Trimin1|348140|estExt_Genemark1.C_Ctg_200060 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348140
Unique NameTrimin1|348140|estExt_Genemark1.C_Ctg_200060
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length943
Homology
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A835Z450_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z450_9STRA)

HSP 1 Score: 1369 bits (3543), Expect = 0.000e+0
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0
Query:    1 MEKLNPYKQRQRQPQXXXXXXXXXXXXXXXXXXXXXXHEVGAAGAAPDATTGDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVSQFRGQVNEPPDPRQPLLNSFLRKPADGSGGSSSAPHAGGAXXXXXXXXXXXXXXSMSTVAQQQQCSGDAGRAEAGAPAAAAADLDESAEGSGDDDFVQFDDSDLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCPICGRAVAGLNFELNMHVDLCLNSAAVRGAVREASASDIGASRKRRRIEDFF 942
            MEKLNPYKQRQRQPQXXXXXXXXXXXXXXXXXXXXXXHEVGAAGAAPDATTGDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVSQFRGQVNEPPDPRQPLLNSFLRKPADGSGGSSSAPHAGGAXXXXXXXXXXXXXXSMSTVAQQQQCSGDAGRAEAGAPAAAAADLDESAEGSGDDDFVQFDDSDLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCPICGRAVAGLNFELNMHVDLCLNSAAVRGAVREASASDIGASRKRRRIEDFF
Sbjct:    1 MEKLNPYKQRQRQPQXXXXXXXXXXXXXXXXXXXXXXHEVGAAGAAPDATTGDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVSQFRGQVNEPPDPRQPLLNSFLRKPADGSGGSSSAPHAGGAXXXXXXXXXXXXXXSMSTVAQQQQCSGDAGRAEAGAPAAAAADLDESAEGSGDDDFVQFDDSDLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCPICGRAVAGLNFELNMHVDLCLNSAAVRGAVREASASDIGASRKRRRIEDFF 942          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A7S2WBD8_9STRA (DNA polymerase kappa n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBD8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 3.460e-70
Identity = 234/696 (33.62%), Postives = 299/696 (42.96%), Query Frame = 0
Query:   52 GDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAA---------------AYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLV-GVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAAD---ALPDG----------AVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTS--NVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVSQFRGQVNEPPDPRQPLLNSFLRKPADGS 716
            G + +HLFVFTNDKAGM  VDK  VN+V+YEMSK S +F HA  QD K D+++ D++ K+++   +  RR     E +ALE+  E+ R   RVCVV DMD +YAAVEMRD+P             L DKPMAVGG GMI TANY AR                                                             +GVRSAMPGFI  +LCPEL+                            FV  +F KYK  +                 SLDEAYLD+T  V  R                                           +   +SS    +G G+        S   AEL  +   A    LT SAG+A NF LAK+ +D +KP+GQ  +         FL  +PVRK+GGIGKVMEKTL  V GV T  EL +    ++H  TP++S WLLRVA  +   D   A A+   A+ DG          +V RKGIS ERTF  LS   DL AKL  +C  LAE M+ + L GR VTLK                                                      LKT +F+V +RA T+    +VST + I  +   LL  + PL LRLMG+RVS F+ Q     D  Q  + SF+++ A G+
Sbjct:  126 GSNTAHLFVFTNDKAGMGKVDKSKVNKVVYEMSKDSAYFAHASSQDKKNDKRIHDLREKLQSL--SLSRRSSLASEVSALEIKLEKQRFCRRVCVVVDMDCYYAAVEMRDNP------------HLRDKPMAVGGIGMISTANYKARE------------------------------------------------------------YGVRSAMPGFIALKLCPELI----------------------------FVRSHFDKYKETSDRVLTVLRQYDPHCRMMSLDEAYLDLTEEVSRR-------------------------------------------QVEETSSKANLEG-GAQMELEEMASRVVAELRAKVQEAS-GGLTCSAGLAPNFRLAKIASDVKKPNGQCIVPFHREAAIAFLHSMPVRKVGGIGKVMEKTLKEVFGVETVAELFEKRLELFHCLTPKSSHWLLRVALAIHHDDEAKAMAEWKTAVGDGEDAAEATSVQSVRRKGISCERTFAPLSNRADLQAKLSSLCRTLAEHMSAKALSGRTVTLK------------------------------------------------------LKTTKFEVRSRAATAPAGTYVSTGEDIERLVMPLLEKEFPLSLRLMGIRVSHFKNQFKAL-DAGQRTIGSFMQRGAAGA 619          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A2D4CEH4_PYTIN (DNA polymerase kappa n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEH4_PYTIN)

HSP 1 Score: 253 bits (647), Expect = 1.960e-69
Identity = 212/662 (32.02%), Postives = 290/662 (43.81%), Query Frame = 0
Query:   51 TGDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAA---------------AYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPA---------GPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVS 688
            T D+ + LFVFT  KAGM+GVDK HV +V++EMSK S FF+++ +Q++KV+ ++ +M  K+     A R  L R+I+Q    L A+R  +  R  VV DMD FYAAVEMRD+P+L              KP+AVGG  M+ T NY AR+                                                            +GVR+AMPGFIGK+LCP+LV                             VPP F +Y A +               A SLDE Y D+T+ +     R                                        + G  S D    G  + +PA            V+    ++FEE      T+LTASAGIA N MLAK+C+D  KP+GQF L      +  F++ L VRKIGGIGKVMEK L  +GV T  +L +    V+HVFTPRT++WLL+VA G+ + +  ++      + A  RK  S+ERTFR L  P  L+   RE+C  L +D+A     G+ VTLK                                                      LK V+F V TRA +++  + + D ++ +  +LLR  LPL+LRLMGVRVS
Sbjct:    3 TADEAAQLFVFTAQKAGMQGVDKAHVQKVVFEMSKDSAFFQNSMRQNAKVEARIAEMTAKLEGLTPARRETLRRQIDQMIATLEAQR--ELGRTKVVVDMDMFYAAVEMRDNPSL------------RGKPVAVGGMSMLSTTNYEARK------------------------------------------------------------YGVRAAMPGFIGKELCPDLV----------------------------LVPPRFEQYTAISQQIRAIVEQYDPDFRALSLDEVYCDITDYMDAHWARYAAHSTAACDLEEEQ------------------------DDVGVKSDDEXXXGAVAVAPALLRQREAVAAAIVAELRQKIFEE------TQLTASAGIAANSMLAKICSDMNKPNGQFVLPFSRDRIVAFMQSLSVRKIGGIGKVMEKVLGALGVETAQDLFERRVEVFHVFTPRTAKWLLQVALGIHASERSSSG----DEDASQRKSYSRERTFRGLRDPXWLEKICRELCDMLEQDLAHGGHGGKTVTLK------------------------------------------------------LKCVDFRVKTRAVSTSRTLRSSDDLFDVACELLRKXLPLKLRLMGVRVS 474          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A6H5KQM2_9PHAE (DNA polymerase kappa n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQM2_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 3.790e-68
Identity = 240/726 (33.06%), Postives = 301/726 (41.46%), Query Frame = 0
Query:   58 LFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQK----------LEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAA---------------AYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTG-------------------QEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAA---EVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTL-SLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLP-----------LRLRLMGVRVSQFRGQVNEPPDPRQPLLNSFLR-KPADGS--GGSSS 721
            +FVF+N+KAGM  VDK  VN +IYEMSK S +FK A+ QD K+DQK          + +MK K++      + +L R+ ++ A EL A+R  Q D VC+V DMD FYAAVE+RD P L            ADKP+AVGGE MI T NY AR +                                                            GVRSAMPGFIG++LCPELV                            FV P++ KY   A               AYSLDEAYL++T  + ER+                                       T                    +E    + DGRS    +         ++AA +  E   A   E T+LTAS GI  NFMLAK+ +D  KPDGQ C+G    EV  FL DLPVRKIGG+GKV EK L   +GV TCG+L     AV HV TP TS WL++                  PD         KERTF ELSAP DL  K REIC  LA +MA + L+ +      XXXXXXXX                                                      T+  T + +VS+ D +++  S LL+ ++            LRLRL+GVR S FRGQ   P  P Q  L+ FL  K A+G   GG  S
Sbjct:    1 MFVFSNNKAGMGSVDKEKVNHIIYEMSKNSSYFKQAKLQDDKLDQKACIMRVLNVAVAEMKVKLKALGGVRKAQLTRQADKIATELEAQR--QLDDVCLVIDMDMFYAAVEVRDRPEL------------ADKPVAVGGESMISTTNYHARLK------------------------------------------------------------GVRSAMPGFIGRKLCPELV----------------------------FVKPDYEKYTVVAEQIREIFREYDPRMRAYSLDEAYLNVTKVLCERLGLDGSNAPAGTKEAGVAASAAAAGAPEHVCSVTYEAEADTSRRRRMGSNVMYTEKRYEGDEEDEEEARDGRSWEKRNPRETRRIRLFEAARVLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERGAVIHVMTPHTSRWLIKAC---------------YPD-------AGKERTFGELSAPRDLLDKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXX------------------------------------------------------TQDSTGHAYVSSADDLFSAASALLQREIQGAAAASAPGGKLRLRLIGVRASGFRGQAGAPVLPGQATLDGFLSSKAAEGGCQGGDES 548          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A8K1FPT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPT7_PYTOL)

HSP 1 Score: 244 bits (624), Expect = 5.420e-66
Identity = 208/644 (32.30%), Postives = 278/644 (43.17%), Query Frame = 0
Query:   56 SHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAE-------VTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGV----GSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVS 688
            + +FVFT  KAGM+ VDK HV +V+YEMSK S FF+++ KQ+ KV+ ++ +MK K+R    A    L R+I+   L    E  R   R  VV DMD FYAAVEMRD+P+L              KP+AVGG GM+ T NY AR+                                                            FGVR+AMPGFIGK+LCPEL+         ++I    S++   +V       PNFT      A SLDE YLD+T+ ++    +                                      G   GRS SD  +   G              E    A   E       VT+LTASAGIA N MLAK+C+D  KP+GQ+ L      V  F++ LPVRKIGGIGKVMEK L  +G+ T  ++ D    ++H  TPR++ WLL+++ GV    G P                RK  S+ERTFR +  P  L+   RE+C  L +D+AE     + +TLK                                                      LK V+F V TRA +S   + T D ++A   +LLR ++PL LRL+GVR S
Sbjct:   33 AQMFVFTAQKAGMKDVDKEHVQKVVYEMSKDSLFFQNSIKQNQKVEARINEMKLKLRGLTKAKHETLRRQID--PLVAQWETQRDLTRTMVVVDMDMFYAAVEMRDNPSL------------RGKPVAVGGIGMLSTTNYEARK------------------------------------------------------------FGVRAAMPGFIGKELCPELIIVPTNFKKYTTI----SQQVRAIVADY---DPNFT------AMSLDEVYLDITDYMEANWAKY------------------------------------AGAGGGRSESDDEADQDGEEIEDQSHAMNSQRETVAAAIVDEIRRRIHGVTQLTASAGIAANTMLAKICSDINKPNGQYVLPFTRDRVVSFVQGLPVRKIGGIGKVMEKVLGALGITTAKDIYDHRVELFHALTPRSAAWLLQISMGVKQSSGEPSE--------------RKSYSRERTFRGIGDPRWLEKICREVCDMLGKDLAEGGHGAKTLTLK------------------------------------------------------LKCVDFSVRTRAVSSTCIMKTSDDLFAYAIELLRKEMPLELRLLGVRAS 485          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A833RXG3_PHYIN (DNA polymerase kappa n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RXG3_PHYIN)

HSP 1 Score: 235 bits (599), Expect = 3.120e-64
Identity = 202/664 (30.42%), Postives = 281/664 (42.32%), Query Frame = 0
Query:   56 SHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAAA---------------YSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLS-LVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVSQFRGQVNEPPDPRQP 703
            S +FVFT DKAGM+GVDK HV +V+++MSK S FF+ + + ++KV+Q++  M+ K+     +  +RL++  +    +L A   R   R  VV DMD FYAAVEMRDDP L             D P+AVGG GMI T NYAAR+                                                            FGVR+AMPGFIGK+LCP+L                             FVP N  KY   AA               +SLDEA LD+T+ + E  ++                E                              +  S  +G  + A   V     ++F+       T+LTASAGIA N MLAK+C+D  KP+GQ+ L      V  F+R+LPVRKIGGIGKVMEKTL+  + V+T G+L D    + H+F+ +T+ WLL+ + GV                   RK  S+ERTF+ LS P+ L+ K  EIC  LA+D+ + +   + VT                                                         K  +F   +R+ +    V T+D +++   +LLR +LPL LRLMGVR +    +   P +P QP
Sbjct:   28 SAMFVFTADKAGMKGVDKQHVQEVVHKMSKDSSFFQKSLRDNAKVEQRVAAMREKLACLTGSQLQRLQQEADARVAQLEA--TRDLSRTIVVVDMDMFYAAVEMRDDPKL------------RDVPLAVGGLGMISTTNYAARQ------------------------------------------------------------FGVRAAMPGFIGKELCPDLH----------------------------FVPVNMKKYAGVAAEIRAVFAEYDPDFEAFSLDEACLDLTDYIAENWQKYISDAMDEIESKESDKE------------------------------EWASTASGRAAIAAVVVRELRKKVFD------CTQLTASAGIAVNSMLAKICSDMNKPNGQYVLPFSRERVMTFIRELPVRKIGGIGKVMEKTLNEALDVQTGGDLFDQRGKIAHLFSGKTAMWLLQTSLGVQERREK-----------QERKSFSRERTFKRLSDPKQLEEKCLEICEMLAKDLEKANKAAKNVTFV------------------------------------------------------FKDTDFARCSRSMSLASAVYTVDDLFSNAVELLRRELPLTLRLMGVRAASLVSRCTSPDNPSQP 488          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: F0VZA0_9STRA (DNA polymerase kappa n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZA0_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.210e-61
Identity = 185/531 (34.84%), Postives = 249/531 (46.89%), Query Frame = 0
Query:   56 SHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFV-PPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLK 585
            + LFVFT +KAGM  V+  H+ + +YEMSK S FFK++ K + KVDQ+++ M+ ++        R LE RI++    L  E  R   R+ VV DMD FYAAVEMRD+P L               P+AVG  GMI T NY AR+                                                            FGVRSAMPGFIGK+LCP+LV   +R+   S+I        A+ +  I  V  PNFT      A+SLDEA LD+T+  +E  R+                  V                  T QE G    +  +    S       VS     +FEE      T+LTASAGIA N MLAK+C++  KP+GQF L      + +F+R+LPVRK+GGIGKVMEK L+ + + T  E+ D  A ++HVF  RT+ WLLR   G+     ++            RK  S+E TF+ +S  E L      IC  LA+D+AE ++  R +TLK
Sbjct:   56 NELFVFTAEKAGMADVNAEHLRKTVYEMSKDSVFFKNSMKNNDKVDQRIKQMQEQVAKLTQPKIRFLEARIDEIVA-LQLECRRDLTRIKVVIDMDMFYAAVEMRDNPIL------------RHVPLAVGSIGMISTTNYEARK------------------------------------------------------------FGVRSAMPGFIGKKLCPDLVFTPVRMEKYSAI--------AQEIRQIFAVYDPNFT------AFSLDEAALDLTDYTREHWRKY-----------------VSQLSLKDWNHDGWMQDCETRQEGGHEMPESLTMKIASA-----IVSEIRQRIFEE------TQLTASAGIAVNTMLAKICSNIEKPNGQFALEGSKEVILEFIRELPVRKVGGIGKVMEKILAALNITTMQEVFDRRAVLFHVFKERTATWLLRTCLGIQEQQSES-----------ERKSYSRETTFKAVSDFESLKQICASICEHLAQDLAEDNVAARNITLK 460          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A662X8T7_9STRA (DNA polymerase kappa n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8T7_9STRA)

HSP 1 Score: 232 bits (592), Expect = 3.680e-61
Identity = 206/656 (31.40%), Postives = 283/656 (43.14%), Query Frame = 0
Query:   38 HEVGAAGAAPDATT---GDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAA-AAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLS-LVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVS 688
            H   ++    DA T   G + + +FVFT  KAGM+ VDK HV QV++EMSK S +++ +  ++ KVD+++  M++K+         RL+  ++    +L A   R   R  V+ DMD FYAAVEMRD+P L             D P+AVGG  MI T NY AR+                                                             GVR+AMPGFIGK+LCPEL             V     + AR+   I  V   F +Y  +  A+SLDEA LD+T+ +    R+                                      G+EA                 A   V     ++FE       T+LTASAGIA N M+AK+C+D  KP+GQ+ L      V  F+R+LPVRKIGGIG+VMEKTL   + V T GEL      ++H+F+ +T+ WLLR + G+                   RK  S ERTFR +S P+ L+AK  E+CTKLAED+   +  G+ VTLK                                                      LK+ +F V +R+ +    VST D++YA   +LLR +LPL LRLMGVR +
Sbjct:   14 HVASSSKTDEDAATVEEGAETAEMFVFTVAKAGMKDVDKEHVKQVVHEMSKDSAYYQKSLLRNEKVDERVAAMRQKLTCLTAGQHLRLQGEVDARVAQLEA--TRDLTRTVVMVDMDMFYAAVEMRDNPKL------------RDVPLAVGGTNMISTTNYLARKH------------------------------------------------------------GVRAAMPGFIGKELCPEL-----------QFVPVDMPKYARVAEQIRAV---FAEYDPSFEAFSLDEACLDLTDFMATHWRQYLTVAAAGLRSEEAEQSEEDEQQIKGDGGELQWVSTAVGREA----------------IASAIVRELRQKIFER------TQLTASAGIAVNAMIAKICSDMNKPNGQYALPFTRERVVGFIRELPVRKIGGIGQVMEKTLGGALDVHTGGELFAQRGKLFHLFSEKTASWLLRTSLGLQERRER-----------QERKSFSCERTFRSMSDPQQLEAKCLEMCTKLAEDLQAANRAGKNVTLK------------------------------------------------------LKSTDFAVRSRSVSLVAAVSTADELYAHAVELLRRELPLTLRLMGVRAA 494          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: G4YKE9_PHYSP (DNA polymerase kappa n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKE9_PHYSP)

HSP 1 Score: 227 bits (578), Expect = 2.430e-60
Identity = 193/632 (30.54%), Postives = 272/632 (43.04%), Query Frame = 0
Query:   58 LFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLS-LVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVS 688
            +FVFT DKAGM+GVDK HV +V+++MSK S F++ + + + KV+Q++  M++K+       + RL++  ++    + A   R   +  VV DMD FYAAVEMRDDP L             D P+AVGG  MI T NYAAR+                                                            FGVR+AMPGFIGK+LCPEL    + +   + +       AA++        PNF       A+SLDEA LD+T+ V +  ++                E                                        +PAG A    A          + T+LTASAGIA N MLAK+C+D  KP+GQ+ L      V  FL DLPVRKIGGIGKV EK L+  +GV T GEL +    ++H+FT +T+ WLL+ + GV                   RK  S+ERTFR LS P++L+AK  E+C  LA+D+ + +   + VT  +                                                      K  +F   +R+ T    + T + +Y+   +LLR +LPL LRL+GVR +
Sbjct:    1 MFVFTADKAGMKGVDKQHVQEVVHKMSKDSSFYQKSLRDNEKVEQRVAAMRKKLAGLTGGQQLRLQQEADERVARMEA--TRDLSKTIVVVDMDMFYAAVEMRDDPKL------------CDVPLAVGGMNMISTTNYAARQ------------------------------------------------------------FGVRAAMPGFIGKELCPELHFVPVNMEKYAGV-------AAQVRAVFAQYDPNFE------AFSLDEACLDLTDYVAKNWQKYASVALDDFESKEEVQEEEEQWPS---------------------------------TPAGRAAIAAAVVRELRQKIFDCTQLTASAGIAVNAMLAKICSDMNKPNGQYVLPFTRERVLTFLCDLPVRKIGGIGKVTEKILNEALGVHTGGELFNQRGKIFHLFTEKTAVWLLQTSLGVRERREK-----------QERKSFSRERTFRSLSDPKELEAKCLEVCKMLAKDLEKANKAAKNVTFVY------------------------------------------------------KDTDFARCSRSVTLASAIFTAEDLYSSAVELLRRELPLTLRLLGVRAA 447          
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Match: A0A061R8V8_9CHLO (DNA polymerase kappa n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R8V8_9CHLO)

HSP 1 Score: 228 bits (580), Expect = 2.750e-60
Identity = 222/691 (32.13%), Postives = 283/691 (40.96%), Query Frame = 0
Query:   55 KSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKVDQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDMDQFYAAVEMRDDPALGLAXXXXXXXXLADKPMAVGGEGMICTANYAARRRLEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYVRALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAARLVTSIVFVPPNFTKYKAAA---------------AYSLDEAYLDMTNCVKERIRRXXXXXXXXXXXXXXXXEPVXXXXXXXXXXXXXXXXXXTGQEAGRSSSDGRSKGTGSGSPAGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQFCLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLS-LVGVRTCGELLDSMAAVWHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRELSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHXXXXXXXXXXXXLMMAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTRAHTSNVWVSTLDQIYAITSKLLRAQLP-----LRLRLMGVRVSQFRGQVNEP--PDPRQPLLNSFLRKPADGSGGSSSA 722
            K +  VFTN KAGM  VDK  V +V+YEMSK S FF++ +++     +K++++  +          R E+  +    EL A+R  + D+V +  DMD FYAAVE RD+P+L             D PMAVGG GMI TANY ARR                                                            FGVRSAMPGFI ++LCPELV                            FV P+F KY++AA               A SLDEAYLD T   + R                                        TG E                          A EL  +  AA  T LT S GIA N  LAKVC+D  KP+GQF +    G + DFLR LP+RKIGGIGKV E+ LS  + V  CG LLD  A +  + + R + + L V  G+G+ +H     +   DG V RKGIS ERTFR +    +++ KL E+   LAE+MAE  L+GR +TLK                                                      LK  +F V TRA TS  W+ + D I      LLRA+L      LRLRLMG+R+S        P  P+  Q  L  F+ K AD  GGS  A
Sbjct:   35 KKYETVFTNTKAGMDNVDKEKVKKVVYEMSKDSAFFQNEQRKMENSRRKIDELICQAEALTAEQLDRFEKSADDRIAELEAKR--RLDKVWLHVDMDAFYAAVEERDNPSL------------KDVPMAVGGTGMITTANYKARR------------------------------------------------------------FGVRSAMPGFIARRLCPELV----------------------------FVRPDFAKYRSAADETRAIFRELDPDFEAMSLDEAYLDATPAARAR--------------------------------------GLTGAEL-------------------------AEELRHKVLAA--TGLTCSVGIAPNKRLAKVCSDMNKPNGQFEVKPERGAILDFLRALPIRKIGGIGKVAEQMLSEALSVTECGHLLDRRAVIVALCSERAAGFYLEVGLGLGAAEHS----ERPGDGEVGRKGISCERTFRAICTVPEMEQKLAELSAHLAEEMAEEGLRGRSLTLK------------------------------------------------------LKGTDFKVRTRAVTSPGWLCSTDGILEAARGLLRAELRQCPQGLRLRLMGLRMSHLAKLGGAPGTPERGQTTLREFVAK-ADAPGGSERA 499          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348140 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z450_9STRA0.000e+0100.00UmuC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2WBD8_9STRA3.460e-7033.62DNA polymerase kappa n=1 Tax=Rhizochromulina marin... [more]
A0A2D4CEH4_PYTIN1.960e-6932.02DNA polymerase kappa n=2 Tax=Pythium insidiosum Ta... [more]
A0A6H5KQM2_9PHAE3.790e-6833.06DNA polymerase kappa n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A8K1FPT7_PYTOL5.420e-6632.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833RXG3_PHYIN3.120e-6430.42DNA polymerase kappa n=1 Tax=Phytophthora infestan... [more]
F0VZA0_9STRA2.210e-6134.84DNA polymerase kappa n=1 Tax=Albugo laibachii Nc14... [more]
A0A662X8T7_9STRA3.680e-6131.40DNA polymerase kappa n=2 Tax=Nothophytophthora sp.... [more]
G4YKE9_PHYSP2.430e-6030.54DNA polymerase kappa n=1 Tax=Phytophthora sojae (s... [more]
A0A061R8V8_9CHLO2.750e-6032.13DNA polymerase kappa n=2 Tax=Tetraselmis sp. GSL01... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableGENE3D3.40.1170.60coord: 250..282
e-value: 7.8E-7
score: 31.0
NoneNo IPR availableGENE3D1.10.150.810coord: 61..167
e-value: 4.7E-17
score: 64.6
NoneNo IPR availableGENE3D3.40.1170.60coord: 168..201
e-value: 9.6E-8
score: 33.6
NoneNo IPR availableGENE3D1.10.150.810coord: 454..522
e-value: 6.0E-17
score: 63.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 693..882
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 775..801
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 855..869
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 54..165
NoneNo IPR availablePANTHERPTHR11076:SF33DNA POLYMERASE KAPPAcoord: 168..199
coord: 636..925
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 168..199
coord: 636..925
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 254..585
NoneNo IPR availablePANTHERPTHR11076:SF33DNA POLYMERASE KAPPAcoord: 54..165
coord: 254..585
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 537..602
e-value: 6.5E-11
score: 44.4
coord: 617..696
e-value: 1.7E-9
score: 39.8
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 539..688
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 539..696
e-value: 1.1E-8
score: 35.6
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 419..452
e-value: 1.4E-6
score: 30.2
coord: 283..339
e-value: 7.8E-7
score: 31.0
IPR001126UmuC domainPFAMPF00817IMScoord: 148..200
e-value: 1.2E-5
score: 25.4
coord: 249..441
e-value: 4.3E-12
score: 46.2
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 145..475
score: 27.404232
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 126..165
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 168..199
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 250..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:506347..520593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348140mRNA_4098Tribonema minus UTEX_B_3156 mRNAContig_20 506297..520593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348140|estExt_Genemark1.C_Ctg_200060 ID=Trimin1|348140|estExt_Genemark1.C_Ctg_200060|Name=jgi.p|Trimin1|348140|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=943bp
MEKLNPYKQRQRQPQQEQQQQQPAKQQDTTPAAAAASHEVGAAGAAPDAT
TGDDKSHLFVFTNDKAGMRGVDKHHVNQVIYEMSKKSRFFKHAEKQDSKV
DQKLEDMKRKMRTFDDATRRRLERRIEQAALELSAERARQADRVCVVCDM
DQFYAAVEMRDDPALGLAVEMRDDPALADKPMAVGGEGMICTANYAARRR
LEASGPVVVHYWRAVGRYCCTALLKQGALSFGSRAFKGRRKRAYRLWIYV
RALNVSAATFGVRSAMPGFIGKQLCPELVSAALRIALVSSIVRCASRRAA
RLVTSIVFVPPNFTKYKAAAAYSLDEAYLDMTNCVKERIRRRRQRQQQQQ
PHGGGACEPVTPPLAVAAAAAAAAAAAATGQEAGRSSSDGRSKGTGSGSP
AGPAVSYDAAELFEEAAAAEVTRLTASAGIACNFMLAKVCADKRKPDGQF
CLGSGAGEVADFLRDLPVRKIGGIGKVMEKTLSLVGVRTCGELLDSMAAV
WHVFTPRTSEWLLRVAAGVGSPDHDAAAADALPDGAVTRKGISKERTFRE
LSAPEDLDAKLREICTKLAEDMAERHLQGRVVTLKHMVERHLEGRVLTLM
MAVICACATTGYYHSHYLALSAAAPPLFLRARTAVATAQLKTVEFDVLTR
AHTSNVWVSTLDQIYAITSKLLRAQLPLRLRLMGVRVSQFRGQVNEPPDP
RQPLLNSFLRKPADGSGGSSSAPHAGGASAGGSSASGGSADGSMSTVAQQ
QQCSGDAGRAEAGAPAAAAADLDESAEGSGDDDFVQFDDSDLSDDDDDGD
EFRGPSAAAASGIDDGRGGSGGGGGEASGSSDGGGGSEAAMRRISAVGGG
GCGSTSDGQHDSSSVDAARVNHDSAAAGGAMQQQQQQQQCPICGRAVAGL
NFELNMHVDLCLNSAAVRGAVREASASDIGASRKRRRIEDFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR017961DNA_pol_Y-fam_little_finger
IPR043128Rev_trsase/Diguanyl_cyclase
IPR001126UmuC
IPR043502DNA/RNA_pol_sf