYLGGDQASFTLNFSKGAGNVVAQYYNMLRFGFEGYRRIMEASMQNAQLLRSALVATGHFRVVDKQHMPLVAFALIDSSRYSCFDIQDKLKSRGWIVPAYTCSSGAESLVIMRVVVKQNFSSHMANMLVQDILKAIETLEKH-------------------------------------HLLIDSAM-------AAPKVEKTHLKDIVHSLTNNAKHRQSGKTTHGVC 493
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: G4YNZ2_PHYSP (Glutamate decarboxylase n=13 Tax=Peronosporaceae TaxID=4777 RepID=G4YNZ2_PHYSP) HSP 1 Score: 552 bits (1422), Expect = 1.560e-188 Identity = 284/485 (58.56%), Postives = 337/485 (69.48%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHH----LFSMKTDPKHRSTGEKTFGVC 1553
DE+ LDG P++NLASFVTT MEPEAE LM + KN ID+D+YPQT +H RCV M+ L+HAPLEP Q+ATGTG IGSSEAIMLA LAMK WK R GLP PN+VFGSNVQVCWHK C YFEIE RE VS D LVLT +RA LIDENTIGV +LGSTFNGEYED+K IHDM+V +NE N W + +HVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE DL DLVFHVNYLGGDQ+SFTLNFSKGAG +V QYY +LR G GY +IM +M NAQ LR LVATG I DK ++PLVA++L DSS+YT FDIQDKL+ + WIVPAYTC GAE L I+RVVVKQ+FS +A LV DI+ A++ LE H HV+ T++ ++P K H + +++ + KH+ +G T GVC
Sbjct: 53 DELALDGNPKMNLASFVTTYMEPEAEDLMVEGLRKNYIDLDQYPQTAEIHNRCVTMLANLYHAPLEPGQKATGTGCIGSSEAIMLAGLAMKRRWKDRRIAAGLPYDKPNMVFGSNVQVCWHKMCKYFEIEIREADVSPDCLVLTAKRARALIDENTIGVSAILGSTFNGEYEDVKSIHDMLVEENERNGWNIPLHVDAASGGFIAPFISPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPDDLVFHVNYLGGDQSSFTLNFSKGAGNVVAQYYNMLRFGFEGYRRIMEASMENAQLLRGALVATGHFRIVDKQHMPLVAFALIDSSRYTCFDIQDKLKSRGWIVPAYTCSSGAESLTIMRVVVKQNFSSHMANMLVQDILKAIEALEQH-------------------------------------HVLVDTAM-------SSPKAQKKHFKDIVHALQANLKHQQSGLTTHGVC 493
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A5D6Y3D2_9STRA (Glutamate decarboxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3D2_9STRA) HSP 1 Score: 551 bits (1419), Expect = 5.280e-188 Identity = 281/481 (58.42%), Postives = 341/481 (70.89%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 1553
DE+ LDG P++NLASFVTT MEPEA+ LM + KN ID+D+YPQT +H RCV ++ LF+APL P + ATGTG IGSSEAIMLA LAMK W+ R GLP NPN+VFGSNVQVCWHK C YFEIE RE VS D LVLTP RA PLIDENTIGV +LGSTFNGEYED+ GIHDM+V N AN W V +HVDAASGGF+APFL+P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+REK+DL DLVFHVNYLGGDQ+SFTLNFSKGAG +V QYY +LR G GY +IM +M NA++LR LVATG I DK ++PLVA++L D+S+++ FDIQDKLR + WIVPAYTC GAE L I+RVVVKQ+FS ++A LV DI+ A+D LE H H++ T++ S A + + + +++ + KH+++G T GVC
Sbjct: 58 DELALDGNPKMNLASFVTTYMEPEADDLMIEGLRKNYIDLDQYPQTAEIHNRCVQILANLFNAPLAPGELATGTGCIGSSEAIMLAGLAMKRKWRDRRKAAGLPFDNPNMVFGSNVQVCWHKMCRYFEIEIREADVSPDCLVLTPARARPLIDENTIGVSAILGSTFNGEYEDVLGIHDMLVELNAANGWNVPLHVDAASGGFIAPFLDPELAWDFRLPNVKSINVSGHKFGLVYAGMGWALWREKSDLPDDLVFHVNYLGGDQSSFTLNFSKGAGNVVAQYYNILRFGFDGYRRIMEASMENAEYLRSALVATGHFRIVDKQHMPLVAFTLLDASRFSCFDIQDKLRSRGWIVPAYTCSRGAESLVIMRVVVKQNFSYNMANMLVHDILKAIDALEKH-------------------------------------HILVDTAM---SSPKAKKMQFRDAVHALQANLKHQTSGVTTHGVC 498
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A1Y2CEZ6_9FUNG (Glutamate decarboxylase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CEZ6_9FUNG) HSP 1 Score: 549 bits (1414), Expect = 3.010e-187 Identity = 288/484 (59.50%), Postives = 342/484 (70.66%), Query Frame = 3
Query: 108 SDEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEA-TGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPK-HRSTGEKTFGVC 1553
SD + LDG P LN+ASFVTT M+ EAE LM + KN ID+DEY QT +H RCV MI LFHAP P+ GTG IGSSEAIML VLAMKW W+ R ++GLPA PN+V GSNVQVCWHKAC YFE+E RE VS D LVLT ERA PLI+ENTIGVC +LGSTFNGE+E++K IHDMVV N N W + IHVDAASGGF+APF +PDLLWDFRLPNVKSINVSGHKFGLVYAGIGW L+RE DL +LVFHVNYLGGDQASFTLNFSKG+ T++GQYY L+RLGK GY +IM M+NA +LRQKL G I DKG++PLVA++LKD+SKYTVFDIQD+++ + WI+PAYTC GAE LAI+RVVVKQ+FS+ A+ LV + A+ +LEH A +G H +K++A AM V+ S L H S T + HR T ++T GVC
Sbjct: 50 SDILSLDGNPTLNMASFVTTFMDEEAEELMMEGMRKNFIDLDEYEQTAELHNRCVAMIANLFHAPTPPKNMPHPGTGTIGSSEAIMLCVLAMKWRWRKRRQEQGLPADKPNLVCGSNVQVCWHKACRYFEVECREADVSPDCLVLTAERALPLINENTIGVCPILGSTFNGEFENVKEIHDMVVELNATNGWAIPIHVDAASGGFIAPFTDPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWALWREPQDLPEELVFHVNYLGGDQASFTLNFSKGSSTVIGQYYNLIRLGKEGYRKIMLAGMANATYLRQKLQDMGLFTIVDKGHMPLVAFALKDASKYTVFDIQDRMKHQGWIIPAYTCSKGAESLAIMRVVVKQNFSQAFADMLVQHLEDAIRYLEH-----LAAEG------------HLLHVKELA----VAMDVIESKRLV--------------HSHSKNTGKQSHRKTEDRTHGVC 498
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: H3G979_PHYRM (Glutamate decarboxylase n=6 Tax=Peronosporaceae TaxID=4777 RepID=H3G979_PHYRM) HSP 1 Score: 546 bits (1406), Expect = 8.700e-187 Identity = 269/399 (67.42%), Postives = 312/399 (78.20%), Query Frame = 3
Query: 111 DEMVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHH 1307
DE+ LDG P++NLASFVTT MEPEAE LM + KN ID+D+YPQT +H RCV M+ L+HAPL+P Q+ATGTG IGSSEAIMLA LAMK WK R GL PN+VFGSNVQVCWHK C YFEIE RE VS D LVLT +RA L+DENTIGV +LGSTFNGEYED+K IHDM+VA+NEAN W + +HVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE DL DLVFHVNYLGGDQ+SFTLNFSKGAG +V QYY +LR G GY +IM +M NA LR LVATG I DK ++PLVA++L DSS+YT FDIQDKL+ + WIVPAYTC GAE L I+RVVVKQ+FS +A LV DI+ A++ LE H
Sbjct: 26 DELALDGNPKMNLASFVTTYMEPEAEDLMIEGLRKNYIDLDQYPQTAEIHNRCVTMLANLYHAPLQPGQQATGTGCIGSSEAIMLAGLAMKRRWKDRRIAAGLSYDKPNMVFGSNVQVCWHKMCKYFEIEIREADVSPDCLVLTAKRARALLDENTIGVSAILGSTFNGEYEDVKSIHDMLVAENEANGWSIPLHVDAASGGFIAPFISPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPDDLVFHVNYLGGDQSSFTLNFSKGAGNVVAQYYNMLRFGFDGYRRIMEASMENAFLLRGALVATGHFRIVDKQHMPLVAFALIDSSRYTCFDIQDKLKSRGWIVPAYTCSSGAEALTIMRVVVKQNFSSHMANMLVQDIMKAIEALEKH 424 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4937 ID=mRNA_4937|Name=jgi.p|Trimin1|348380|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2073bp|location=Sequence derived from alignment at Contig_23:654253..665169- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TTCAGAGGTTTTCCCCTACTTCCTGAGCCGCGGGACGAGGTCGAGCTCCGback to top protein sequence of jgi.p|Trimin1|348380 >Trimin1|348380|estExt_Genemark1.C_Ctg_230075 ID=Trimin1|348380|estExt_Genemark1.C_Ctg_230075|Name=jgi.p|Trimin1|348380|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=480bp MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRback to top mRNA from alignment at Contig_23:654253..665169- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4937 ID=mRNA_4937|Name=jgi.p|Trimin1|348380|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10917bp|location=Sequence derived from alignment at Contig_23:654253..665169- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_23:654253..665169- >mRNA_4937 ID=mRNA_4937|Name=jgi.p|Trimin1|348380|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1440bp|location=Sequence derived from alignment at Contig_23:654253..665169- (Tribonema minus UTEX_B_3156 )back to top |