mRNA_16424 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353930
Unique Name	mRNA_16424
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353930 vs. uniprot
Match: A0A836CIL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL2_9STRA)

HSP 1 Score: 387 bits (995), Expect = 6.600e-133
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1

Query:  391 MVQKFLLNEETGLPTDDAFCVAVDISSVITPTSYFFFQASFDPLNPDETSPVWFNIFLTSYMPGPDVPAGRGYYVSEGRFFTAYDSQITVQQLYSFRPEYNNLTTYSMSSNFNGESGGLNLVSFNFRASGLGADVLEEQDPLDVVTLLGSLFGYVPTILAGFAALFSVFIKRNLRQAEEQKITRLIEVHKGGLQA 975
            MVQKFLLNEETGLPTDDAFCVAVDISSVITPTSYFFFQASFDPLNPDETSPVWFNIFLTSYMPGPDVPAGRGYYVSEGRFFTAYDSQITVQQLYSFRPEYNNLTTYSMSSNFNGESGGLNLVSFNFRASGLGADVLEEQDPLDVVTLLGSLFGYVPTILAGFAALFSVFIKRNLRQAEEQKITRLIEVHKGGLQA
Sbjct:    1 MVQKFLLNEETGLPTDDAFCVAVDISSVITPTSYFFFQASFDPLNPDETSPVWFNIFLTSYMPGPDVPAGRGYYVSEGRFFTAYDSQITVQQLYSFRPEYNNLTTYSMSSNFNGESGGLNLVSFNFRASGLGADVLEEQDPLDVVTLLGSLFGYVPTILAGFAALFSVFIKRNLRQAEEQKITRLIEVHKGGLQA 195

[Close]

BLAST of jgi.p|Trimin1|353930 vs. uniprot
Match: A0A836CLH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 9.150e-44
Identity = 100/201 (49.75%), Postives = 132/201 (65.67%), Query Frame = 1

Query:  394 VQKFLLNEE-----TGLPTDDAFCVAVD---ISSVITPTSYFFFQASF--------DP-------LNPDETSPVWFNIFLTSYMPGPDVPAGRGYYVSEGRFFTAYDSQITVQQLYSFRPEYNNLTTYSMSSNFNGESGGLNLVSFNFRASGLGADVLEEQDPLDVVTLLGSLFGYVPTILAGFAALFSVFIKRNLRQAEE 927
            V+K  L+E+     + L    A CV V+    S  I+PT+ F  QA+F        DP       L PD  +P+WFN+ LTS +P    P+G  YY++EGRF T+YD+QIT Q  +SFRP ++  T+YSM++N++G+SG +N V+FNFRASGLG DVL EQDPLD+VTLLGSL GY P +L  F  LF+ +I RNLRQAEE
Sbjct:  109 VEKRHLSEDPAAQYSALQVGAAHCVIVEPRGSSMRISPTNCFQLQATFRRVDPHLDDPGLGVHALLQPD--TPIWFNVLLTSSVPDETSPSG--YYINEGRFGTSYDAQITKQIRHSFRPAHDGKTSYSMATNYDGDSGLVNKVTFNFRASGLGVDVLVEQDPLDLVTLLGSLAGYFPNVLTLFGLLFAPYIARNLRQAEE 305

[Close]

BLAST of jgi.p|Trimin1|353930 vs. uniprot
Match: A0A836CKZ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.980e-15
Identity = 46/64 (71.88%), Postives = 50/64 (78.12%), Query Frame = 3

Query:  135 QRVLRRTFAGGLVELTLSGMDGGVSWGLQGSGGVIDYLLVLNNDAALELIQSRDQ-CMAQCMAA 323
            Q+  RR  A  +VEL L G+DGGVSWGLQGSGGV DYLLVLNNDAALEL QSRDQ C+A C  A
Sbjct:  108 QQAARRA-APSVVELALGGVDGGVSWGLQGSGGVTDYLLVLNNDAALELFQSRDQLCVAHCRTA 170

[Close]

BLAST of jgi.p|Trimin1|353930 vs. uniprot
Match: A0A835YKQ4_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.810e-7
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 3

Query:  198 GGVSWGLQGSGGVIDYLLVLNNDAALELIQSRDQ 299
            GGVSWGLQG GGV DYLLVL+NDAALEL QSRDQ
Sbjct:  503 GGVSWGLQGGGGVTDYLLVLHNDAALELFQSRDQ 536

[Close]

BLAST of jgi.p|Trimin1|353930 vs. uniprot
Match: A0A835ZGD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.530e-6
Identity = 34/58 (58.62%), Postives = 36/58 (62.07%), Query Frame = 3

Query:  189 GMDGGVSWGLQGSGGVIDYLLVLNNDAALELIQSRDQCMAQCMAAYSCNKAPLVVRGG 362
            G   G   GLQGSGGV DYLLVL+NDAALEL QSRDQ  A   A  S  +  L V  G
Sbjct:  652 GYGWGSQLGLQGSGGVTDYLLVLHNDAALELFQSRDQVSAAAAAVSSAQQEALAVARG 709

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353930 vs. uniprot

BLAST of jgi.p|Trimin1|353930 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A836CIL2_9STRA	6.600e-133	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CLH2_9STRA	9.150e-44	49.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CKZ4_9STRA	1.980e-15	71.88	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YKQ4_9STRA	5.810e-7	88.24	FYVE-type domain-containing protein n=1 Tax=Tribon...	[more]
A0A835ZGD0_9STRA	2.530e-6	58.62	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_197	contig	Contig_197:55392..63609 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353930\|estExt_Genemark1.C_Ctg_1970010
Hectar predicted targeting category	other localisation
TranscriptId	354252
Track	FilteredModels1
ProteinId	353930

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353930	gene_16424	Tribonema minus UTEX_B_3156	gene	Contig_197 55392..63609 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353930	Trimin1\|353930\|estExt_Genemark1.C_Ctg_1970010	Tribonema minus UTEX_B_3156	polypeptide	Contig_197 55597..61157 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16424_6	exon_16424_6	Tribonema minus UTEX_B_3156	exon	Contig_197 55392..55923 -
exon_16424_5	exon_16424_5	Tribonema minus UTEX_B_3156	exon	Contig_197 57977..58228 -
exon_16424_4	exon_16424_4	Tribonema minus UTEX_B_3156	exon	Contig_197 61149..61248 -
exon_16424_3	exon_16424_3	Tribonema minus UTEX_B_3156	exon	Contig_197 62076..62237 -
exon_16424_2	exon_16424_2	Tribonema minus UTEX_B_3156	exon	Contig_197 62674..62754 -
exon_16424_1	exon_16424_1	Tribonema minus UTEX_B_3156	exon	Contig_197 63554..63609 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16424	UTR3_16424	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_197 55392..55596 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16424	CDS_16424	Tribonema minus UTEX_B_3156	CDS	Contig_197 61149..61157 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_16424	UTR5_16424	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_197 63554..63609 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_197:55392..63609-
coding sequence from alignment at Contig_197:55392..63609-

spliced messenger RNA

>mRNA_16424 ID=mRNA_16424|Name=jgi.p|Trimin1|353930|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1183bp|location=Sequence derived from alignment at Contig_197:55392..63609- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCGCACTGGTGGAAGGCGCGCACGTCACTGGCGTTCACCCCAGGTGGGG
CATGAGGTGCGCCGCTCCGCGCGCGCGCTTGTTTCCTCCGCCGGTGCGCA
CAGCGTTGGGCATCGTGTGCGGCGCGGCAATCGGCAGCGGGTGTTGCGTC
GCACGTTTGCTGGAGGGCTCGTGGAGCTCACCCTCAGCGGTATGGATGGG
GGGGTCAGCTGGGGGCTGCAGGGCAGCGGCGGCGTCATTGACTACCTGCT
TGTGCTGAACAACGACGCGGCGCTGGAGCTGATCCAGTCGCGCGATCAGT
GCATGGCGCAGTGCATGGCAGCATACAGCTGCAATAAGGCGCCGCTGGTG
GTGAGAGGAGGGTAGCCTGGCTCTGCACGAAGGCGGCACCATGGTGCAGA
AGTTCCTGCTGAACGAGGAGACAGGACTGCCAACGGACGATGCTTTCTGC
GTTGCCGTAGACATTAGCTCTGTGATCACGCCCACAAGTTACTTCTTCTT
TCAGGCCAGCTTTGACCCGCTCAACCCAGATGAGACATCACCAGTGTGGT
TCAACATCTTTCTGACATCGTACATGCCAGGACCGGACGTGCCGGCCGGC
CGCGGATACTACGTCAGCGAGGGCCGATTCTTCACCGCTTACGATTCGCA
GATCACCGTGCAGCAGCTGTACTCCTTCCGCCCAGAGTACAACAACCTGA
CCACCTACTCCATGTCGAGCAACTTCAATGGTGAGAGCGGGGGGTTGAAC
TTGGTGTCCTTCAACTTCAGGGCCAGCGGGTTGGGGGCGGACGTACTGGA
GGAACAAGATCCGCTTGACGTTGTCACCTTGCTGGGTTCTTTGTTCGGGT
ACGTTCCGACTATTTTAGCAGGGTTTGCCGCGCTCTTCAGCGTCTTCATC
AAGCGTAACTTGAGGCAGGCAGAGGAACAAAAGATCACCAGGCTGATCGA
AGTTCACAAGGGGGGTCTTCAGGCGTAGAGCAGCTCGTGAGCCCAATTTG
AAGCACCACTGCCGCGCGAAAATGAAACTGTTTCAGCGACGTACGTGCTG
CCGTGTACTGATGGATAGCTACCGTGACGGCAGAAAGGGTGGTGATCGAG
GCTGGCAAAGCGAAGTTGTCGTATCAGATCCGATTGCGTCAAGTTTGGGG
ATTGGTGGTAATATTATGCGAGTTTGCGACTGC

protein sequence of jgi.p|Trimin1|353930

>Trimin1|353930|estExt_Genemark1.C_Ctg_1970010 ID=Trimin1|353930|estExt_Genemark1.C_Ctg_1970010|Name=jgi.p|Trimin1|353930|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=196bp
MVQKFLLNEETGLPTDDAFCVAVDISSVITPTSYFFFQASFDPLNPDETS
PVWFNIFLTSYMPGPDVPAGRGYYVSEGRFFTAYDSQITVQQLYSFRPEY
NNLTTYSMSSNFNGESGGLNLVSFNFRASGLGADVLEEQDPLDVVTLLGS
LFGYVPTILAGFAALFSVFIKRNLRQAEEQKITRLIEVHKGGLQA*

mRNA from alignment at Contig_197:55392..63609-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16424 ID=mRNA_16424|Name=jgi.p|Trimin1|353930|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8218bp|location=Sequence derived from alignment at Contig_197:55392..63609- (Tribonema minus UTEX_B_3156 )
CGCGCACTGGTGGAAGGCGCGCACGTCACTGGCGTTCACCCCAGGTGGGG
CATGAGGTGCGCGCGCTTGCGAACAACGCACGCTCCACGCTTCTCTCCTC
ACGGGTGACGGGTGCTGCTGGGCGGCTGCAGGGTGCCGCGCCGCCCCGCA
TTGCTTCGATGAGGGCGGAGATACAAGTTGCTCGTACCAGCGGGCGCATG
CGCTGCGACTGACCGCGCTTGGTCCCACTTCCTGATCTCATACTCATATC
GGTCTGCGCGCACGGGTTGTACCGCTCTGCGAAGCAGTTCTCGTCAGCTG
CTGATGACCCCTGTCACTCGAGCTCGCTGTGGTGCGTTTCCGTGGTGGCA
CGTACGCACTCACGGCGCTGTCAACCAGATCTCAAAAGGCGTCGTCAGCT
GCTTATGACCCCTCTCGCTCGAGCTCGCCATGGCGCGTTGAGAGAGTGGC
TCCGCGCTGGCACGTACGCGTTCACGGCGCTGTCAACCAGATTTCAAATG
GCAGTGGTCGGTTAGCACAAATGATGCATGTTCACTCTGCATCTGCGCAC
GCTGGCGGGGACGCTGCGCCGCTGGTGTCGGCGGGCCCCCGCCGTGTTGC
TCCCTGCACACAACCTTAAAGTACCCCCCCACCATCTCTGCCACTTCGTT
GTCCAAGAGCGCACATGCCATGACGCCAATGTCAGACCCCAGCCGCTGCC
TTCATGCAGTCAGGCATGTGTACGCGGCGCCGCCACCTTGCTCCTGGCCA
GCGGTCTGCGGCAACTTCATAGCACACTTCAAGATCCCAGCCACTGCCCT
CACCACTAATTGCTGACGGCATGCGCGCGCTGCGCCGCCGCCGTTGCTGT
CGCAGGTGCGCCGCTCCGCGCGCGCGCTTGTTTCCTCCGCCGGTGCGCAC
AGCGTTGGGCATCGTGTGCGGCGCGGCAATCGGCAGGCAAGCAATATGTG
TTGTGTGGAGTGTGTGCATGCTGCCAGCGGCTGCACGCACCGCGCATGCG
TAGTGCTGCGCAACGCGGGCGCCACTAACGCTGTATGTGCACTGACCGCG
AGTGCCGCGCGCGCAGATCGTCTTCGCTTGTGCCTCGAACTGGTGTCAGC
TGCCCCCCAGCGCCACCACAAATGGTGCCCGCACCCTCCACATGAACATT
AATCCGACCACCTCAGTGCTCTCCGTGATGTGCTGCATGCGCATGCATCG
CTGCCACAATCCCCCCTCCCCCCCCGTGTGCGAAGCAAATTGCGCTGCGC
GGCTCTTGCCGCTCGACCGCCACCACACCGCGCCATGCGTCGCATGGCTG
CGCGCGTTGCTGTCACAATCAAACTAACCCAACGCTCGGCTCATGCACGC
CGTCCGTTTGCCGTTGCCGCAGCGGGTGTTGCGTCGCACGTTTGCTGGAG
GGCTCGTGGAGCTCACCCTCAGCGGTATGGATGGGGGGGTCAGCTGGGGG
CTGCAGGGCAGCGGCGGCGTCATTGACTACCTGCTTGTGCTGAACAACGA
CGCGGCGCTGGAGCTGATCCAGTCGCGCGATCAGGTGAGCATCGCTGCCG
CCGCCGCCAGCAGTGCTCAGCAAGAGGCAGGTGCGCGCGGGCCCACTACC
CTCCACGCATAGCCTGCCGCCGCTTACAGCGTGTTCGCAGTGCCCAGCAA
TAGAACATTGCTCTAGATGATATCCAAGAACGCGACGACTGCGCATCGCT
CGTTGCTTGAGCATACTTCCAAGTGCGCGCATTGCATACCAAAGACAGCT
TCAGCGACTTTGACACACAAATTGCTATTGGAGAGCTTTCAAGTTCAATC
ACGATCACGTGATCAACGCTGTGAAACCTCTCCCACTGGATGCTGCGCGC
AGCATTCATAAATTGCAGGTTGCAAGGCAAAAACACAAGTAGTTTAGGGA
TGGCACCAAACTGTGGAAGGAGTGCGTGAGGGCCTACTCACCAATAGCTC
TCAGAGACTATGTTGTCTTCTGTTATTGTGATCTCCAACTCCATTTCTGT
AGATCACGGTTCATCTTCGTCTTGATAGAGCACAACAGCATTGTTTTCTG
TCAGAGTTGCTTGCGACTCGCAGTGGCGTAGCAGAAAAATGCTGATTATA
AACATCAAATGTATGTGACTGGAGTACTGCAGCCGTGATCTTGATGTCAC
TGCTGCGTCCAGGACACACATACAGAGCAGATCATCACACTTCATAGATT
CTCATGCTTTGAGCACTGCTGCAGCAACAGCGATACATGTACTACGCTCA
AGGTGCTCAATGACATGGTGTCTGCTTTGTCGTGAGCGTCGCCATCACCA
GCCGTTGATGCAATATGTAATCAGGGACCGCATCCATTGCTGTTCCCTCT
CGTATGTTCAGTGCATGGCGCAGTGCATGGCAGCATACAGCTGCAATAAG
GCGCCGCTGGTGGTGAGAGGAGGGTAGCCTGGCTCTGCACGAAGGCGGCA
CCATGGTGCAGGTGCGCACCTTCATCGAAGTAGTCTACACTTGTGCGTAG
TGGCGAGTCCTATGGCAAAAATGTTTCGTTGAAACTTCACAGGTGATGCT
TTACAACACCATTGCCTCAGCGTGATAGCACTTTTATAAATTGGACTTCA
TATATGATGCCCACATCAAAATGAGTTTTAGTCACGTTCAGTTTTGTGGT
ATGCTGTGTCAAGTGCATGGAGCTTTGATTGCAAATTCACTCTGTAAACT
CATTGACTTCAAAGCCTTGGCATCGCTACTGTACCTGTGGGGTTGCAAGC
GCGTGTGAAGTGGTTGCACAAAAGTGGGGCATTGCTTCGAAGCTACTGTG
CGTATAGGTGAATGCTGGGCCATGCGTCCACTCAACAAGGTGTGCAGAAA
CTTTCTGCTGAAAAACGGCACGAATCCGATGAGTCATATACCAAATCTGT
GCAAAACATGTACGTATCAGTGAATTCACATCATCTCATGGCCGCCGCTT
GCATGTATTGAGATTGCGTGCGGGTACAGCAGCCGTATTGACAGAAGGTT
GCCATTTGTGTACGCTTCTTCTCAAAGGATGTTGATGCGCTAAAAGATGT
TACTACACGATGTTAGCAATGCAGTTGGAAACCACAACCTGATGCAACAG
CACACGTCATTGAGTTTATTGTTTCAGATACTTCAGAAGTATCATTTTAT
GTGTGTGTTTCCCTCATCCTGACATTGTAAATTGCTTCTGACAGGTTAAA
ATTGGTCTGGTCTACTGCCTGGACCGGCTCATCCCGAGGCGCTTGGGACT
ATGGAGAAATCCTGTTTGAGCCGGTGGAAGCTGCAATGGGTGGTGGTATA
TGCAGCCAGTAATCCAAGGGATGCAGTACTGCACGCGCACTCAGTTGTCA
GTGGGTGTAGCGGGGCCAGGGATAGCACTTCGGCAGTATACCATGAGGTT
TTGCTGATGACCTTTTTCGACGTGTACATGAGCTGTGAGGCTCTGGCAAG
GGTGGCCAGGGTGGTTTGGTTGGCTGCAATTTTGGTATACATGAACACTG
GGCACCATGAAGTCAAATCATCTCTCAGTAACTGAGGAGTTTTCTGGATC
CATGCTGCTTTGCCGATGGCATGTGCATGTTGTTGTGTGTACATTGCATG
AGTTTGATGAGCTGCAATGCTGGTGATGTCAATTGTATGCTGTGTCATCA
GTAGGGCAGAATGAGGGCACCGAACCACAGCCGAATCGCATTCTGTGCAC
CGAAACAGGCCAGAACGTTCATTCTGTGCAGATTCGGGCGCCGAAACAGC
CCCGGACGGAACGAGCGATTCGGTGACATGAACGTAATTGCCACCGAATG
GGCACAGAATGGCGAATGCTTCGGGGCACCGAATAAGTGCCGAAACGGAG
CCTAAAGTGGCCAGAATGGACATACCGTTTTCCTGATGGCCAACACCACA
CTACACCATCGCGGTTTCGGAAACACTTCGGGGTCAATTCGTTGATCGGA
TGAGTGTTGACACATGAAGTTTAGTTAAAACTGTAGGACTAGCTGAAATG
CCCGCGCTACGGATGGTGAGCAGAATTGCTTGTAGTACGGATGCACGCGA
GAAATGCGCCATGGAAAAAAAATCGAGGGAGATGTACGATTGATGCAGTG
TGTGAGCAATCACAGCAATCACAGCTCTGGCACTAGAAAAAATGGTGGCT
CTGAGCAATTACTCCAAATATGCCTGGAATAGCGACACAGCGTGCCAGCT
AGTCTTGCTGTTGCTGCCGTAACAACACAGACACTGCGAACTGGACCGTG
TCACATAAACTCTCATACATGGGGGCACGGCTCTGGAGGGCCACCGTGCT
GCTGCTGTTGTTGCTGAACGCCGCGCTGTCAAGCAGGCACAGCGAAGCAA
ACTCCTGCAGTCATGCCTGCTGCTGCTGCTGCTGCCGCTGCGGGGCCAGG
AACAGGGCGACTCTCCTACATTTACTACACCAAGAATTGTGTGTCTGTCT
CTCACTGTTTCGCTGCTACAATTGCTGTGTGCCAGCGTATTACACCGCTC
GACCCGCCTCTGCTTCGCTTGGCCCCGCGTCTGCTTCGCTTGGCACTGCT
GCTTTCGGCGGGTGCTGGCATAATTTTGCCGGATTGGTAATTTTGCCGTG
GAGTGGACTCGACGGGGTAGTTGGGATTTCAATTGGCGTTATCAACGTGA
GGGGGGGCGCGGCTGTCTGTAGGGAGGCTGAGGACGCCTGCAGGTGACCT
AGTATGTAGTCGCGTCCACTTGATGTTATCGCGAGGTGGATCTTGCCTCC
ACCTTCTGTGCAACATGCTGACAGATTGCTTTACTAACTTACTTAGTAGT
AACTCCACCTTCAGAATTTCTGAATCTGTGCAACATGCTGCAAGCTATTG
TGATGGCTGATGACGTATACTGTATCGGCATTAATGCCCACACATCACTC
TTTACTCGCGATGCAGGGCAGCCGCTCCAAGGTTTCAATTTTGAGGCTCA
TGGCATCCAGTGCACAGCACAGTGTCACTAAGGGAAGTGCGCCACGGGAG
CAGTCCGAGATCCCACCCATGATTGAGCCAGCGGCACCTAATAGTATGTC
CGAGGACAGGGACACAGGGCCTGGTTTGGCAGACGCCTTGACGCAGAGTT
GGCCGGCGAACAAAGTCATTGCACAGTGGAGGTGTGCGGCACACCTAGTG
CTCGTGCTGCTGATCCTTGGTTTTCTGGGTTTTGCAGCGTGGGCGTTCTG
GGCAGCGTACGAAAAGCGGTCTCAGCCCCCAGTGTCCTTTTTCCGTAATG
TCACGGCTACGTCTTTCGTGATGCCGTATGTCACTTTGTGCCTTCAAACC
AGGCATGTGAGGAACCCCACAGGCACCATCACCTGGACAGTTGACTGTGA
GTTGTCCGAGCCCCCTAGCTGTGTCGTTCAGAAGTTCCTGCTGAACGAGG
AGACAGGACTGCCAACGGACGATGCTTTCTGCGTTGCCGTAGACATTAGC
TCTGTGATCACGCCCACAAGTTACTTCTTCTTTCAGGCCAGCTTTGACCC
GCTCAACCCAGATGAGACATCACCAGTGTGGTTCAACATCTTTCTGACAT
CGTACATGCCAGGACCGGACGTGCCGGCCGGCCGCGGATACTACGTCAGC
GAGGGCCGATTCTTCACCGCTTACGATTCGCAGGTGAGCAGTTTAAACGT
TGTTGTTCAACTTTGCGGTTGTTGAGCAATCATAAGCACCACTACTTCTT
AGTCTTTGCAACTACGTACCCTTCCAGTTGTCATGTTGCCCTGCACTTGC
TCATGCTACAAATGCCACTGGCATCTCTGCCGTAATGTTATCTGACAGGC
CGCCCGGGGTATGGTGCCCTGCCAGCGCACGCAGTCTGGCTCGTGCTACA
AACGGCATCCCGGCCATCATGTTTACTGATATTTCGAAGTAAAGCAGTAC
AGCAACAGCCTGAGACGACAGAGATTTGATGCGTGGCAGCATTTGGAGCA
TTCAAGTTGTGCTCTACTAGTAGCACATCTGTAGCCATGGGCAACAGGCA
CCCTTTGACTGTCGGTGGCAGGGCATTGCAATTTGCCAAGTTCAACTTGC
TGCACATATGTCACAGGCGTGCAATCAGAGCTTGAGCGTCAGGTAATGTG
TGCGCTGCACATGATGGCCTGTAAGTCTACGAAGGTGCAAAAAATGATGA
CCTTACGTAAGACTCTCCACGTCGTTCTCACGCCGCTATGTATCTATACT
GCAGTTGCAATATGACTGCAGATGTCACAGTAGTGCGTTCACAGCGTGCA
GTAGTAACTTGAAGTTGATGTAATAATACATTGTATGTAGTAAGCCTGCA
GGCATGTGTGTCGTCGGATACAGCTACTGCATTCAATGTTCCTTGCGTTC
CTGGGCTGCCGCCGCCGAAGTTCCACCTCCGGCGCAGTTCATCGCAAACC
GAACTTCAGTTTCAATGGGTAAATTTGCCATTTGGATGCAGTCAAACCTT
CACGCACCATAAAGTAAGATTCAAAAGCACCCTGCAAGTCCACACACCAT
GTGCTGCCGATGAGAATTTCACCCGTCAAAAGCGTGCTGTTATACTTGTT
CATCGATATGGAAATGCACAAGTAGTGTGTGAGGCTCTCAGTTATCACTT
ACACAGGCGTGCAAGCTTACCATCGTTAACCACAGCCTACTAGGTAGTAG
GGCGTCGCTCGGAACCTAGCAAATAATTGCTCAAATGATCAAACCGAGTA
AACTGTGTCAACCACATCCGAGTCGCTGTGCTTCTTGGGCCTTGTAGGTA
ACGCGCACGCAAGGGTGATCACATCTCAATTCCATGCATCGTTGCTTGTT
GTAGTCCTGCGTCATTTACTCTGTTGCGCCATTATAATAGTTGAACACAG
CCTAATTTTAGAATACGACAGTCATCGCACGACTTGGGCTGTTGCGCTAC
TAGTTGAGCGCACAGTAGTCAACAACTTCGTCAGCTTCCGTACTCTTGCA
CATGATAGAACTTGGAGATCCATAGTGTGACAGTCCCTGAACTACTGTAC
CCTTTACTGGTGACTGATCAGCTGGTGAGCAAACAGCCTGTATGGGCAAC
CCTTTTTCTCCTTACTTCCCTGTTCAACACTAACTCCCCCCCTCCTTGGT
TTCCAGCTGGTGCAACAGTAACTCTCCCCCCTCTTGATTTGGGAGTCCTA
GCTGATTAACGCTGACAACAACAGCTCCCCTGCTCCTGCACCAAGTGTGT
CGCTGACGCGCAACGCCAGGAACAGCCTGGTCGACCCAATTGCCGACCCC
GCCTTTGTGCTTCTGCAAGTACTACATATAGTATACACCAGTAGTAGCAT
GTGTACCGAAGGTGAGCAACACCGACATACTTCGGAAGCATTGTTACCTT
CCATGCTCATACTTTTAGCCGATTGGGCGCTTGTCCGACTGTAATACGTA
TACGTGTACGCACAGGGATGTGCATGATGCAGCTCACTGAGTGGCACTGG
ATTTGGCCATCTCAATTGATAACAGTTCTGCTAGTTTTGCTAACATCCTT
TGATTGCTGACATTAGGACACAAAGCTTGCATGTTTGGTGCACTGGTATG
GCGGAAGCGAACTGAGAGCCTCACATATCAATTACTATCTTGAAGTAGTA
CAATGTCATGCATTTTCCGAACAGTCAGGCGCGCTCTTGACTACTGCCCA
TCCCTACTTGTATCGTCATGCTCCGCACGTGTGCAGATCACCGTGCAGCA
GCTGTACTCCTTCCGCCCAGAGTACAACAACCTGACCACCTACTCCATGT
CGAGCAACTTCAATGGTGAGAGCGGGGGGTTGAACTTGGTGTCCTTCAAC
TTCAGGGCCAGCGGGTTGGGGGCGGACGTACTGGAGGAACAAGATCCGCT
TGACGTTGTCACCTTGCTGGGTTCTTTGTTCGGGTACGTTCCGACTATTT
TAGCAGGGTTTGCCGCGCTCTTCAGCGTCTTCATCAAGCGTAACTTGAGG
CAGGCAGAGGAACAAAAGATCACCAGGCTGATCGAAGTTCACAAGGGGGG
TCTTCAGGCGTAGAGCAGCTCGTGAGCCCAATTTGAAGCACCACTGCCGC
GCGAAAATGAAACTGTTTCAGCGACGTACGTGCTGCCGTGTACTGATGGA
TAGCTACCGTGACGGCAGAAAGGGTGGTGATCGAGGCTGGCAAAGCGAAG
TTGTCGTATCAGATCCGATTGCGTCAAGTTTGGGGATTGGTGGTAATATT
ATGCGAGTTTGCGACTGC

Coding sequence (CDS) from alignment at Contig_197:55392..63609-

>mRNA_16424 ID=mRNA_16424|Name=jgi.p|Trimin1|353930|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=588bp|location=Sequence derived from alignment at Contig_197:55392..63609- (Tribonema minus UTEX_B_3156 )
ATGGTGCAGAAGTTCCTGCTGAACGAGGAGACAGGACTGCCAACGGACGA
TGCTTTCTGCGTTGCCGTAGACATTAGCTCTGTGATCACGCCCACAAGTT
ACTTCTTCTTTCAGGCCAGCTTTGACCCGCTCAACCCAGATGAGACATCA
CCAGTGTGGTTCAACATCTTTCTGACATCGTACATGCCAGGACCGGACGT
GCCGGCCGGCCGCGGATACTACGTCAGCGAGGGCCGATTCTTCACCGCTT
ACGATTCGCAGATCACCGTGCAGCAGCTGTACTCCTTCCGCCCAGAGTAC
AACAACCTGACCACCTACTCCATGTCGAGCAACTTCAATGGTGAGAGCGG
GGGGTTGAACTTGGTGTCCTTCAACTTCAGGGCCAGCGGGTTGGGGGCGG
ACGTACTGGAGGAACAAGATCCGCTTGACGTTGTCACCTTGCTGGGTTCT
TTGTTCGGGTACGTTCCGACTATTTTAGCAGGGTTTGCCGCGCTCTTCAG
CGTCTTCATCAAGCGTAACTTGAGGCAGGCAGAGGAACAAAAGATCACCA
GGCTGATCGAAGTTCACAAGGGGGGTCTTCAGGCGTAG