Trimin1|180785|e_gw1.228.36.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|180785
Unique NameTrimin1|180785|e_gw1.228.36.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length416
Homology
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BLAST of jgi.p|Trimin1|180785 vs. uniprot
Match: A0A836CFX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX3_9STRA)

HSP 1 Score: 552 bits (1422), Expect = 5.080e-194
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0 
Query:    1 MPETPPASIRRIFTRFKVIAARVHITGPDDYYGDKDDCDNAGDHFGRAFAALQTTDRWDNVEDLTLFIHCAKNVPTRLPARLRRLTVVDIALDTRRRELCGVADNEERGAHGITPSADGGIDEGAGYINVFQDYDFINWILPQLPRSLEDLCLSRSGIRSLTGPLPQNLRTLALGPKFTGPLEDLXXXXXXXXXXXXXXXXXXXXXAGLTHFTAFETREYCWFEQPLGALPAAMRVLDIAASTYXXXXXXXXXXXXXXLRVGQRFXXXXXXXXXXXXXXVFAHRALXXXXXXXXXXXXXEXEFHQYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMSGDSYYLNNVVHGLPPSVVKFIGNRGMKCPPSFDRSGDAITEPARR 415
            MPETPPASIRRIFTRFKVIAARVHITGPDDYYGDKDDCDNAGDHFGRAFAALQTTDRWDNVEDLTLFIHCAKNVPTRLPARLRRLTVVDIALDTRRRELCGVADNEERGAHGITPSADGGIDEGAGYINVFQDYDFINWILPQLPRSLEDLCLSRSGIRSLTGPLPQNLRTLALGPKFTGPLEDLXXXXXXXXXXXXXXXXXXXXXAGLTHFTAFETREYCWFEQPLGALPAAMRVLDIAASTYXXXXXXXXXXXXXXLRVGQRFXXXXXXXXXXXXXXVFAHRALXXXXXXXXXXXXXEXEFHQYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMSGDSYYLNNVVHGLPPSVVKFIGNRGMKCPPSFDRSGDAITEPARR
Sbjct:    1 MPETPPASIRRIFTRFKVIAARVHITGPDDYYGDKDDCDNAGDHFGRAFAALQTTDRWDNVEDLTLFIHCAKNVPTRLPARLRRLTVVDIALDTRRRELCGVADNEERGAHGITPSADGGIDEGAGYINVFQDYDFINWILPQLPRSLEDLCLSRSGIRSLTGPLPQNLRTLALGPKFTGPLEDLXXXXXXXXXXXXXXXXXXXXXAGLTHFTAFETREYCWFEQPLGALPAAMRVLDIAASTYXXXXXXXXXXXXXXLRVGQRFXXXXXXXXXXXXXXVFAHRALXXXXXXXXXXXXXEXEFHQYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMSGDSYYLNNVVHGLPPSVVKFIGNRGMKCPPSFDRSGDAITEPARR 415
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BLAST of jgi.p|Trimin1|180785 vs. uniprot
Match: A0A835Z0U9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.760e-7
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:  209 LTHFTAFETREYCWFEQPLGALPAAMRVLDIAASTYXXXXXXXXXXXXXXLRVGQRF 265
            LTH T F+T +YC FEQPLGALPA +RVLDIA+S YXXXXXXXXXXXX  LRVGQ F
Sbjct:  270 LTHLTFFKTEDYCHFEQPLGALPAGLRVLDIASSMYXXXXXXXXXXXXKVLRVGQCF 326
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180785 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CFX3_9STRA5.080e-194100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0U9_9STRA2.760e-777.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 139..393
e-value: 4.7E-10
score: 40.5
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 294..391
coord: 140..347
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 130..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_228contigContig_228:67784..69031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180785mRNA_11501Tribonema minus UTEX_B_3156 mRNAContig_228 67784..69031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|180785|e_gw1.228.36.1 ID=Trimin1|180785|e_gw1.228.36.1|Name=jgi.p|Trimin1|180785|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=416bp
MPETPPASIRRIFTRFKVIAARVHITGPDDYYGDKDDCDNAGDHFGRAFA
ALQTTDRWDNVEDLTLFIHCAKNVPTRLPARLRRLTVVDIALDTRRRELC
GVADNEERGAHGITPSADGGIDEGAGYINVFQDYDFINWILPQLPRSLED
LCLSRSGIRSLTGPLPQNLRTLALGPKFTGPLEDLPATLRKMCIGGHFNT
AIHVLPAGLTHFTAFETREYCWFEQPLGALPAAMRVLDIAASTYFNSPLG
ELPPTLQVLRVGQRFDQPLGALPNGLEVLVFAHRALFNQPLGPLPHSLQE
LEFHQYARFDQPLGRLPHSLRVLEFHIHAVFNQPLDVLPESLRVLKFMGY
TRFSQQLPRLPDCLRELTMSGDSYYLNNVVHGLPPSVVKFIGNRGMKCPP
SFDRSGDAITEPARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf