mRNA_11821 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A835ZEZ7_9STRA (Ubiquitin-related domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A835ZEZ7_9STRA) HSP 1 Score: 770 bits (1989), Expect = 5.520e-280 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHPGRGALGHDRQREAEDPGQGGHPPRPAAPDLCRQAAGGRPHPERLQHPEGVHAPPGAASARRAVRSGCAG 1266
MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHPGRGALGHDRQREAEDPGQGGHPPRPAAPDLCRQAAGGRPHPERLQHPEGVHAPPGAASARRAVRSGCAG
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHPGRGALGHDRQREAEDPGQGGHPPRPAAPDLCRQAAGGRPHPERLQHPEGVHAPPGAASARRAVRSGCAG 388
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A446XTY9_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446XTY9_TRITD) HSP 1 Score: 504 bits (1299), Expect = 5.120e-176 Identity = 267/324 (82.41%), Postives = 284/324 (87.65%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHPGRGAL 1074
MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL+LRGGMQIFVKTLTGKTITL+VE SDTID +A+ + G P R ++ ++ P RLQH EGV+ GA WWHAD +DTDRQDHHPG L
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLKLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP-RTSSVSSSLASSSRMAAPWRLQHSEGVHPPPGAQAPWWHADFCQDTDRQDHHPGGRVL 323
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A2V2UHT5_TRYCR (Putative polyubiquitin n=11 Tax=Eukaryota TaxID=2759 RepID=A0A2V2UHT5_TRYCR) HSP 1 Score: 511 bits (1317), Expect = 1.750e-175 Identity = 266/316 (84.18%), Postives = 281/316 (88.92%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQD 1050
MQIFVKTLTGKTI L+VE SDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTI+NVK KIQDKEGIPPDQQRLI +DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTI+KRE EDP QGGH PAAPD RWQAAGGRPH +RLQHPEGV+++ AAPA HADLREDTD QD
Sbjct: 1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLILLASSWRTAARSADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIEKREGEDPGQGGHSAGPAAPDLRWQAAGGRPHARRLQHPEGVHAAPCAAPARRHADLREDTDGQD 316
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A836KAF1_9TRYP (Uncharacterized protein n=1 Tax=Leishmania orientalis TaxID=2249476 RepID=A0A836KAF1_9TRYP) HSP 1 Score: 531 bits (1369), Expect = 2.790e-173 Identity = 288/380 (75.79%), Postives = 310/380 (81.58%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHPGRGALGHDRQREAEDPGQGGHPPRPAAPDLCRQAAGGRPHPERLQHPEGVHAPPGAASARR 1242
MQIFVKTLTGKTI L+VE SDTI+NVK KIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLV RLRGGMQIFVKTLTGKTI L+VE SDTI+NVK KIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTI+NVK KIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLV + + +RE +DP QGGHP PAAPD R QAAGG PH + LQHPEGV+++ GAAPA HADLRED RQD G G H R+RE +DPGQGGHP PAAPDL RQAAGG PH LQHPEGVHA PGAA ARR
Sbjct: 457 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVPRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVPAPARRHADLREDAHRQDDRAGGGGERHHREREGQDPGQGGHPAGPAAPDLRRQAAGGGPHARGLQHPEGVHAAPGAAPARRHADLREDAHRQDDRAGGGGERHHREREGQDPGQGGHPAGPAAPDLRRQAAGGGPHARGLQHPEGVHAAPGAAPARR 836
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A8B9TTH6_ANAPL (Ubiquitin B n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=A0A8B9TTH6_ANAPL) HSP 1 Score: 502 bits (1293), Expect = 8.410e-171 Identity = 266/319 (83.39%), Postives = 280/319 (87.77%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHP 1059
MQIFVKTLTGKTITL+VEPSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ +A+ + G PP F + PEG++ GAAP WHAD RED D QDHHP
Sbjct: 290 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPEGIHPPPGAAPERWHADFREDLDWQDHHP 608
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: M5BSU7_THACB (Polyubiquitin n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5BSU7_THACB) HSP 1 Score: 494 bits (1273), Expect = 1.140e-170 Identity = 259/283 (91.52%), Postives = 265/283 (93.64%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPH 951
MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID + EDPRQGG+P RP D R QAAG R H
Sbjct: 129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNCQGEDPRQGGYPTRPTTIDLRRQAAGRRSH 411
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: F0YAA4_AURAN (Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 RepID=F0YAA4_AURAN) HSP 1 Score: 490 bits (1261), Expect = 1.580e-170 Identity = 255/266 (95.86%), Postives = 258/266 (96.99%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPP 900
MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID + + + G PP
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPP 266
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A836CJQ4_9STRA (Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ4_9STRA) HSP 1 Score: 491 bits (1264), Expect = 1.640e-170 Identity = 256/270 (94.81%), Postives = 260/270 (96.30%), Query Frame = 1
Query: 91 LSVIMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPP 900
+ V MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID + + + G PP
Sbjct: 27 MQVNMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPP 296
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: A0A7I8JF00_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JF00_SPIIN) HSP 1 Score: 484 bits (1247), Expect = 5.700e-167 Identity = 263/321 (81.93%), Postives = 275/321 (85.67%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRW-QAAGGRPHPQRLQHPEGVYSSLGAAPAWWHADLREDTDRQDHHPG 1062
MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID +A+ + G PP F Q GR E +P WW ADLRED+ RQDHHPG
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHPCPPSP-WWDADLREDSHRQDHHPG 396
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Match: H3G9R0_PHYRM (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=H3G9R0_PHYRM) HSP 1 Score: 484 bits (1245), Expect = 6.510e-167 Identity = 251/266 (94.36%), Postives = 258/266 (96.99%), Query Frame = 1
Query: 103 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPP 900
MQIFVKTLTGKTITLDVEPSD+IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID + + + G PP
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPP 266 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|4039 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11821 ID=mRNA_11821|Name=jgi.p|Trimin1|4039|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1387bp|location=Sequence derived from alignment at Contig_102:255911..258851- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCGCAATCACTCTCTCTCTGCGACAGCGGCGAGGACACACACACGCGACAback to top protein sequence of jgi.p|Trimin1|4039 >Trimin1|4039|CE4038_3007 ID=Trimin1|4039|CE4038_3007|Name=jgi.p|Trimin1|4039|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=389bp MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLback to top mRNA from alignment at Contig_102:255911..258851- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11821 ID=mRNA_11821|Name=jgi.p|Trimin1|4039|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2941bp|location=Sequence derived from alignment at Contig_102:255911..258851- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_102:255911..258851- >mRNA_11821 ID=mRNA_11821|Name=jgi.p|Trimin1|4039|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1167bp|location=Sequence derived from alignment at Contig_102:255911..258851- (Tribonema minus UTEX_B_3156 )back to top |