Trimin1|354177|estExt_Genemark1.C_Ctg_2140017 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835Z8Q1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q1_9STRA) HSP 1 Score: 540 bits (1392), Expect = 2.690e-193 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
Query: 1 MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP 298
MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP
Sbjct: 1 MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP 298
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YWR1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR1_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.750e-36 Identity = 78/148 (52.70%), Postives = 93/148 (62.84%), Query Frame = 0
Query: 50 TDAA-VSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARG-GSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWE 195
+DA+ + +YL V TL G C W R H ++ A L V P ++WGVAPAC G G+ GG G G E GV S KCPLC GAGCA +CSVCLS+FEA +EVRQLPCKHLYHK CIDKW +S K+TCPLC W+
Sbjct: 26 SDASYLPLMYLPIFAVVTLAGACAWC---RWH----SKNAPLHVRP-PSYQWGVAPACEAGEGAGAGGEG----GGERGVVVSEKCPLCVGAGCASLPSDCSVCLSAFEAPQEVRQLPCKHLYHKECIDKWLDSGKETCPLCAACAWQ 161
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A836CMX2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.020e-19 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0
Query: 138 GAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVW 194
GAGC + EC VCLS+FE G+EVR+LPCKHLYH ACID W E+ KDTCPLC+ PVW
Sbjct: 170 GAGCHLVSRECVVCLSNFETGQEVRRLPCKHLYHAACIDHWLETGKDTCPLCVGPVW 226
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A151U8U4_CAJCA (E3 ubiquitin-protein ligase At1g63170 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U8U4_CAJCA) HSP 1 Score: 75.5 bits (184), Expect = 2.520e-13 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
Query: 147 ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 189
EC VCLS+FEA +EV QLPCKH +H+ C+DKWF ++ TCPLC
Sbjct: 83 ECCVCLSAFEANQEVSQLPCKHFFHRGCLDKWFRNKHATCPLC 125
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: I1SV93_AVIMR (RING-H2 type zinc finger n=1 Tax=Avicennia marina TaxID=82927 RepID=I1SV93_AVIMR) HSP 1 Score: 75.5 bits (184), Expect = 4.190e-13 Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 86 RAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 189
R ++ R L R G +P RGGST G G G P A EC VCLS FEA EEV +L CKH +HK C+DKWF++Q TCPLC
Sbjct: 66 RVSVTRYGSLCRDRCGCSPR-ERGGSTAAGDG--------GYWPPAV--------------ECCVCLSRFEADEEVSELSCKHFFHKGCLDKWFDNQNITCPLC 146
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A2S0X0S1_MEDSF (Salt tunicamycin-induced RING finger protein (Fragment) n=2 Tax=Medicago TaxID=3877 RepID=A0A2S0X0S1_MEDSF) HSP 1 Score: 75.1 bits (183), Expect = 5.940e-13 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 131 AKCPLCEGAGCAKAAP--ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 189
A+ C C +P EC VCLS FEA +EV +LPCKH +H+ C+DKWF+++ +CPLC
Sbjct: 86 ARSSSCSNGSCGWTSPMVECCVCLSGFEANQEVSELPCKHFFHRGCLDKWFDNKHSSCPLC 146
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: H9VMZ2_PINTA (RING-type domain-containing protein (Fragment) n=4 Tax=Pinus subgen. Pinus TaxID=139271 RepID=H9VMZ2_PINTA) HSP 1 Score: 72.4 bits (176), Expect = 6.760e-13 Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 147 ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 189
EC+VCL FE G E+RQLPC HL+H+ C+DKW + Q+ TCPLC
Sbjct: 14 ECAVCLCKFEEGVEIRQLPCCHLFHRPCLDKWLDHQQITCPLC 56
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A4D8YQP3_SALSN (E3 ubiquitin-protein ligase RHA2 n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8YQP3_SALSN) HSP 1 Score: 75.1 bits (183), Expect = 7.300e-13 Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query: 145 APECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 193
A ECSVCLS FE G+EVR+L CKH +HK C+D W + TCPLC PV
Sbjct: 71 AAECSVCLSPFEEGDEVRKLKCKHTFHKGCVDTWLQQDAATCPLCRRPV 119
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A6V7PXU4_ANACO (RING-type domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7PXU4_ANACO) HSP 1 Score: 73.9 bits (180), Expect = 7.830e-13 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 142 AKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 193
A+A EC VCLS F E R+LPC+HL+H+AC+D+W S + TCPLC VP+
Sbjct: 41 AEAGEECCVCLSRFGEDEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 92
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A6V7PYJ8_ANACO (RING-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PYJ8_ANACO) HSP 1 Score: 73.9 bits (180), Expect = 1.130e-12 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 142 AKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 193
A+A EC VCLS F E R+LPC+HL+H+AC+D+W S + TCPLC VP+
Sbjct: 42 AEAGEECCVCLSRFGEDEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 93 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|354177|estExt_Genemark1.C_Ctg_2140017 ID=Trimin1|354177|estExt_Genemark1.C_Ctg_2140017|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=299bpback to top |