Trimin1|348380|estExt_Genemark1.C_Ctg_230075 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348380
Unique NameTrimin1|348380|estExt_Genemark1.C_Ctg_230075
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length480
Homology
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A835Z100_9STRA (Glutamate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z100_9STRA)

HSP 1 Score: 978 bits (2527), Expect = 0.000e+0
Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 479
            MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC
Sbjct:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 479          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A835YY78_9STRA (Glutamate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY78_9STRA)

HSP 1 Score: 657 bits (1695), Expect = 2.770e-233
Identity = 327/495 (66.06%), Postives = 383/495 (77.37%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTV-----------FDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQ-GEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDS----EHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 479
            M LDGRPRLNLASFVTT+ME  AE LM +A+TKNAID+DEYPQTT M QRCVNM+ RLFHAPL+  ++ TGT  +GSSEAIMLA LAMKWAWK  R KKGL  + PNIVFGSN+QV WHKAC YFE+E RE  VS D LVLT ERA+PL+DENTIGVC +LGST+NGEYED+KGIHDM+VA N+   W V +HVDAASGGFVAPFL   L+WDF+LPNVKSINVSGHKFGLVYAGIGWL+FREK +LHPDLVFHVNYLGGDQ+SFTLNFSKGAGTIVGQYY LLRLG+ GYTQ+MTN  SNA +LR+KL+ TGKV+I DK ++PLVA+SLK S +  +             +QDKL +K WIVPAYTCPPGAE+LAILRVVV+ DFSRDLA+ L+ D++ AMDWLEHHP+ H A   G I E+R+ +  +   K +D   R++           PE      E    PL+ +HH+ S+KTDP HRSTGEKT GVC
Sbjct:    1 MALDGRPRLNLASFVTTKMERAAENLMTEASTKNAIDLDEYPQTTAMQQRCVNMLARLFHAPLDACEDGTGTACVGSSEAIMLATLAMKWAWKERRTKKGLDVSKPNIVFGSNIQVVWHKACKYFEVESREANVSPDCLVLTAERAKPLVDENTIGVCAMLGSTYNGEYEDVKGIHDMLVALNKEKGWEVPLHVDAASGGFVAPFLHDKLVWDFQLPNVKSINVSGHKFGLVYAGIGWLVFREKHNLHPDLVFHVNYLGGDQSSFTLNFSKGAGTIVGQYYNLLRLGRTGYTQVMTNCASNAYYLREKLLETGKVEIHDKAHVPLVAFSLKASIRCGIPPSTPRNRCWPLFMQDKLSNKGWIVPAYTCPPGAEDLAILRVVVRDDFSRDLADALLSDMLKAMDWLEHHPATHHAKHAGHIKEQRQKRRER---KAEDDKARLE--KRAAADAGKPEAEAAAEEEAQPPLIEQHHIHSLKTDPAHRSTGEKTHGVC 490          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: M4C0A7_HYAAE (Glutamate decarboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0A7_HYAAE)

HSP 1 Score: 563 bits (1452), Expect = 2.530e-196
Identity = 282/421 (66.98%), Postives = 323/421 (76.72%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLE-HHPSQHAAVQGEINEKREAKHAKHT 420
            + LDG P++NLASFVTT MEPEAE LM     KN ID+D+YPQT  +H RCV M+  L+HAPLEP Q+ATGTG IGSSEAIMLA LAMK  WK  R   GLP   PN+VFGSNVQVCWHK C YFEIE REG VS D LVLT ERA+PLIDENTIGVC +LGSTFNGEYED+K IHDMVVA NEAN W V +HVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE  DL  DLVFHVNYLGGDQASFTLNFSKGAG ++ QYY +LR G  GY  IM  +M NA+ LR  LVATG   I DK ++PLVA++L DSS+Y+ FDIQDKL+ + WIVPAYTC  GA+ L I+RVVVKQ+FS  +A  LV DI+ A+D LE HH    AA+     EK+  +   HT
Sbjct:   55 LALDGNPKMNLASFVTTYMEPEAEDLMVQGLRKNYIDLDQYPQTAEIHNRCVTMLANLYHAPLEPNQKATGTGCIGSSEAIMLAGLAMKRRWKERRVAAGLPYDKPNMVFGSNVQVCWHKMCKYFEIENREGDVSPDCLVLTAERAQPLIDENTIGVCAILGSTFNGEYEDVKAIHDMVVAMNEANGWDVPVHVDAASGGFIAPFINPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPDDLVFHVNYLGGDQASFTLNFSKGAGNVIAQYYNMLRFGFDGYRHIMEASMKNAELLRGALVATGHFRIVDKQHMPLVAFTLIDSSRYSCFDIQDKLKSRGWIVPAYTCSRGADSLVIMRVVVKQNFSSHMANMLVQDILKAIDGLEKHHVLVDAAMSSPKAEKKHFRDIVHT 475          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: K3WHQ2_GLOUD (Glutamate decarboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHQ2_GLOUD)

HSP 1 Score: 553 bits (1424), Expect = 6.160e-192
Identity = 283/479 (59.08%), Postives = 337/479 (70.35%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 479
            + LDG P++NLASFVTT MEPEA+ LM +   KN ID+D+YPQ+  +H RCV ++  LFHAPL P + ATGTG IGSSEAIMLA LAMK  WK  R   GLP  NPN+VFGSNVQVCWHK C YFEIE RE  VS D LVLT ERA PL+DENTIGV  +LGSTFNGEYED+K IHDM+V +NE N W + +HVDAASGGF+APFL P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+REK DL  DLVFHVNYLGGDQ SFTLNFSKGAG +V QYY +LR G  GY +IM  +M NA++LR  LVATG   I DK ++PLVA+SL DSS+YT FDIQDKLR + WIVPAYTC  GAE L I+RVVVKQ+FS ++A  LV DI+ A+D LE H                                     HV+  T++   S   A  +  +  + +++ + KH+++G  T GVC
Sbjct:   64 LALDGNPKMNLASFVTTYMEPEADDLMVEGLRKNYIDLDQYPQSAEIHNRCVQILANLFHAPLAPGEIATGTGCIGSSEAIMLAGLAMKRKWKDRRKAAGLPTDNPNMVFGSNVQVCWHKMCKYFEIEIREADVSPDCLVLTAERARPLLDENTIGVSAILGSTFNGEYEDVKAIHDMIVEENEKNGWQIGLHVDAASGGFIAPFLNPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREKEDLPEDLVFHVNYLGGDQQSFTLNFSKGAGNVVTQYYNILRFGFDGYRRIMEASMENAEYLRSSLVATGHFRIVDKQHMPLVAFSLIDSSRYTCFDIQDKLRSRGWIVPAYTCSRGAESLVIMRVVVKQNFSYNMANMLVHDILKAIDVLEKH-------------------------------------HVLVDTAM---SSPKAKKMDFREAVHAIQANLKHQNSGITTHGVC 502          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A8K1C3X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3X5_PYTOL)

HSP 1 Score: 551 bits (1421), Expect = 2.320e-191
Identity = 267/397 (67.25%), Postives = 313/397 (78.84%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHH 397
            + LDG P++NLASFVTT MEPEA+ LM +   KN ID+D+YPQT  +H RCV M+  L+HAPL+P ++ATGTG IGSSEAIMLA LAMK  WK  R   GLP   PN+VFGSNVQVCWHK C YFE+E RE  VS D LVLT +RA PL+DENTIG+C +LGSTFNGEYED+K IHDMV   NE +DW + IHVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAGIGW ++REK DL  DLVFHVNYLGGDQ SFTLNFSKGAG +V QYY +LR G  GY +IM  +M NA++LR  LVATG   I DK ++PLVA++L DSS+YT FDIQDKL+ + WIVPAYTC  GAE L I+RVVVKQ+FS ++A  LV DI+ A+D LE H
Sbjct:   72 LALDGNPKMNLASFVTTYMEPEADDLMVEGLRKNYIDLDQYPQTAEIHNRCVQMLANLYHAPLQPGEQATGTGCIGSSEAIMLAGLAMKRKWKDRRIAAGLPYDKPNMVFGSNVQVCWHKMCKYFEVEIREADVSPDCLVLTADRARPLLDENTIGICAILGSTFNGEYEDVKEIHDMVAEVNEKHDWHIPIHVDAASGGFIAPFINPELEWDFRLPNVKSINVSGHKFGLVYAGIGWAVWREKEDLPEDLVFHVNYLGGDQQSFTLNFSKGAGNVVAQYYNILRFGFEGYKRIMEASMENAEYLRSSLVATGHFRIVDKQHMPLVAFALIDSSRYTCFDIQDKLKSRGWIVPAYTCSRGAESLTIMRVVVKQNFSYNMANMLVHDILKAIDALEKH 468          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A484E0T4_BRELC (Glutamate decarboxylase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0T4_BRELC)

HSP 1 Score: 550 bits (1417), Expect = 5.190e-191
Identity = 280/483 (57.97%), Postives = 335/483 (69.36%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHL----FSMKTDPKHRSTGEKTFGVC 479
            + LDG P++NLASFVTT MEPEAE LM +   KN ID+D+YPQT  +H RCV M+  L+HAPLEP Q ATGTG +GSSEAIMLA LAMK  WK  R   GLP   PN+VFGSNVQVCWHK C YFEI+ RE  VS + LVLT +RA  L+DENTIGV  +LGSTFNGEYED+K IHDM+  +NE N W + +HVDAASGGF+APF+ PDL+WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE  DL  DLVFHVNYLGGDQASFTLNFSKGAG +V QYY +LR G  GY +IM  +M NAQ LR  LVATG   + DK ++PLVA++L DSS+Y+ FDIQDKL+ + WIVPAYTC  GAE L I+RVVVKQ+FS  +A  LV DI+ A++ LE H                                     H++  +++       AAP + K HL     S+  + KHR +G+ T GVC
Sbjct:   55 LALDGNPKMNLASFVTTYMEPEAEDLMVEGLRKNFIDLDQYPQTAEIHNRCVTMLANLYHAPLEPGQTATGTGCVGSSEAIMLAGLAMKRKWKDRRIAAGLPYDKPNMVFGSNVQVCWHKMCKYFEIDIREADVSPECLVLTADRARALLDENTIGVSAILGSTFNGEYEDVKAIHDMIDEENEKNGWAIPLHVDAASGGFIAPFISPDLVWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPEDLVFHVNYLGGDQASFTLNFSKGAGNVVAQYYNMLRFGFEGYRRIMEASMQNAQLLRSALVATGHFRVVDKQHMPLVAFALIDSSRYSCFDIQDKLKSRGWIVPAYTCSSGAESLVIMRVVVKQNFSSHMANMLVQDILKAIETLEKH-------------------------------------HLLIDSAM-------AAPKVEKTHLKDIVHSLTNNAKHRQSGKTTHGVC 493          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: G4YNZ2_PHYSP (Glutamate decarboxylase n=13 Tax=Peronosporaceae TaxID=4777 RepID=G4YNZ2_PHYSP)

HSP 1 Score: 548 bits (1411), Expect = 4.220e-190
Identity = 282/483 (58.39%), Postives = 335/483 (69.36%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHH----LFSMKTDPKHRSTGEKTFGVC 479
            + LDG P++NLASFVTT MEPEAE LM +   KN ID+D+YPQT  +H RCV M+  L+HAPLEP Q+ATGTG IGSSEAIMLA LAMK  WK  R   GLP   PN+VFGSNVQVCWHK C YFEIE RE  VS D LVLT +RA  LIDENTIGV  +LGSTFNGEYED+K IHDM+V +NE N W + +HVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE  DL  DLVFHVNYLGGDQ+SFTLNFSKGAG +V QYY +LR G  GY +IM  +M NAQ LR  LVATG   I DK ++PLVA++L DSS+YT FDIQDKL+ + WIVPAYTC  GAE L I+RVVVKQ+FS  +A  LV DI+ A++ LE H                                     HV+  T++       ++P   K H    + +++ + KH+ +G  T GVC
Sbjct:   55 LALDGNPKMNLASFVTTYMEPEAEDLMVEGLRKNYIDLDQYPQTAEIHNRCVTMLANLYHAPLEPGQKATGTGCIGSSEAIMLAGLAMKRRWKDRRIAAGLPYDKPNMVFGSNVQVCWHKMCKYFEIEIREADVSPDCLVLTAKRARALIDENTIGVSAILGSTFNGEYEDVKSIHDMLVEENERNGWNIPLHVDAASGGFIAPFISPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPDDLVFHVNYLGGDQSSFTLNFSKGAGNVVAQYYNMLRFGFEGYRRIMEASMENAQLLRGALVATGHFRIVDKQHMPLVAFALIDSSRYTCFDIQDKLKSRGWIVPAYTCSSGAESLTIMRVVVKQNFSSHMANMLVQDILKAIEALEQH-------------------------------------HVLVDTAM-------SSPKAQKKHFKDIVHALQANLKHQQSGLTTHGVC 493          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A5D6Y3D2_9STRA (Glutamate decarboxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3D2_9STRA)

HSP 1 Score: 546 bits (1408), Expect = 1.430e-189
Identity = 279/479 (58.25%), Postives = 339/479 (70.77%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPKHRSTGEKTFGVC 479
            + LDG P++NLASFVTT MEPEA+ LM +   KN ID+D+YPQT  +H RCV ++  LF+APL P + ATGTG IGSSEAIMLA LAMK  W+  R   GLP  NPN+VFGSNVQVCWHK C YFEIE RE  VS D LVLTP RA PLIDENTIGV  +LGSTFNGEYED+ GIHDM+V  N AN W V +HVDAASGGF+APFL+P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+REK+DL  DLVFHVNYLGGDQ+SFTLNFSKGAG +V QYY +LR G  GY +IM  +M NA++LR  LVATG   I DK ++PLVA++L D+S+++ FDIQDKLR + WIVPAYTC  GAE L I+RVVVKQ+FS ++A  LV DI+ A+D LE H                                     H++  T++   S   A  +  +  + +++ + KH+++G  T GVC
Sbjct:   60 LALDGNPKMNLASFVTTYMEPEADDLMIEGLRKNYIDLDQYPQTAEIHNRCVQILANLFNAPLAPGELATGTGCIGSSEAIMLAGLAMKRKWRDRRKAAGLPFDNPNMVFGSNVQVCWHKMCRYFEIEIREADVSPDCLVLTPARARPLIDENTIGVSAILGSTFNGEYEDVLGIHDMLVELNAANGWNVPLHVDAASGGFIAPFLDPELAWDFRLPNVKSINVSGHKFGLVYAGMGWALWREKSDLPDDLVFHVNYLGGDQSSFTLNFSKGAGNVVAQYYNILRFGFDGYRRIMEASMENAEYLRSALVATGHFRIVDKQHMPLVAFTLLDASRFSCFDIQDKLRSRGWIVPAYTCSRGAESLVIMRVVVKQNFSYNMANMLVHDILKAIDALEKH-------------------------------------HILVDTAM---SSPKAKKMQFRDAVHALQANLKHQTSGVTTHGVC 498          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: A0A1Y2CEZ6_9FUNG (Glutamate decarboxylase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CEZ6_9FUNG)

HSP 1 Score: 546 bits (1407), Expect = 2.030e-189
Identity = 286/479 (59.71%), Postives = 339/479 (70.77%), Query Frame = 0
Query:    3 LDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEA-TGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQHAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGAAPLLSKHHLFSMKTDPK-HRSTGEKTFGVC 479
            LDG P LN+ASFVTT M+ EAE LM +   KN ID+DEY QT  +H RCV MI  LFHAP  P+     GTG IGSSEAIML VLAMKW W+  R ++GLPA  PN+V GSNVQVCWHKAC YFE+E RE  VS D LVLT ERA PLI+ENTIGVC +LGSTFNGE+E++K IHDMVV  N  N W + IHVDAASGGF+APF +PDLLWDFRLPNVKSINVSGHKFGLVYAGIGW L+RE  DL  +LVFHVNYLGGDQASFTLNFSKG+ T++GQYY L+RLGK GY +IM   M+NA +LRQKL   G   I DKG++PLVA++LKD+SKYTVFDIQD+++ + WI+PAYTC  GAE LAI+RVVVKQ+FS+  A+ LV  +  A+ +LEH      A +G            H   +K++A     AM V+ S  L               H  S  T  + HR T ++T GVC
Sbjct:   55 LDGNPTLNMASFVTTFMDEEAEELMMEGMRKNFIDLDEYEQTAELHNRCVAMIANLFHAPTPPKNMPHPGTGTIGSSEAIMLCVLAMKWRWRKRRQEQGLPADKPNLVCGSNVQVCWHKACRYFEVECREADVSPDCLVLTAERALPLINENTIGVCPILGSTFNGEFENVKEIHDMVVELNATNGWAIPIHVDAASGGFIAPFTDPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWALWREPQDLPEELVFHVNYLGGDQASFTLNFSKGSSTVIGQYYNLIRLGKEGYRKIMLAGMANATYLRQKLQDMGLFTIVDKGHMPLVAFALKDASKYTVFDIQDRMKHQGWIIPAYTCSKGAESLAIMRVVVKQNFSQAFADMLVQHLEDAIRYLEH-----LAAEG------------HLLHVKELA----VAMDVIESKRLV--------------HSHSKNTGKQSHRKTEDRTHGVC 498          
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Match: H3G979_PHYRM (Glutamate decarboxylase n=6 Tax=Peronosporaceae TaxID=4777 RepID=H3G979_PHYRM)

HSP 1 Score: 541 bits (1394), Expect = 3.410e-188
Identity = 267/397 (67.25%), Postives = 310/397 (78.09%), Query Frame = 0
Query:    1 MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQRCVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKGLPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLIDENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGGFVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPDLVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMSNAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNWIVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHH 397
            + LDG P++NLASFVTT MEPEAE LM +   KN ID+D+YPQT  +H RCV M+  L+HAPL+P Q+ATGTG IGSSEAIMLA LAMK  WK  R   GL    PN+VFGSNVQVCWHK C YFEIE RE  VS D LVLT +RA  L+DENTIGV  +LGSTFNGEYED+K IHDM+VA+NEAN W + +HVDAASGGF+APF+ P+L WDFRLPNVKSINVSGHKFGLVYAG+GW L+RE  DL  DLVFHVNYLGGDQ+SFTLNFSKGAG +V QYY +LR G  GY +IM  +M NA  LR  LVATG   I DK ++PLVA++L DSS+YT FDIQDKL+ + WIVPAYTC  GAE L I+RVVVKQ+FS  +A  LV DI+ A++ LE H
Sbjct:   28 LALDGNPKMNLASFVTTYMEPEAEDLMIEGLRKNYIDLDQYPQTAEIHNRCVTMLANLYHAPLQPGQQATGTGCIGSSEAIMLAGLAMKRRWKDRRIAAGLSYDKPNMVFGSNVQVCWHKMCKYFEIEIREADVSPDCLVLTAKRARALLDENTIGVSAILGSTFNGEYEDVKSIHDMLVAENEANGWSIPLHVDAASGGFIAPFISPELEWDFRLPNVKSINVSGHKFGLVYAGMGWALWREPEDLPDDLVFHVNYLGGDQSSFTLNFSKGAGNVVAQYYNMLRFGFDGYRRIMEASMENAFLLRGALVATGHFRIVDKQHMPLVAFALIDSSRYTCFDIQDKLKSRGWIVPAYTCSSGAEALTIMRVVVKQNFSSHMANMLVQDIMKAIEALEKH 424          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348380 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z100_9STRA0.000e+0100.00Glutamate decarboxylase n=1 Tax=Tribonema minus Ta... [more]
A0A835YY78_9STRA2.770e-23366.06Glutamate decarboxylase n=1 Tax=Tribonema minus Ta... [more]
M4C0A7_HYAAE2.530e-19666.98Glutamate decarboxylase n=1 Tax=Hyaloperonospora a... [more]
K3WHQ2_GLOUD6.160e-19259.08Glutamate decarboxylase n=1 Tax=Globisporangium ul... [more]
A0A8K1C3X5_PYTOL2.320e-19167.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484E0T4_BRELC5.190e-19157.97Glutamate decarboxylase n=1 Tax=Bremia lactucae Ta... [more]
G4YNZ2_PHYSP4.220e-19058.39Glutamate decarboxylase n=13 Tax=Peronosporaceae T... [more]
A0A5D6Y3D2_9STRA1.430e-18958.25Glutamate decarboxylase n=1 Tax=Pythium brassicum ... [more]
A0A1Y2CEZ6_9FUNG2.030e-18959.71Glutamate decarboxylase n=1 Tax=Rhizoclosmatium gl... [more]
H3G979_PHYRM3.410e-18867.25Glutamate decarboxylase n=6 Tax=Peronosporaceae Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 17..310
e-value: 3.9E-85
score: 287.2
NoneNo IPR availableGENE3D3.90.1150.160coord: 314..411
e-value: 1.9E-28
score: 100.2
NoneNo IPR availablePIRSRPIRSR602129-50PIRSR602129-50coord: 3..406
e-value: 1.9E-110
score: 366.2
IPR010107Glutamate decarboxylaseTIGRFAMTIGR01788TIGR01788coord: 2..394
e-value: 3.3E-169
score: 561.1
IPR010107Glutamate decarboxylasePANTHERPTHR43321GLUTAMATE DECARBOXYLASEcoord: 2..419
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 3..331
e-value: 7.1E-69
score: 232.3
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 2..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:654770..663840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348380mRNA_4937Tribonema minus UTEX_B_3156 mRNAContig_23 654253..665169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348380|estExt_Genemark1.C_Ctg_230075 ID=Trimin1|348380|estExt_Genemark1.C_Ctg_230075|Name=jgi.p|Trimin1|348380|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=480bp
MVLDGRPRLNLASFVTTRMEPEAEALMQDAATKNAIDMDEYPQTTIMHQR
CVNMIGRLFHAPLEPEQEATGTGAIGSSEAIMLAVLAMKWAWKAHRAKKG
LPATNPNIVFGSNVQVCWHKACVYFEIEGREGKVSADKLVLTPERAEPLI
DENTIGVCCLLGSTFNGEYEDIKGIHDMVVAKNEANDWMVRIHVDAASGG
FVAPFLEPDLLWDFRLPNVKSINVSGHKFGLVYAGIGWLLFREKADLHPD
LVFHVNYLGGDQASFTLNFSKGAGTIVGQYYQLLRLGKVGYTQIMTNAMS
NAQFLRQKLVATGKVDIRDKGNIPLVAWSLKDSSKYTVFDIQDKLRDKNW
IVPAYTCPPGAEELAILRVVVKQDFSRDLAETLVDDIVTAMDWLEHHPSQ
HAAVQGEINEKREAKHAKHTTKLKDVANRIKWAMHVVPSTSLPEDSEHGA
APLLSKHHLFSMKTDPKHRSTGEKTFGVC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015421PyrdxlP-dep_Trfase_major
IPR010107Glutamate_decarboxylase
IPR002129PyrdxlP-dep_de-COase
IPR015424PyrdxlP-dep_Trfase