Trimin1|142242|gw1.229.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|142242
Unique NameTrimin1|142242|gw1.229.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length152
Homology
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BLAST of jgi.p|Trimin1|142242 vs. uniprot
Match: A0A836CIN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN7_9STRA)

HSP 1 Score: 295 bits (754), Expect = 6.760e-101
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 
Query:    1 DDADTQQQGWLEVAALASSYLDSSRLGAAGACGLVVQMLHRHAQDVKVQENGWKAAVALAYKDAGNRRRLCAAGVLEQLVQAVKGHMPHAGVQLIAWWAAGRLAVDQASRLKLGSAGACALLVQAFRAHRSSDVREVLQFAASKLTDDCQEN 152
            DDADTQQQGWLEVAALASSYLDSSRLGAAGACGLVVQMLHRHAQDVKVQENGWKAAVALAYKDAGNRRRLCAAGVLEQLVQAVKGHMPHAGVQLIAWWAAGRLAVDQASRLKLGSAGACALLVQAFRAHRSSDVREVLQFAASKLTDDCQEN
Sbjct:    1 DDADTQQQGWLEVAALASSYLDSSRLGAAGACGLVVQMLHRHAQDVKVQENGWKAAVALAYKDAGNRRRLCAAGVLEQLVQAVKGHMPHAGVQLIAWWAAGRLAVDQASRLKLGSAGACALLVQAFRAHRSSDVREVLQFAASKLTDDCQEN 152
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142242 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CIN7_9STRA6.760e-101100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..152
e-value: 6.1E-14
score: 53.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 30..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_229contigContig_229:85811..86266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142242mRNA_18433Tribonema minus UTEX_B_3156 mRNAContig_229 85811..86266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|142242|gw1.229.1.1 ID=Trimin1|142242|gw1.229.1.1|Name=jgi.p|Trimin1|142242|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=152bp
DDADTQQQGWLEVAALASSYLDSSRLGAAGACGLVVQMLHRHAQDVKVQE
NGWKAAVALAYKDAGNRRRLCAAGVLEQLVQAVKGHMPHAGVQLIAWWAA
GRLAVDQASRLKLGSAGACALLVQAFRAHRSSDVREVLQFAASKLTDDCQ
EN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold