mRNA_4078 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348132
Unique Name	mRNA_4078
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348132 vs. uniprot
Match: A0A836CI39_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI39_9STRA)

HSP 1 Score: 1294 bits (3349), Expect = 0.000e+0
Identity = 1240/1240 (100.00%), Postives = 1240/1240 (100.00%), Query Frame = 1

Query:    1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 3720
            MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT
Sbjct:    1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 1240

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348132 vs. uniprot

BLAST of jgi.p|Trimin1|348132 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CI39_9STRA	0.000e+0	100.00	GRIP domain-containing protein n=1 Tax=Tribonema m...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_20	contig	Contig_20:320002..333336 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348132\|estExt_Genemark1.C_Ctg_200040
Description	Ran GTPase binding
COG category	U
Max annot lvl	121069\|Pythiales
EggNOG OGs	COG5171@1\|root,KOG0864@2759\|Eukaryota,1MIIJ@121069\|Pythiales
Evalue	6.52e-05
Seed ortholog	65071.PYU1_T002368
Hectar predicted targeting category	other localisation
TranscriptId	348454
Track	FilteredModels1
ProteinId	348132

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348132	gene_4078	Tribonema minus UTEX_B_3156	gene	Contig_20 320002..333336 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4078_1	exon_4078_1	Tribonema minus UTEX_B_3156	exon	Contig_20 320002..321186 +
exon_4078_2	exon_4078_2	Tribonema minus UTEX_B_3156	exon	Contig_20 321791..321841 +
exon_4078_3	exon_4078_3	Tribonema minus UTEX_B_3156	exon	Contig_20 322448..322558 +
exon_4078_4	exon_4078_4	Tribonema minus UTEX_B_3156	exon	Contig_20 323227..323289 +
exon_4078_5	exon_4078_5	Tribonema minus UTEX_B_3156	exon	Contig_20 323546..323617 +
exon_4078_6	exon_4078_6	Tribonema minus UTEX_B_3156	exon	Contig_20 324407..324519 +
exon_4078_7	exon_4078_7	Tribonema minus UTEX_B_3156	exon	Contig_20 325351..325540 +
exon_4078_8	exon_4078_8	Tribonema minus UTEX_B_3156	exon	Contig_20 325649..325819 +
exon_4078_9	exon_4078_9	Tribonema minus UTEX_B_3156	exon	Contig_20 326550..326729 +
exon_4078_10	exon_4078_10	Tribonema minus UTEX_B_3156	exon	Contig_20 327438..327506 +
exon_4078_11	exon_4078_11	Tribonema minus UTEX_B_3156	exon	Contig_20 327756..327911 +
exon_4078_12	exon_4078_12	Tribonema minus UTEX_B_3156	exon	Contig_20 328091..328132 +
exon_4078_13	exon_4078_13	Tribonema minus UTEX_B_3156	exon	Contig_20 328299..328361 +
exon_4078_14	exon_4078_14	Tribonema minus UTEX_B_3156	exon	Contig_20 328813..328917 +
exon_4078_15	exon_4078_15	Tribonema minus UTEX_B_3156	exon	Contig_20 329681..330228 +
exon_4078_16	exon_4078_16	Tribonema minus UTEX_B_3156	exon	Contig_20 331045..331095 +
exon_4078_17	exon_4078_17	Tribonema minus UTEX_B_3156	exon	Contig_20 331207..331405 +
exon_4078_18	exon_4078_18	Tribonema minus UTEX_B_3156	exon	Contig_20 331856..331969 +
exon_4078_19	exon_4078_19	Tribonema minus UTEX_B_3156	exon	Contig_20 332377..332452 +
exon_4078_20	exon_4078_20	Tribonema minus UTEX_B_3156	exon	Contig_20 333075..333336 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4078	CDS_4078	Tribonema minus UTEX_B_3156	CDS	Contig_20 320002..321186 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_4078	UTR3_4078	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_20 333239..333336 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348132	Trimin1\|348132\|estExt_Genemark1.C_Ctg_200040	Tribonema minus UTEX_B_3156	polypeptide	Contig_20 320002..333238 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_20:320002..333336+
coding sequence from alignment at Contig_20:320002..333336+

spliced messenger RNA

>mRNA_4078 ID=mRNA_4078|Name=jgi.p|Trimin1|348132|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3821bp|location=Sequence derived from alignment at Contig_20:320002..333336+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCAAGAACTTTGGAGACGTGTTTTCTGTGCTTGATCTCGACCAGCT
CGCTGACGAGGATGACAAGCAGCAGAAACAGAGCTCCAAGGTACAGCAGC
AGCAGCAGCGGCAACAGCAGCAGCAGCAGCAGCAGCCGCCGCAGCAGCAG
CAGCAACAAAAAAAGCAGCAGCTGTTCGCATCGCCAGCTTCAGCCACCCA
GCCGCAGTCTCTGCTAGGCGACACCCTCACTGGCTTCTGGAGCACGCCAA
CGCGAGCTGCTGCCGCACAGCCGCCGCCGCAGCAGCAGGCGCAGCAGCAG
GAGGTGCAATGGCAGCAGGCAAAGCCCTCCCCTCAGGCGGCGCCGCCGCC
CAGGAAGCGCACCCCTGCTCGCAGGAAGCCGCAGAGCGGCGCTGCTGCGA
CCGAAGATGGCTGGGAGGAGTGGGATGATGGCGCCACGGTGCCCGACAGC
AAGCCAGTTGACATTACTGCTGCTGCTGCTGCTCATGCCCCGCCGCCAGC
TCCAGAGACGCCCAAAGCGACCCCTGCCATGCCTCTGCCATCTCCGCGCC
CGCCAGCAGCAACGCCGCCGCCCGTGGCAGCAGCGGCAGCTGCGGAGCCG
CCTCAGCAAGGCGCAGCGGCAGCCGCCGAGATGAAGGCGAAGCTCGACAC
CGCGCTAGGTACGCTGCGCAGGCTGAAGGGGGTGGTGCTGCAGCGCGAGG
GCGAGCTGGCGGAGGCGGCGCGCGCCGCGGAGCGGTCCGCGCAGGGACGC
GCCGAGCTGCAGGCCGAGTGCGCGCAGCTGCAGCGAGCGCTGTCACAGCA
GCAGCAGCAGCAGCAAAACGCCAATGGTTTCAATTCAGACGAAGTGGCAG
CCGCCGGCTCCTCCGCCTCTGACGGTGTTGCCGGTGGCGGCGGCACGTCG
GCAGCAGCGGCGGCAGCAGCAGATGACAAACCCGCAGGCGCCGATCGGGA
CGAGCCCACTTGCGCTGACGCGGAGCAGCAGCCGCAGGGTACGGAGTGCG
AGGCTCAGTCGTTGGCGGCGCGCTTGGCAGCAGCGGAGGCGCGCAATCAG
GAGCTGGCGGCAGCGCTCAACCAGCAGCAGCAGTGCGATGCATGCAGCGC
GCAGCGGGCGGCGGTGATGGGCGCTGCGCTCGAGGAGGCTGCTGAGAGTG
CGCAGCTTGCAGGCGCGCTGGAGGAAGCGCGACAGGCAGCGGCGCTGGCG
CAGCAGCTCCGCCAGGCCCTGGAGTCGGCAGAGCAGATGCACGAGTACGC
GCTGGCGGCGGCGGCGGAGGCGGCCGCGGCGGATGCGCTCGCGCACGCAG
CCGCGATGGAGGCCGTCGAGGGACGGCTGGCGGCGGCGGATGAAGAGGCG
CGGCAGGCGCGCGCGGCAGCAGCGGGCGCGGCGGAGTGCATGCGGCGGCT
GGAGGGGCAGAGCACCGATGGCATGAAGCTACTTGATGTGGTGGACTGCT
GTAGTGCGTGCTCGGCGGCTGGAAAGGCGGAGCTGGACGAGTCGCAGGAG
CTCAGCGCGCAGCTGCTGCGGGAGCTGGGCAGCGAGCGCACAGCGGCGGA
GGAGGCTCAGCGGACCCTGGAGCAGCAGGTCGCTGCCGCGCTGAGGCGCG
TCGAGGAGAGCGCTGCAGCGGCGGCGGAGGCCGAAACCAGGGCGCGGAGC
GCGGAGGCAGCGGCGGCGGCGCTGGAGGCGCGGTCCTCGGACACCGCAGC
AGCAGCGCTCGCCGACAGGGCGTCGCTCGCGCAGCGCGCGGCGGACGCGC
AGGCGCGGGTGGCAGCGCTCGAGCAGGAGCTGCAGGCGCGGGTGGCAGCG
CTCGAGCGGGAGCTGCAGTTGAGGTCCTGGAGCGTCGCACGGGTCCATTA
CGGATCAGAATGTGTATGTGGGGGGACCGCGATTGTACTGGGGGCGAATG
CGCCGTGCTGGCGGAAAGCACGCGCACGGGTGGCGGCTCTTGGGCGGGAG
CTGCAGGGCGCCACGGACCGCAAGCAGCAGCTCGAGGCGCAGCTCTCGCA
GTACAAGCTGCGCTCGGTGGAGGCGCTGCGGAAGTTCACGGCCCAGGCCG
CGGAACTGTCCGCGGCGAGGAACGCGCTCGAGGACGAGGCGGACGCGCTG
CGCGCCGCCGCGGCGGAGGCGCAGCGGGCGGCGCAGTTCGGTCATCGCGC
GGAGGCGGCAGCAGCCACCAGCAACTTCCACAGCGTCTTTGCGATGATCC
TCCCGGACGCGCTGACGCAAGCGGCGGCGAGTGCTGCTGCTGCGGCGGCG
GCGCAGGAGGACCTGGGGCGCGCCGAGGCGGCGCGCGCGTCCGCTGAGAC
AGCGCTCGCCGACGCCGCCGCTGCGCGCGCCGCAGCTGTCAGCTCCGACA
GGCACGCGCAGGCTGCGCGCGCCGCCGCCGCCAGCTCCGACATGGCGGCA
CAGGCAGCGCTCGCCGATGCCACCGCTGCGCACGCCGCCGCCGCCAGCTC
CGACAGGGACGCGCAGGAGCAGTGCGCGCAGCTGCAGGCGCGGGTGCTGG
AGCTGGAGCGGCAACGCTCAGCGCTGGAGGCGCAGGCGGCGGAGGCGCAG
CGCGCGCTGGCAGCAGCGCAGGCGCGCGAAGCAGCAGCGCTCGCGCAGCG
CCTCGGCAGCCCCGCCCCCGCTTCACCCTCCGCTGCCAACGGCTACTTTT
CGAGCGGCGGCGGCGTCGCGATCGCCACGCCGCCGCCCGCGCGCCGCGTC
TCCTCCTCCAAGCTGCTGGCCTCCGGCAGCGTCACGCCCTCTGCCGACGG
CGGCGCCGCGCTGGGCGGACACGCCCTGAACGGCAGCAGCGGCGGCGGCG
GCGCAGGAGGCGGCGGCGACGCTTTCGGTGCCGGCAATGGCGTCAGGGCC
GATGGGGACGTGGTCAGCAGTGGTTATGGCGCTGCTGGCAGCGGCGGCGG
CGACGGCGGCGGCGGAGGCGGCAAGGGTGCGGGCGGTGGCGATCCCTCTA
TGACGAAGCTGCGCGCCAGCAGCAGTTTCGCCGGCAGCGTGGACGGTGGC
GGCAGCAGCAGCATTGACGGCAGTGAGCACGGCAGGCGCGCCCAGCAGCA
GCAGCAGCAGCAGCGGCAGCAGTTATGGAACGTGCACACGCCGCGCCGCA
GCCTGCCCGGCAGCTTCAGCATTGGCGGCGGCGGCGGCGCGACGCTGGCG
GCAGCGGCAGGCGCAGCGTCCATCGGCGAAGACGGCGGCGACGTGGGCGC
GGCGCTGGCGGCGGTGGCGGCGGAGGCGCGCGCGCTGGCGCGCGAGGGGG
CGGCGCTTGACGCGGAGGCGGCGCACGCGCAGGAGGGCGACGACGCGGCG
CGGCGCGCGCAGCTGTTTCTCGTCGACCAGCTGCAGGAGGCGCGGCGCAG
GGACCAGGCGCGCGCGCAGGCGCTCACGCGAGAACTGGAGGGCGCGCTGC
GTGCGCTGGAGGCGGCACAGGCGACAGAGAGCACCCTCAAGAACAAGCTG
GAGAAGTTTGAGAACGGCGTCAGACGCGAAGAGGTGCTGCACAAGAGCCC
TTCGGCGCACGTGAATCTGGAATACCTCAAGGCAGCCGTGGTGCGGTACA
TGCAGTCAGACGAACCGAGCGAGCACAGCCGGCTGCTGCCCGTGATAGCC
ACGATCCTGCAGCTCAGCACCTCCGAGCAGCAGGCGGTGGCCACGTCAAT
AAAGCGGCGATCCAGCGCGTCTGCCGTGCTGCCGTTCAGCTGGTTCCCAG
CGGGCGGCCCCGGCAAAACCTAGGGTTAGGGTTATGGGTAGTGGTACTTT
AGTAATGGTCGTTGCATCTGTGTTGTGTGCATTGGCTTTCCCCTCCGTGC
TCTCCTGTAGACACAATGATA

protein sequence of jgi.p|Trimin1|348132

>Trimin1|348132|estExt_Genemark1.C_Ctg_200040 ID=Trimin1|348132|estExt_Genemark1.C_Ctg_200040|Name=jgi.p|Trimin1|348132|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1241bp
MFKNFGDVFSVLDLDQLADEDDKQQKQSSKVQQQQQRQQQQQQQQPPQQQ
QQQKKQQLFASPASATQPQSLLGDTLTGFWSTPTRAAAAQPPPQQQAQQQ
EVQWQQAKPSPQAAPPPRKRTPARRKPQSGAAATEDGWEEWDDGATVPDS
KPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAATPPPVAAAAAAEP
PQQGAAAAAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGR
AELQAECAQLQRALSQQQQQQQNANGFNSDEVAAAGSSASDGVAGGGGTS
AAAAAAADDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEARNQ
ELAAALNQQQQCDACSAQRAAVMGAALEEAAESAQLAGALEEARQAAALA
QQLRQALESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEA
RQARAAAAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQE
LSAQLLRELGSERTAAEEAQRTLEQQVAAALRRVEESAAAAAEAETRARS
AEAAAAALEARSSDTAAAALADRASLAQRAADAQARVAALEQELQARVAA
LERELQLRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRE
LQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADAL
RAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAASAAAAAA
AQEDLGRAEAARASAETALADAAAARAAAVSSDRHAQAARAAAASSDMAA
QAALADATAAHAAAASSDRDAQEQCAQLQARVLELERQRSALEAQAAEAQ
RALAAAQAREAAALAQRLGSPAPASPSAANGYFSSGGGVAIATPPPARRV
SSSKLLASGSVTPSADGGAALGGHALNGSSGGGGAGGGGDAFGAGNGVRA
DGDVVSSGYGAAGSGGGDGGGGGGKGAGGGDPSMTKLRASSSFAGSVDGG
GSSSIDGSEHGRRAQQQQQQQRQQLWNVHTPRRSLPGSFSIGGGGGATLA
AAAGAASIGEDGGDVGAALAAVAAEARALAREGAALDAEAAHAQEGDDAA
RRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKL
EKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIA
TILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT*

mRNA from alignment at Contig_20:320002..333336+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4078 ID=mRNA_4078|Name=jgi.p|Trimin1|348132|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13335bp|location=Sequence derived from alignment at Contig_20:320002..333336+ (Tribonema minus UTEX_B_3156 )
ATGTTCAAGAACTTTGGAGACGTGTTTTCTGTGCTTGATCTCGACCAGCT
CGCTGACGAGGATGACAAGCAGCAGAAACAGAGCTCCAAGGTACAGCAGC
AGCAGCAGCGGCAACAGCAGCAGCAGCAGCAGCAGCCGCCGCAGCAGCAG
CAGCAACAAAAAAAGCAGCAGCTGTTCGCATCGCCAGCTTCAGCCACCCA
GCCGCAGTCTCTGCTAGGCGACACCCTCACTGGCTTCTGGAGCACGCCAA
CGCGAGCTGCTGCCGCACAGCCGCCGCCGCAGCAGCAGGCGCAGCAGCAG
GAGGTGCAATGGCAGCAGGCAAAGCCCTCCCCTCAGGCGGCGCCGCCGCC
CAGGAAGCGCACCCCTGCTCGCAGGAAGCCGCAGAGCGGCGCTGCTGCGA
CCGAAGATGGCTGGGAGGAGTGGGATGATGGCGCCACGGTGCCCGACAGC
AAGCCAGTTGACATTACTGCTGCTGCTGCTGCTCATGCCCCGCCGCCAGC
TCCAGAGACGCCCAAAGCGACCCCTGCCATGCCTCTGCCATCTCCGCGCC
CGCCAGCAGCAACGCCGCCGCCCGTGGCAGCAGCGGCAGCTGCGGAGCCG
CCTCAGCAAGGCGCAGCGGCAGCCGCCGAGATGAAGGCGAAGCTCGACAC
CGCGCTAGGTACGCTGCGCAGGCTGAAGGGGGTGGTGCTGCAGCGCGAGG
GCGAGCTGGCGGAGGCGGCGCGCGCCGCGGAGCGGTCCGCGCAGGGACGC
GCCGAGCTGCAGGCCGAGTGCGCGCAGCTGCAGCGAGCGCTGTCACAGCA
GCAGCAGCAGCAGCAAAACGCCAATGGTTTCAATTCAGACGAAGTGGCAG
CCGCCGGCTCCTCCGCCTCTGACGGTGTTGCCGGTGGCGGCGGCACGTCG
GCAGCAGCGGCGGCAGCAGCAGATGACAAACCCGCAGGCGCCGATCGGGA
CGAGCCCACTTGCGCTGACGCGGAGCAGCAGCCGCAGGGTACGGAGTGCG
AGGCTCAGTCGTTGGCGGCGCGCTTGGCAGCAGCGGAGGCGCGCAATCAG
GAGCTGGCGGCAGCGCTCAACCAGCAGCAGCAGTGCGATGCATGCAGCGC
GCAGCGGGCGGCGGTGATGGGCGCTGCGCTCGAGGAGGCTGCTGAGAGTG
CGCAGCTTGCAGGCGCGCTGGAGGAAGCGCGACAGGTGAGATGCAAAGTT
CGGAGCATCGGCTGATCACCCCTGAGCGATGCTGAGTTGCAGTTGCAGTT
GATCAAGTCTGTTGGAGCTAGCCAGAGTGGCGCTGCGTGCAGGGGGGTGG
GGTAGGAAGGCGGTGGGAGAGCGGGGAGGCTGCGGTGCCCCTTCTCGCAT
TGCATGGTGCACCGCCTCAGTTGCGTGCTGCCGTTAGGCGTCATTGTGCA
GGTGGATGGTTTCACTGTGAGCCATTGCAGGCGCGGCTCTCGACACATGT
TTGTCCGACGGGCGCCTCTAGGCGGGGTTGCTGCAGGTGCACTCTGGACT
GCATTGACGGAGCACCGCGTTCGCCTCGCAACCGCTGGCTGTGCTCTCTG
CGCGGTAACCACCCAAAGGCGAGCAAATCACAGCAGAGGGCTCTACATCA
GCGCTCAGCGTCGCCCTGGCAGCTGCTGCCGCCTTCAGCCAACTCGCCCT
GCCACAGCGGCCAAACGCCATGGCCACCGCTGGCCTGCTTCGCGTGGGTC
AGTGCATTTCAGTGTAGGTGTCTTGAGTGTTGAAGTTTGTCAATGCTTCT
TGCAGTTCGTCAATGCTTCCTCCGTGCGATTGCTCGCAGGCAGCGGCGCT
GGCGCAGCAGCTCCGCCAGGCCCTGGAGTCGGCAGAGCAGGTGCGCAGCA
GCACTCAGCAATTGACGATTGGTGACCCGGTGGCTGCAGAAGGGGGGCAT
TGGGCATGAGGAACGCGCTCAGAGATGCAGATTGTTGAGAGTATGGGTTG
CGGGCCTTGGTCTTGAAGCCCGTCCGGAGGGTCACAGCAACGTTCTTGTA
ACCGTTTTGTAACCGTTGAGTGTACGCCCATGTGTGCGCAATGCAATGTT
TTCGTCGCATGATGTCGCTGGTTTATCAGGCGAATCACACTCTTCAATAA
GTCTAGAGTCTTTACAGCACTTTTTAAATAAAGCTACTCAAGTCAAACTT
CCACAAACAGACAAAAGCGCAATCACTACTGCTCGCCTTGACGACCTGCT
CACCACACTCAAGGGCGCAGTAGTCAGAGCCACCAGACAATCTATGAGTG
CCAGAGGCTGGCTTGCGCATTAGCATTGTCGGTGGCCACGTGCTACACAC
ATGTTGCCGTTGCCATCGCCTAAACACATTGCTGAAGGCATCATCACCTC
TTGGGGTCAGGCTATTTAGTGCCTGTTGCTGCTGCCGCTGGCGATAATGC
TGGTGTCAATGCTCAACACCTCAGCCCTTGTGTCGTCGCGCTGCAGATGC
ACGAGTACGCGCTGGCGGCGGCGGCGGAGGCGGCCGCGGCGGATGCGCTC
GCGCACGCAGCCGCGATGGAGGCCGTCGAGGGACGGCTGGCGGCGGCGGA
TGAAGAGGTGAGCGACCGCATGTATGCACATATGTATATGTATAGCCTAT
GTACTTCAAAAAGAATGTATGCGCTGCTGCACCCCTGCGTGGCGGCCATA
CTGTAAACAGCCTGCAGCATTTCACACGTATTCATCGTGCCTGTGCAATG
CGCCAATTTTGGTCCATGTAGGCATCGGCGATGCCCCGTGTGTTCATGAT
CGCCGACGCTTTCCTAGACGGACTATGCTGCGCCAACGAGCCTCTAAGAG
CAACTGCTAACCCCAACCCTAACTTCCATTGCGCGCCTCGGCATCACTGC
TCAGCACAGCACGTAAACTGCAAAAAGGTCAACGACGTGCGCACAGCTGC
CTCGTCGCCATTGCGCTGTTCACACAAAGTCGGAAAAAAAAAGAAAGAAA
AAGAAGTACACCACGACCACCGGAAAGTTCCCACGTGCCACAGTGTCAGT
GCTCAGCTAAGCACGTAGGTAAAGCAAACAACAGCTCAGATACCATATAC
ACGGCTGCTCCATCGCCATCGCGCTGCGCGCTCAGCGACCGTTGCCGCGC
ACGCCGGCGCGTGGGTGCCTTGGTGATCAGCACAGTGTGTGGCGACGATG
ATCGCTCAAAGCTATGTTTTGTCGCCAGCGCGCCTCAACCATAAATGACC
GTTGGTCGCAACTGGTGCTGCCCAGGCGCGGCAGGCGCGCGCGGCAGCAG
CGGGCGCGGCGGAGTGCATGCGGCGGCTGGAGGGGCAGGTGACGCTCGGT
GCATGTTGAAGTTACCACTTCCTCAATGCGTGACAGAGGCCGTAGTTTAA
GCCGAGGTCCGCGCCGCTGACTACAGTCACGCGCGCGACGGAGGTCATGA
TTTGTGACTATCATCGGAGGAGCTTTGCGGAGGGGGGGTGGCAGCGGGGG
CGCGGGCGGCAGCGGGAAGTGCAGCGGTGACGCTCCGCATGCCAGCAGCA
GCGCTCCGCGGCCCTGCGATGGCACACGCGCGCCCGCCCCACAGAGCACC
GATGGCATGAAGCTACTTGATGTGGTGGACTGCTGTAGTGCGTGCTCGGC
GGCTGGAAAGGCGGAGGTGACGCTTCACGCTGCCGATGGCAGCGCTCATC
GGCGGCGCCGCGCGATGGCACGGCTGTCTGAGCACTGTGGCGCCGACGGT
AGGAGTCTGGTGTGCTGCCAGTTGACGCAGGTTGGTCCGAAAAACCGCTG
TGACGGCGCCGTGGGCCACTTGAAGCACAGCAGCACGCTGCAGCGGCGGG
CATTGACGTGGGCAGCACAGCCACTGTGGGCGACCGTGTCGTGAAGTTTG
CAGGAGCCGAAGCGCTGGCAGGGGTCGCGGAGGCGTAGTTCCCGACTGTT
TTGAGGTGTGTGTGCACGATGCATCGGCTGGCATGAGGGACTCTTGACTC
GTGAGTGACTCAAGCCTGCCCTGGCGTGCTCGAACAGGGTCAAGCTGGAT
TGTTGCTTGAGCTGTGCTGCCCCTACAGCTGTGTGACGGTTGCGCGATGC
ATGCGCGCACAGATGGCGGGCACAAGTGGCTTGTGAATTCAGGAGTGACT
CACACCCTGCCTTGACGTGCTCCAACGGCGTGCGGACGGTCTGTTCTGGC
GCCGTGCTGGAGTGGTCGTCGTCACCGCTGTAAGACGAAGAAGCGCAGTG
TGCGACTCCCGCAGGAGCTCACTGGAGCTTGCTCATCTTAGTGGTTGCGG
TGGGGTTAGGTTAGGGTTTGGGGTTATGCGACTCCTCCGCACACGCTGCA
ACATCCTCAGCGCATCCGTGTATGGAGCTGATCCAGCAGCTTCACCTTCG
GGCCTGACTCAAACTTCAACTTCTTGTGCCGCACTTCAAACGTGACACCC
CACAGCTGGACGAGTCGCAGGAGCTCAGCGCGCAGCTGCTGCGGGAGCTG
GGCAGCGAGCGCACAGCGGCGGAGGAGGCTCAGCGGACCCTGGAGCAGCA
GGTCGCTGCCGCGCTGAGGTCAGTGCTCCGTCGCCATTGACAGTTTCATA
AAAAACTGCTCACGTATCACATTATCATGCTTCAGTGACCCTGAAGCGGC
AGGTCACCGCTGCGCCATGTCAGTGCTCACCGCGTGCGACGCTTTTCACA
AGGGCGGCGCTCAACGAGCAGCTGACGGCTGCGGTCAAGCGCGCCGCGCA
TCGCCCCCACGGTTCCGTCAACGCCATTTCATGCTGCACTCGTGCAAACC
GTGGTGCGCCCGATGTTGCGAGGGCCGCGCTCTGCCGCTGTGGCGACGTT
GTGCTGCTGTTGCGGCGTTTTGCCGCTGTGGCGCAGTGTGCATCACCTAC
ATACTACCGCACCATCATGCTGACGGGCTGTCCGGACAGAGCCAACGCGT
CTGCAAGCGCAGCCCCTGCAGCGATTCGTCTCTGTTGGCCTGCCACCGCA
AGGGCTACATTCATGCCCCCCCCCTGCCCTTCCCGCCTCGCTGTTGCAGA
TACGCCTTGTACAGCGGCAGGTTTCCATTGCAGATGCGCTGTGCCCCAAC
TCTGACCCTAACCCTAACCCTGAGGGGGTCGGGAAAGCAGTGTCGTGACC
ATGATGCTGTCATCCCAGGGCAAGGGGTCAGGCCTCACCTTCCTCTGACC
CTAACCCTAGAACTATTTCTTGGGCCGCAGCGGCGGGCGCCATCTGGAAC
TACGCGTGCAGCAGCGCTCGTGATCCTAGACGCGCGCGGCTGCACGAGTC
ATCAAATTCAGCTCCACACAGCAGAGTCAGCAACAGAGGGCCCACCTTCG
ATCTCCTGTCATGGCACCCCCCCTCCTCCCCCCCCCCGCCCCCCCAAAGG
CGCGTCGAGGAGAGCGCTGCAGCGGCGGCGGAGGCCGAAACCAGGGCGCG
GAGCGCGGAGGCAGCGGCGGCGGCGCTGGAGGCGCGGTCCTCGGACACCG
CAGCAGCAGCGCTCGCCGACAGGGCGTCGCTCGCGCAGCGCGCGGCGGAC
GCGCAGGCGCGGGTGGCAGCGCTCGAGCAGGAGCTGCAGGTCAGGTCTGA
GCCGCAGCATCGGTTCACTGGCTGTGAATCACTATGGTATAATGTGTATG
TGTGTACTGCAGCCGTACTGCGGGCGACGTGCTCGTGGAAGGCGCAGGCG
CGGGTGGCAGCGCTCGAGCGGGAGCTGCAGTTGAGGTCCTGGAGCGTCGC
ACGGGTCCATTACGGATCAGAATGTGTATGTGGGGGGACCGCGATTGTAC
TGGGGGCGAATGCGCCGTGCTGGCGGAAAGCACGCGCACGGGTGGCGGCT
CTTGGGCGGGAGCTGCAGGTGAGTCTGGAGCACCGCATCAGTCCATTGCG
GTTCAGCGTTGGTTAGGTGCGCAGGCTGCTGACGCTGGCAGTGGCGGCGC
ATCGCCGATCTCTTTCCAAAGGTCTTTCAACGTCCCCTCGCGGTACTTGT
TGGCTATCGGTATCCCGCTTGTGGTCACGCGCTTGAGCCGCAATCTCAAG
CAACCTCACCACAGAGGCGCAGGTGGAGCGGTTCAAGGATCAGGGCTAGG
GTTAGGGTTAACCTGAACCCTAGCTAACTCTGAGGCGCTGCTGGCTGACA
CAGCAACACACGCGTGCGTGAGCGCGAACGCCACCGAGCCCGCCATCAAC
AGCAACTTGCAGACGGCGAGACAGGAATTGGAGGGAGCGCGCGAGGCCAC
CAGAGCGCTGGCGTTGATGCTCTGCCTTTCACTCTGCGCACCTAATTGTC
ACCATTGCTCAGCAGCACACCTGTCCAACCAGACAGACGGCACCCGCGTG
TTGGCAATGGCCACCTTGTCTCCTGCGCAAGCGTCGCGCTTCAGGGGTAG
GGCCGTTACACCGCATGTAAGTGTAGCCTCCGCCTTTGCACTCGCGCACG
AAGGATGCCCCACGGACCGACACACGGCGCGTAACGATAGCCTCCGCATG
TGCACTCACGCGCGCAGGACGCCGCCGCCTCAGAGTCACACGCCCGTTAC
ACCGCATGTAACTGTAGCTTCCGCCCTCATTCGCACTCACGCGCGCAGGG
CGCCACGGACCGCAAGCAGCAGCTCGAGGCGCAGCTCTCGCAGTACAAGC
TGCGCTCGGTGGAGGCGCTGCGGAAGTTCACGGCCCAGGCCGCGGAACTG
TCCGCGGCGAGGAACGCGCTCGAGGACGAGGCGGACGCGCTGCGCGCCGC
CGCGGCGGAGGCGCAGCGGGCGGCGCAGGTGCGCTGCTTGCTTGTAGCTT
GCGTGCTCTATGTGTGTGCTGTCTTTGTGAGCCGTGTGAGTATTGGCAGG
GGGCGGCGAGCACTGGATGCCTGCGCAATTGCGATGTCACCCCTCGTACT
CGCCTGACTTCAACCTCAAGCCTGCGGCAGCGGCTCAGCAGGCACGCCGT
GCTCGCTCCTACATTGCATGCTATCTCATGCCGTGTTCATGGCTCATACA
AGATGCGGCAAGGGGCGTCGGGCAACTGATGCCTGTGTGACCGTAGTGTT
TAACTTCACGCCGACCTGATTTCAACTCGAACCCGCGGCGGAGGCTGAGC
CAGCAGCGCAGGTGCCTGCGACCACCCACTTCAACATTGCGTGCCATCGC
ATCCTGAGGACATGGTTACCGCGACGGGCACCAGCTGCAAATGAGACCCC
TGACAACGTCAACTTCCGCGCAAATGTAGTCCTAACCTTGATCCTTCTTC
AGACCGGAAGGCGATCTGTCGGTGAGCCATGCGGCATCTGCAGCTGCGAC
ATCTTTAGCCGAGGCTCAGCAGAGTGTGCAGGGATGAAGGCCTGCCGCGT
CCGCCGCGCAGCGGCCCGTGGCAGTCCTTGCACATCGACGCGATGCGCAC
CAGCGGTCACTCTGAGCACTGTGTCGCGCCCTGCCATGATTGCGCGCCGC
AGCAGTGACCAGCGCAGTAGCCGGCGCATGCCGCAGTTCGGTCATCGCGC
GGAGGCGGCAGCAGCCACCAGCAACTTCCACAGCGTCTTTGCGATGATCC
TCCCGGTCAGGCACGCGGGACACTGTCCGCAGCGCTCCACGCTGCAAGTT
CAACAGCCACGCCATACCTCTTCATCTCCATCTTCAACCCTGACACCTTC
TCTCTGCCCCACCTTCTCTCTCTGCCGGCGGCGTCGCCGCAAGCAGCGCT
CCATGCTGCAAGTTCAACAGCCGTACCATACATGATCTTCATCTTCAGCC
TTGACACCTCCCGTTTGCCGCACCTCCTCTCTCTGCCGGCGTCGCCGCAA
GCAGGACGCGCTGACGCAAGCGGCGGCGAGTGCTGCTGCTGCGGCGGCGG
CGCAGGAGGACCTGGGGCGCGCCGAGGCGGCGCGCGCGTCCGCTGAGACA
GCGCTCGCCGACGCCGCCGCTGCGCGCGCCGCAGCTGTCAGCTCCGACAG
GCACGCGCAGGTAGGTGTGCGCGTACGCTGCGGGCGCGCTGCACTCGCGA
CTGCAGTACCTATTTGCGGGAGTGATAATGTGACACCAGATACTTCGGAA
GGCGCAAGTGAAGCGCTTTCGGGGTGAGGGTAGAGTTGGGGACCAGGCGC
AGAATGGGTACGCAGCCAGCAAGACGGCAATACGCTGAGGCTGCGCGCGC
CGCCGCCGCCAGCTCCGACATGGCGGCACAGGTATGCTGGCGCCTGCTGC
GCTCGCGACTGCAGTACCTAATTGCGGTGAGGATCATGTGGTACCAGATG
CGTTGGAAGGCGCAAGCGAAGCGCTTCGGGGTTGACATGAGAGTAAGGGA
CCAGGCGCAGAATGGGTACGCAGTATGCAAGGCAGCAATGCGCTGAGGCA
GCGCTCGCCGATGCCACCGCTGCGCACGCCGCCGCCGCCAGCTCCGACAG
GGACGCGCAGGTAGGTGCACGGGTGCGCTGCGCTTGCGACTGCAGTACCT
AATCGCGAAAGTGATCTTCTGGTACCAGATACTTTGGAAGGTGCAACTGA
AGCGCTTTAGGGTTGTGAGGGAGATTAGAACAAGGGTTAGGGCTTGGGTC
AGGACAGGCAAGCGCAGGTACGTGCCGCTGGCGCGGCGCTGGGTGCGTTT
GGAGCACTTGGTCAATGGAGTGACCATCTATTCTTGTCACGGCGACACTT
CAAATCGGCAGATGAGATTCCAGGCGGGCGGGGAAAGGGGGGGGGAGGGG
GGGGGGGTGAGGCCCGAGGCCTGTAGAGCAGCTGCTGGCGACTCTCTCTG
CACAATACCCTCAGGGGAGGAGACCGTCATCGAACGTCTTCCTTTCGCTT
TTGTGGGGGGCCCTGCACGCCTCATCTGTCTGTTGTTGTCGCGATGACAC
CCGTGTTGCAGGAGCAGTGCGCGCAGCTGCAGGCGCGGGTGCTGGAGCTG
GAGCGGCAACGCTCAGCGCTGGAGGCGCAGGCGGCGGAGGCGCAGCGCGC
GCTGGCAGCAGCGCAGGTCGGTGCTCTTGAGCATCCTGTTTCCTGTTCTG
TCCGGTGCTTCTATGTGTTACGGCAGACTTGCGGCGAGGCACCTCTCCTT
CGGCAGCAAGACCCCAACTTACCAGCGCGCAGCTTGTCATGCCGGTCGCG
CTGGCGTCAGGGCTCAGGGTGATGGTGTGGGGTCAGGGTGGGGTCAGGGT
GTGGGATCAGGATTAGGGTTTGGCTGCGCCGGCGCATTCTCGCACAGACG
CTGCATCTGGTGTGTCGGCGGCCAGCACCAGTCGCTGCAGTATCAGTTCC
GCACGCCTGTGCCCTCGCACAGGCGCACGACGCAGCGCTCATGATTCCAC
CTGCGCATCCGCCGTGGTCCTAACCCTCATTCTAACCCCTCAGCGGCGCT
GCCATCGCGGCGCTGCCCCCCCTTCCCCCCCCTCCCCCCCCCCATTCCGC
AGCTGAGGGTTAGCACTGGAGTTTAGGTCGCACTCCTCTTTCGCTGCAGC
GCACACCGTACAGCACCCACCATGCTCTACAGCAGCAAAACATGGAGTGA
GATGCGAGATGTCCTCTTGGCGCGCCTCTGAGCTCTGCGCACGCACAGCG
AGCAGTCCTGGTGGTGCCACTGCCTACCGCCAGCGATGGCCCTGCCCACG
GAGCAGAGCACGCGTGCAGCAGTGCAGCAACCAGCCATCGGGCTGCTGCT
GCTGCCGCCAGCAACATCTACTCACTCAGTACTTACCTACCCCCAACCCC
TTGTCCCCCCATATGCACCTCACCTTCAGGCGCGCGAAGCAGCAGCGCTC
GCGCAGCGCCTCGGCAGCCCCGCCCCCGCTTCACCCTCCGCTGCCAACGG
CTACTTTTCGAGCGGCGGCGGCGTCGCGATCGCCACGCCGCCGCCCGCGC
GCCGCGTCTCCTCCTCCAAGCTGCTGGCCTCCGGCAGCGTCACGCCCTCT
GCCGACGGCGGCGCCGCGCTGGGCGGACACGCCCTGAACGGCAGCAGCGG
CGGCGGCGGCGCAGGAGGCGGCGGCGACGCTTTCGGTGCCGGCAATGGCG
TCAGGGCCGATGGGGACGTGGTCAGCAGTGGTTATGGCGCTGCTGGCAGC
GGCGGCGGCGACGGCGGCGGCGGAGGCGGCAAGGGTGCGGGCGGTGGCGA
TCCCTCTATGACGAAGCTGCGCGCCAGCAGCAGTTTCGCCGGCAGCGTGG
ACGGTGGCGGCAGCAGCAGCATTGACGGCAGTGAGCACGGCAGGCGCGCC
CAGCAGCAGCAGCAGCAGCAGCGGCAGCAGTTATGGAACGTGCACACGCC
GCGCCGCAGCCTGCCCGGCAGCTTCAGGTGCGCTGCCGCCTCCTATGTAA
CTGCCGTTGCGTAGCCGGCCGGCAGCAGCGGCTGCGAGGCTCCCTGTCAC
GAGTTGCACAATTTCGCGCTGCGCCATTGCCTCGACCGTGCGCTGCACAG
GTGCCGACGCCCGCGGCGACGCGCGCCCAAGCGCCGCAGTCATTGAACGC
GACGCTCGCGAGCGGCGCATTGACCGTATGCATGTGATGATGTCAGGCGG
GCCAGCTGCAAGCTAGGGTGCGTCCCGTTTGGTGTCCAGGGCTAGAGCCC
AGATTCGCACCGCTGCACCGGCGTGGCGACGCACTCACGCGCGCCGCTGG
CATTTGTCCACACGTCGCCGACGCGCTGTGAACCCCACATCGTGCTGTTG
AATCGTCCGCCTCCGCTCTCCATACGTGTCGCGTTCGACAGACAGTCGGT
GCGTGGGCGCAGGCAAGGCGGCGGCAGGTGTGGGCTGAAGGATCAACATC
AGCCCCGTCTTGCGCTTGCATCTGAGCCATACAGTACATTTTATGGCAAA
TGCGACAGGCGCTGCTTATTACGCGCACAGTTCCATCCATCGGAGCGCCG
CAGGGGTGCTGCACACCCGGGGACACCGCCGGCAGCGGCCGCTGGCGGCG
ACAATGGCGACAGTGGTGCGGGACCCACATGTACACACACGTGTCTATGC
TGCTAGCTCTTGGGTTGGGGCTAGGAGTCTACTACCCTACTCACCTTGCC
CTTGCTCTGCACCATACGCCACAGTACGCAGCTTCTTGGTTCTCGGTTTA
GCTCCACACACACACACACACACACACCCCTCCCTGCGCGCAGCATTGGC
GGCGGCGGCGGCGCGACGCTGGCGGCAGCGGCAGGCGCAGCGTCGTCCGC
CTACCCACCGCCCTCGCCAGTCGTCGTAGCGCTAGCCGACAAATGTCTCC
AGTTCACGAACCCATCGCGCACCCGTCTCATCTCCCCCCTCCCCCCTGTG
CGCAGCATCGGCGAAGACGGCGGCGACGTGGGCGCGGCGCTGGCGGCGGT
GGCGGCGGAGGCGCGCGCGCTGGCGCGCGAGGGGGCGGCGCTTGACGCGG
AGGCGGCGCACGCGCAGGAGGGCGACGACGCGGCGCGGCGCGCGCAGCTG
TTTCTCGTCGACCAGCTGCAGGAGGCGCGGCGCAGGGACCAGGCGCGCGC
GCAGGTGAGGCACAGAAGGGGGGTGATGGTGGTGGTTGAGGCGCGGAAGG
GGGGGGGGGGGGGGGGGGGGGGGTCAGCTTCAAATTTAACTTCAACAACG
TGTCATCTTTTAACTTTTTGTATGAAGTTCGCCTTGACACCAGTCCTAGG
CCTGTGTATGCACGGTGGCGCAGAGCTGATACATAATGTATACTTCTGAA
GCTTACGTATCATACAAATGAAAGCATCAGGCGATATGTCATGTTAGTAC
ATGATACGCATTTCTCTGTGAGCAGGCCCTTGCGCGAGAGGTGGAGGGCG
CGCTGCAGGCCCTGATGTTAGGGTTACTTAGGTCTATGGTTGCGATAGCA
ACGCAACTCTGGCCCTGACTAGAGGTAATAGATAGCATGACGTCACGTCA
GGCCACATAACATACTAGTATATCATACATGAAGTATGTGTTATCTGTGT
GCAGGCGCTCACGCGAGAACTGGAGGGCGCGCTGCGTGCGCTGGAGGCGG
CACAGGCGACAGAGAGCACCCTCAAGAACAAGCTGGAGAAGTTTGAGAAC
GGCGTCAGACGCGAAGAGGTATGTGTGGTGATGGTCACCATGTTGAGGTA
AATGAGCACTGGGGGTACATGATTATATCATCCATCATGCAGTCTCGCGG
TCCCATATACTCGAAGCATGCGAATATGTACTTCTTCAGCCGAAGTTGCG
CCTCTTCCGATGCCAGAGGCTAACCCCAGCCCTGCGGGGCAAAGCCGTTC
GTACACTTCAACAGCGTGGACAATACATACATGCCTGCATCTGTCAAGGA
CTGTGACTGTCAAGCTGCCCAGTCCCCATGCGTGCGTCAGAATACGCGAT
ACATGCCTGCTGCGAGCCGCTGCAGCTGCCTTTCGCAGTGGGGGTGCCTG
AAGTTGAACTCAAGCTTCAATTTGATGTTGAGCCTTGAAGTTGAAGTCAA
GCGCGTGTGTGTCCCCCCGCCGCAGGTGCTGCACAAGAGCCCTTCGGCGC
ACGTGAATCTGGAATACCTCAAGGCAGCCGTGGTGCGGTACATGCAGTCA
GGTGAGACTTCAAGTGACAGTTCAACTTCTGGTTATTATCAGGGGGTGAC
GACCACCATGAGTACGCTCCTGCGCTTGTTGAAAGCCAGGACGCAGGTCG
CTTACCGGTGCGTACGGTGCCATAGGAACTTGCCTCAGGCCCCCTTGCGG
TGCCATGTAGACTCGCCTCACAGCGGCGGCGCGAGGCGGTGCGGAGCGAA
GCGCGCTGCTGAGAAACATTGCGCAACTAGCGCGCTCATGCCATGTATTA
CTGTTTTATTTCCTTTGAGCACAGAAGGGTCTGGATGAATGATGTCACGC
TTGCGACGAGAGGAGTCCGCATCGCGTCATGAAGTGACTCAATGCTCGAC
CACGAGAGTGGCCATCGCCATATATAGCAAATTGTCATCCATACCACTCG
GGGGCAGCGCTCAACAGGCCGCAGCGTGACACAGCATCCTCACATTTGCT
CCGCTATGACGGGCCCTTCTTACCAGGGTTAGGGTTAAGGGCTGACGCTG
CAGTGGTACCACCATGCCCCGACCCTCGCGATTCTGCAATACGTTGCGGT
CTTGGCACTAAACCATTTTTGGCGTGTCGCCGCTGCTGCTGCCGCGCTGC
ACTCTCCGCGCGCGCTGCCGCAGACGAACCGAGCGAGCACAGCCGGCTGC
TGCCCGTGATAGCCACGATCCTGCAGCTCAGCACCTCCGAGCAGCAGGCG
GTGGCCACGTCAATAAAGCGGCGATCCAGCGCGTCTGCCGTGCTGCCGTT
CAGCTGGTTCCCAGCGGGCGGCCCCGGCAAAACCTAGGGTTAGGGTTATG
GGTAGTGGTACTTTAGTAATGGTCGTTGCATCTGTGTTGTGTGCATTGGC
TTTCCCCTCCGTGCTCTCCTGTAGACACAATGATA

Coding sequence (CDS) from alignment at Contig_20:320002..333336+

>mRNA_4078 ID=mRNA_4078|Name=jgi.p|Trimin1|348132|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3723bp|location=Sequence derived from alignment at Contig_20:320002..333336+ (Tribonema minus UTEX_B_3156 )
ATGTTCAAGAACTTTGGAGACGTGTTTTCTGTGCTTGATCTCGACCAGCT
CGCTGACGAGGATGACAAGCAGCAGAAACAGAGCTCCAAGGTACAGCAGC
AGCAGCAGCGGCAACAGCAGCAGCAGCAGCAGCAGCCGCCGCAGCAGCAG
CAGCAACAAAAAAAGCAGCAGCTGTTCGCATCGCCAGCTTCAGCCACCCA
GCCGCAGTCTCTGCTAGGCGACACCCTCACTGGCTTCTGGAGCACGCCAA
CGCGAGCTGCTGCCGCACAGCCGCCGCCGCAGCAGCAGGCGCAGCAGCAG
GAGGTGCAATGGCAGCAGGCAAAGCCCTCCCCTCAGGCGGCGCCGCCGCC
CAGGAAGCGCACCCCTGCTCGCAGGAAGCCGCAGAGCGGCGCTGCTGCGA
CCGAAGATGGCTGGGAGGAGTGGGATGATGGCGCCACGGTGCCCGACAGC
AAGCCAGTTGACATTACTGCTGCTGCTGCTGCTCATGCCCCGCCGCCAGC
TCCAGAGACGCCCAAAGCGACCCCTGCCATGCCTCTGCCATCTCCGCGCC
CGCCAGCAGCAACGCCGCCGCCCGTGGCAGCAGCGGCAGCTGCGGAGCCG
CCTCAGCAAGGCGCAGCGGCAGCCGCCGAGATGAAGGCGAAGCTCGACAC
CGCGCTAGGTACGCTGCGCAGGCTGAAGGGGGTGGTGCTGCAGCGCGAGG
GCGAGCTGGCGGAGGCGGCGCGCGCCGCGGAGCGGTCCGCGCAGGGACGC
GCCGAGCTGCAGGCCGAGTGCGCGCAGCTGCAGCGAGCGCTGTCACAGCA
GCAGCAGCAGCAGCAAAACGCCAATGGTTTCAATTCAGACGAAGTGGCAG
CCGCCGGCTCCTCCGCCTCTGACGGTGTTGCCGGTGGCGGCGGCACGTCG
GCAGCAGCGGCGGCAGCAGCAGATGACAAACCCGCAGGCGCCGATCGGGA
CGAGCCCACTTGCGCTGACGCGGAGCAGCAGCCGCAGGGTACGGAGTGCG
AGGCTCAGTCGTTGGCGGCGCGCTTGGCAGCAGCGGAGGCGCGCAATCAG
GAGCTGGCGGCAGCGCTCAACCAGCAGCAGCAGTGCGATGCATGCAGCGC
GCAGCGGGCGGCGGTGATGGGCGCTGCGCTCGAGGAGGCTGCTGAGAGTG
CGCAGCTTGCAGGCGCGCTGGAGGAAGCGCGACAGGCAGCGGCGCTGGCG
CAGCAGCTCCGCCAGGCCCTGGAGTCGGCAGAGCAGATGCACGAGTACGC
GCTGGCGGCGGCGGCGGAGGCGGCCGCGGCGGATGCGCTCGCGCACGCAG
CCGCGATGGAGGCCGTCGAGGGACGGCTGGCGGCGGCGGATGAAGAGGCG
CGGCAGGCGCGCGCGGCAGCAGCGGGCGCGGCGGAGTGCATGCGGCGGCT
GGAGGGGCAGAGCACCGATGGCATGAAGCTACTTGATGTGGTGGACTGCT
GTAGTGCGTGCTCGGCGGCTGGAAAGGCGGAGCTGGACGAGTCGCAGGAG
CTCAGCGCGCAGCTGCTGCGGGAGCTGGGCAGCGAGCGCACAGCGGCGGA
GGAGGCTCAGCGGACCCTGGAGCAGCAGGTCGCTGCCGCGCTGAGGCGCG
TCGAGGAGAGCGCTGCAGCGGCGGCGGAGGCCGAAACCAGGGCGCGGAGC
GCGGAGGCAGCGGCGGCGGCGCTGGAGGCGCGGTCCTCGGACACCGCAGC
AGCAGCGCTCGCCGACAGGGCGTCGCTCGCGCAGCGCGCGGCGGACGCGC
AGGCGCGGGTGGCAGCGCTCGAGCAGGAGCTGCAGGCGCGGGTGGCAGCG
CTCGAGCGGGAGCTGCAGTTGAGGTCCTGGAGCGTCGCACGGGTCCATTA
CGGATCAGAATGTGTATGTGGGGGGACCGCGATTGTACTGGGGGCGAATG
CGCCGTGCTGGCGGAAAGCACGCGCACGGGTGGCGGCTCTTGGGCGGGAG
CTGCAGGGCGCCACGGACCGCAAGCAGCAGCTCGAGGCGCAGCTCTCGCA
GTACAAGCTGCGCTCGGTGGAGGCGCTGCGGAAGTTCACGGCCCAGGCCG
CGGAACTGTCCGCGGCGAGGAACGCGCTCGAGGACGAGGCGGACGCGCTG
CGCGCCGCCGCGGCGGAGGCGCAGCGGGCGGCGCAGTTCGGTCATCGCGC
GGAGGCGGCAGCAGCCACCAGCAACTTCCACAGCGTCTTTGCGATGATCC
TCCCGGACGCGCTGACGCAAGCGGCGGCGAGTGCTGCTGCTGCGGCGGCG
GCGCAGGAGGACCTGGGGCGCGCCGAGGCGGCGCGCGCGTCCGCTGAGAC
AGCGCTCGCCGACGCCGCCGCTGCGCGCGCCGCAGCTGTCAGCTCCGACA
GGCACGCGCAGGCTGCGCGCGCCGCCGCCGCCAGCTCCGACATGGCGGCA
CAGGCAGCGCTCGCCGATGCCACCGCTGCGCACGCCGCCGCCGCCAGCTC
CGACAGGGACGCGCAGGAGCAGTGCGCGCAGCTGCAGGCGCGGGTGCTGG
AGCTGGAGCGGCAACGCTCAGCGCTGGAGGCGCAGGCGGCGGAGGCGCAG
CGCGCGCTGGCAGCAGCGCAGGCGCGCGAAGCAGCAGCGCTCGCGCAGCG
CCTCGGCAGCCCCGCCCCCGCTTCACCCTCCGCTGCCAACGGCTACTTTT
CGAGCGGCGGCGGCGTCGCGATCGCCACGCCGCCGCCCGCGCGCCGCGTC
TCCTCCTCCAAGCTGCTGGCCTCCGGCAGCGTCACGCCCTCTGCCGACGG
CGGCGCCGCGCTGGGCGGACACGCCCTGAACGGCAGCAGCGGCGGCGGCG
GCGCAGGAGGCGGCGGCGACGCTTTCGGTGCCGGCAATGGCGTCAGGGCC
GATGGGGACGTGGTCAGCAGTGGTTATGGCGCTGCTGGCAGCGGCGGCGG
CGACGGCGGCGGCGGAGGCGGCAAGGGTGCGGGCGGTGGCGATCCCTCTA
TGACGAAGCTGCGCGCCAGCAGCAGTTTCGCCGGCAGCGTGGACGGTGGC
GGCAGCAGCAGCATTGACGGCAGTGAGCACGGCAGGCGCGCCCAGCAGCA
GCAGCAGCAGCAGCGGCAGCAGTTATGGAACGTGCACACGCCGCGCCGCA
GCCTGCCCGGCAGCTTCAGCATTGGCGGCGGCGGCGGCGCGACGCTGGCG
GCAGCGGCAGGCGCAGCGTCCATCGGCGAAGACGGCGGCGACGTGGGCGC
GGCGCTGGCGGCGGTGGCGGCGGAGGCGCGCGCGCTGGCGCGCGAGGGGG
CGGCGCTTGACGCGGAGGCGGCGCACGCGCAGGAGGGCGACGACGCGGCG
CGGCGCGCGCAGCTGTTTCTCGTCGACCAGCTGCAGGAGGCGCGGCGCAG
GGACCAGGCGCGCGCGCAGGCGCTCACGCGAGAACTGGAGGGCGCGCTGC
GTGCGCTGGAGGCGGCACAGGCGACAGAGAGCACCCTCAAGAACAAGCTG
GAGAAGTTTGAGAACGGCGTCAGACGCGAAGAGGTGCTGCACAAGAGCCC
TTCGGCGCACGTGAATCTGGAATACCTCAAGGCAGCCGTGGTGCGGTACA
TGCAGTCAGACGAACCGAGCGAGCACAGCCGGCTGCTGCCCGTGATAGCC
ACGATCCTGCAGCTCAGCACCTCCGAGCAGCAGGCGGTGGCCACGTCAAT
AAAGCGGCGATCCAGCGCGTCTGCCGTGCTGCCGTTCAGCTGGTTCCCAG
CGGGCGGCCCCGGCAAAACCTAG