Homology
BLAST of jgi.p|Trimin1|348132 vs. uniprot
Match:
A0A836CI39_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI39_9STRA)
HSP 1 Score: 1295 bits (3350), Expect = 0.000e+0
Identity = 1240/1240 (100.00%), Postives = 1240/1240 (100.00%), Query Frame = 0
Query: 1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 1240
MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT
Sbjct: 1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 1240
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348132 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M F K N F G D V F S V L D L D Q L A D E D D K Q Q K Q S S K V Q Q Q Q Q R Q Q Q Q Q Q Q Q P P Q Q Q Q Q Q K K Q Q L F A S P A S A T Q P Q S L L G D T L T G F W S T P T R A A A A Q P P P Q Q Q A Q Q Q E V Q W Q Q A K P S P Q A A P P P R K R T P A R R K P Q S G A A A T E D G W E E W D D G A T V P D S K P V D I T A A A A A H A P P P A P E T P K A T P A M P L P S P R P P A A T P P P V A A A A A A E P P Q Q G A A A A A E M K A K L D T A L G T L R R L K G V V L Q R E G E L A E A A R A A E R S A Q G R A E L Q A E C A Q L Q R A L S Q Q Q Q Q Q Q N A N G F N S D E V A A A G S S A S D G V A G G G G T S A A A A A A A D D K P A G A D R D E P T C A D A E Q Q P Q G T E C E A Q S L A A R L A A A E A R N Q E L A A A L N Q Q Q Q C D A C S A Q R A A V M G A A L E E A A E S A Q L A G A L E E A R Q A A A L A Q Q L R Q A L E S A E Q M H E Y A L A A A A E A A A A D A L A H A A A M E A V E G R L A A A D E E A R Q A R A A A A G A A E C M R R L E G Q S T D G M K L L D V V D C C S A C S A A G K A E L D E S Q E L S A Q L L R E L G S E R T A A E E A Q R T L E Q Q V A A A L R R V E E S A A A A A E A E T R A R S A E A A A A A L E A R S S D T A A A A L A D R A S L A Q R A A D A Q A R V A A L E Q E L Q A R V A A L E R E L Q L R S W S V A R V H Y G S E C V C G G T A I V L G A N A P C W R K A R A R V A A L G R E L Q G A T D R K Q Q L E A Q L S Q Y K L R S V E A L R K F T A Q A A E L S A A R N A L E D E A D A L R A A A A E A Q R A A Q F G H R A E A A A A T S N F H S V F A M I L P D A L T Q A A A S A A A A A A A Q E D L G R A E A A R A S A E T A L A D A A A A R A A A V S S D R H A Q A A R A A A A S S D M A A Q A A L A D A T A A H A A A A S S D R D A Q E Q C A Q L Q A R V L E L E R Q R S A L E A Q A A E A Q R A L A A A Q A R E A A A L A Q R L G S P A P A S P S A A N G Y F S S G G G V A I A T P P P A R R V S S S K L L A S G S V T P S A D G G A A L G G H A L N G S S G G G G A G G G G D A F G A G N G V R A D G D V V S S G Y G A A G S G G G D G G G G G G K G A G G G D P S M T K L R A S S S F A G S V D G G G S S S I D G S E H G R R A Q Q Q Q Q Q Q R Q Q L W N V H T P R R S L P G S F S I G G G G G A T L A A A A G A A S I G E D G G D V G A A L A A V A A E A R A L A R E G A A L D A E A A H A Q E G D D A A R R A Q L F L V D Q L Q E A R R R D Q A R A Q A L T R E L E G A L R A L E A A Q A T E S T L K N K L E K F E N G V R R E E V L H K S P S A H V N L E Y L K A A V V R Y M Q S D E P S E H S R L L P V I A T I L Q L S T S E Q Q A V A T S I K R R S S A S A V L P F S W F P A G G P G K T * 100 200 300 400 500 600 700 800 900 1000 1100 1200 Expect = 0.00e+0 / Id = 100.00 Sequence A0A836CI39_9STRA
Match Name E-value Identity Description
A0A836CI39_9STRA 0.000e+0 100.00 GRIP domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M F K N F G D V F S V L D L D Q L A D E D D K Q Q K Q S S K V Q Q Q Q Q R Q Q Q Q Q Q Q Q P P Q Q Q Q Q Q K K Q Q L F A S P A S A T Q P Q S L L G D T L T G F W S T P T R A A A A Q P P P Q Q Q A Q Q Q E V Q W Q Q A K P S P Q A A P P P R K R T P A R R K P Q S G A A A T E D G W E E W D D G A T V P D S K P V D I T A A A A A H A P P P A P E T P K A T P A M P L P S P R P P A A T P P P V A A A A A A E P P Q Q G A A A A A E M K A K L D T A L G T L R R L K G V V L Q R E G E L A E A A R A A E R S A Q G R A E L Q A E C A Q L Q R A L S Q Q Q Q Q Q Q N A N G F N S D E V A A A G S S A S D G V A G G G G T S A A A A A A A D D K P A G A D R D E P T C A D A E Q Q P Q G T E C E A Q S L A A R L A A A E A R N Q E L A A A L N Q Q Q Q C D A C S A Q R A A V M G A A L E E A A E S A Q L A G A L E E A R Q A A A L A Q Q L R Q A L E S A E Q M H E Y A L A A A A E A A A A D A L A H A A A M E A V E G R L A A A D E E A R Q A R A A A A G A A E C M R R L E G Q S T D G M K L L D V V D C C S A C S A A G K A E L D E S Q E L S A Q L L R E L G S E R T A A E E A Q R T L E Q Q V A A A L R R V E E S A A A A A E A E T R A R S A E A A A A A L E A R S S D T A A A A L A D R A S L A Q R A A D A Q A R V A A L E Q E L Q A R V A A L E R E L Q L R S W S V A R V H Y G S E C V C G G T A I V L G A N A P C W R K A R A R V A A L G R E L Q G A T D R K Q Q L E A Q L S Q Y K L R S V E A L R K F T A Q A A E L S A A R N A L E D E A D A L R A A A A E A Q R A A Q F G H R A E A A A A T S N F H S V F A M I L P D A L T Q A A A S A A A A A A A Q E D L G R A E A A R A S A E T A L A D A A A A R A A A V S S D R H A Q A A R A A A A S S D M A A Q A A L A D A T A A H A A A A S S D R D A Q E Q C A Q L Q A R V L E L E R Q R S A L E A Q A A E A Q R A L A A A Q A R E A A A L A Q R L G S P A P A S P S A A N G Y F S S G G G V A I A T P P P A R R V S S S K L L A S G S V T P S A D G G A A L G G H A L N G S S G G G G A G G G G D A F G A G N G V R A D G D V V S S G Y G A A G S G G G D G G G G G G K G A G G G D P S M T K L R A S S S F A G S V D G G G S S S I D G S E H G R R A Q Q Q Q Q Q Q R Q Q L W N V H T P R R S L P G S F S I G G G G G A T L A A A A G A A S I G E D G G D V G A A L A A V A A E A R A L A R E G A A L D A E A A H A Q E G D D A A R R A Q L F L V D Q L Q E A R R R D Q A R A Q A L T R E L E G A L R A L E A A Q A T E S T L K N K L E K F E N G V R R E E V L H K S P S A H V N L E Y L K A A V V R Y M Q S D E P S E H S R L L P V I A T I L Q L S T S E Q Q A V A T S I K R R S S A S A V L P F S W F P A G G P G K T * 100 200 300 400 500 600 700 800 900 1000 1100 1200 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Expect = 2.9E-6 / Score = 29.1 Score = Score = Score = Score = Score = Score = Score = Score = Expect = 1.7E-8 / Score = 44.2 Expect = 3.2E-14 / Score = 52.5 Score = 12.320366 Sequence Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil G3DSA:1.10.220.60 mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite PTHR23157 SM00755 PF01465 PS50913
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 436..456 None No IPR available COILS Coil Coil coord: 506..561 None No IPR available COILS Coil Coil coord: 23..43 None No IPR available COILS Coil Coil coord: 573..604 None No IPR available COILS Coil Coil coord: 748..768 None No IPR available COILS Coil Coil coord: 243..270 None No IPR available COILS Coil Coil coord: 386..413 None No IPR available COILS Coil Coil coord: 1108..1156 None No IPR available COILS Coil Coil coord: 644..710 None No IPR available COILS Coil Coil coord: 335..362 None No IPR available COILS Coil Coil coord: 818..866 None No IPR available GENE3D 1.10.220.60 GRIP domain coord: 1168..1225 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 985..1034 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 268..285 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 164..196 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 14..205 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 268..335 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 28..109 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 970..1041 None No IPR available PANTHER PTHR23157 GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 coord: 512..1231 IPR000237 GRIP domain SMART SM00755 1grip coord: 1169..1216 IPR000237 GRIP domain PFAM PF01465 GRIP coord: 1171..1213 IPR000237 GRIP domain PROSITE PS50913 GRIP coord: 1166..1216
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>Trimin1|348132|estExt_Genemark1.C_Ctg_200040 ID=Trimin1|348132|estExt_Genemark1.C_Ctg_200040|Name=jgi.p|Trimin1|348132|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1241bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR000237 GRIP_dom