Trimin1|348069|estExt_Genemark1.C_Ctg_190079 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348069
Unique NameTrimin1|348069|estExt_Genemark1.C_Ctg_190079
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length465
Homology
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A835Z725_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z725_9STRA)

HSP 1 Score: 833 bits (2152), Expect = 1.610e-303
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0
Query:    1 MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGXXXXXXXXXXXXXXXGGSGGLDEDXXXXXXXXSGEEGEWDDFGEGVPPAGYGALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAXXXXXXXXXXXXAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQAQADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGVEFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSDEDDTHMTASDSRQQ 464
            MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGXXXXXXXXXXXXXXXGGSGGLDEDXXXXXXXXSGEEGEWDDFGEGVPPAGYGALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAXXXXXXXXXXXXAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQAQADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGVEFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSDEDDTHMTASDSRQQ
Sbjct:    1 MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGXXXXXXXXXXXXXXXGGSGGLDEDXXXXXXXXSGEEGEWDDFGEGVPPAGYGALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAXXXXXXXXXXXXAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQAQADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGVEFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSDEDDTHMTASDSRQQ 464          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A6H5L249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L249_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.440e-27
Identity = 71/197 (36.04%), Postives = 101/197 (51.27%), Query Frame = 0
Query:   22 VLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRE--LPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRK---------------LQMADLFADGDE-------------MERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 188
            VLLE A A+F      + TKYY+ QI FW Q +  +P +       A+ +A    G+EGII +FD+ Q+  F+   +W    ++R+  A R+ V SK   L +               L+ A+   +GD              +  RR   + WCLDHGFEY+EA+C   + GG+ REKEGVPR+VEALQS  W  +
Sbjct:   62 VLLEQANAKFDVFPASITTKYYNAQISFWRQAQAAVPIL-------ALRSAEQLEGLEGIIVLFDLRQESGFDEASQWAALMEDREECAFRVCVGSKLDLLPQDPGDGAGFGTGAETTLEPAESGLEGDAAXXXXXXXXXXEGLRERRRRCLGWCLDHGFEYVEADCRDSNTGGELREKEGVPRIVEALQSNVWTDM 251          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: D7FHG9_ECTSI (IRC6, uncharacterized protein interacting with AP adaptor complexes n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.180e-20
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 0
Query:   44 STQIRFWEQRE--LPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRK----------------------LQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 188
            S  I FW Q +  +P +       A+ +A    G+EGII VFD+ Q+ + + V +W    ++R+  A R+ V SK   L +                      L+  D  A  + ++ RR   + WCLDHGFEY+EA+C     GG+ REKEGVPR+VEALQS  W  +
Sbjct:    4 SLTISFWRQAQAAVPVL-------ALRSAEQLEGLEGIIVVFDLRQESSLDEVAQWAALVEDREECAFRVCVGSKLDLLPEDPGDGTGFGTGAETAPEPAESGLEGGDAAA-AEGLQERRSRCLGWCLDHGFEYVEADCRDSYTGGELREKEGVPRIVEALQSNVWTGM 164          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A7J7Q817_9CHLO (Alpha and gamma adaptin binding protein p34-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q817_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 4.230e-9
Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = 0
Query:   32 AQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGA---IHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIH----WCLDHGFEYIEANCCRPDLGGDTR---EKEGVPRVVEALQSTAWASI 188
            A +   L TKYY+  +       L      H+      + A A E  ++ ++ VFD + + +F S R W     E D++ ++LLVA+KA  L++       A        R  ++H    WC+D GFEY+EA   +P +        E++GV RV+ ALQ+  W  +
Sbjct:   52 ADYTLRLDTKYYTADV-------LVRALGTHQQDKQQQLPAHAWEQ-LQALVLVFDASSEASFVSARSWAD-ARETDSIEVKLLVANKADRLQQQSTRASSAAAGAAGSCRAPWLHDAVSWCVDKGFEYVEAAAGKPAVDAALHLEGEQQGVVRVLAALQAHLWPGM 209          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: L1J370_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J370_GUITC)

HSP 1 Score: 69.7 bits (169), Expect = 5.500e-9
Identity = 44/162 (27.16%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   29 ARFAQHAWPLHT--KYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 188
            +R A+ +  LH   KY++ +++         +  VH    +    GE  +EG+I V+D +Q++ F+S ++W +  D+ D L L + VA+K   L+          GD  E  ++   +WC+ H  E++  +  +     D R+ EG+ RVVEA+ +  W+++
Sbjct:   46 SRAARDSTVLHVENKYFNAEVK---------VKVVHSVDEVREERGEKEIEGLILVYDSSQEEGFQSFQQWLSLLDQLD-LDLLICVANKTDLLK----------GDPSELLQDAE-NWCILHQIEFVHCSALQDRFTYD-RDSEGLDRVVEAVGNHTWSNL 185          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A0D2MZC2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MZC2_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 5.050e-7
Identity = 44/120 (36.67%), Postives = 55/120 (45.83%), Query Frame = 0
Query:   75 GVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPD------LGGDTREKEGVPRVVEALQSTAWASI 188
            G E +I V D T    F + R W    D   A  +RLL+A+KA        A   A G       E    WCLD GFEY+EA    P       L GD   ++GV RV+EALQ+  W  +
Sbjct:  108 GAEAVILVCDATNPSTFAAARRWAAAVDSSGA-GVRLLIANKAD------AAPRAAAGGSGAALPEA-AGWCLDEGFEYVEAAAGAPAADAALALDGD---RQGVVRVLEALQAHMWPGL 216          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A7S0F5E3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F5E3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.470e-7
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  143 IHWCLDHGFEYIEANCCRPDL--GGDTREKEGVPRVVEALQSTAWAS 187
            I WCLDHG+EY+EAN        G D R+KEG  R++EA+Q T WAS
Sbjct:    1 IMWCLDHGYEYVEANLSAEGQAKGHDDRDKEGFARIIEAIQGTVWAS 47          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A7S2S1P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1P7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 6.660e-7
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
Query:  134 EMERRREVYIHWCLDHGFEYIEANCCRP--DLGGDTREKEGVPRVVEALQSTAWAS 187
            E E+     + WCLD G+EY+EA+        G D REK+G PR++EA+Q T W+S
Sbjct:    1 EYEKEYSRRVLWCLDRGYEYVEADLSEKGQSTGHDVREKDGFPRIIEAIQGTVWSS 56          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A7S2K1K1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1K1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.970e-6
Identity = 30/47 (63.83%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  145 WCLDHGFEYIEANCCRPD----LGGDTREKEGVPRVVEALQSTAWAS 187
            WCLDHGFEYIEA C   D    +G D REKEG  RVVEA+ ST W S
Sbjct:   60 WCLDHGFEYIEA-CNLSDTSVLVGHDVREKEGFARVVEAIGSTIWTS 105          
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Match: A0A4Y2BPW8_ARAVE (Alpha-and gamma-adaptin-binding protein p34 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BPW8_ARAVE)

HSP 1 Score: 58.2 bits (139), Expect = 2.980e-6
Identity = 43/173 (24.86%), Postives = 74/173 (42.77%), Query Frame = 0
Query:   26 AAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREK-----EGVPRVVEALQSTAWASIGAPGR 193
            A+      + W    KYYS++I  +   E   + +   D           ++ +I  FD  +  +F+ V  W  F  + DA  ++LL+ +               +       R+  + WC+++ FE +E N   PD   +  E+     +G  RVVEALQS AWA++   G+
Sbjct:   34 ASSCAIKGYPWSFKNKYYSSKINLYALEEKAELDSAFCDS----------IKAVIFYFDSQKQSSFDDVLSWLLFLKDIDA-EVQLLLCNNC-----------LEENSNPALGRKNILKWCVENQFELVELNPI-PDSEEEEDEEPFKGAKGYGRVVEALQSYAWANLVMEGK 183          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348069 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835Z725_9STRA1.610e-303100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L249_9PHAE3.440e-2736.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG9_ECTSI3.180e-2035.50IRC6, uncharacterized protein interacting with AP ... [more]
A0A7J7Q817_9CHLO4.230e-929.34Alpha and gamma adaptin binding protein p34-domain... [more]
L1J370_GUITC5.500e-927.16Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A0D2MZC2_9CHLO5.050e-736.67Uncharacterized protein (Fragment) n=1 Tax=Monorap... [more]
A0A7S0F5E3_9STRA5.470e-755.32Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2S1P7_9STRA6.660e-744.64Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2K1K1_9STRA1.970e-663.83Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A4Y2BPW8_ARAVE2.980e-624.86Alpha-and gamma-adaptin-binding protein p34 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11960coord: 21..189
e-value: 5.0E-14
score: 54.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..464
IPR019341Alpha/gamma-adaptin-binding protein p34PANTHERPTHR14659ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34coord: 32..447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:648131..653718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348069mRNA_5513Tribonema minus UTEX_B_3156 mRNAContig_19 648131..653745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348069|estExt_Genemark1.C_Ctg_190079 ID=Trimin1|348069|estExt_Genemark1.C_Ctg_190079|Name=jgi.p|Trimin1|348069|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=465bp
MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFW
EQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTF
CDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHG
FEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGGG
GGGFGAHATAAVAGGSGGLDEDGGSEEGGGSGEEGEWDDFGEGVPPAGYG
ALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAAAAAAAAAAEA
EAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQA
QADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGV
EFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSD
EDDTHMTASDSRQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019341Alpha/Gamma-adaptin-bd_p34