Trimin1|348043|estExt_Genemark1.C_Ctg_190005 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A835Z6Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y5_9STRA) HSP 1 Score: 2166 bits (5612), Expect = 0.000e+0 Identity = 1450/1450 (100.00%), Postives = 1450/1450 (100.00%), Query Frame = 0
Query: 1 MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHAKVPLPFPSAALLGLAPLCAAXXXXXXXHVQVYLYPLSVAAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARIIAEQLRLLLRCHARLAALATEPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSXXXXXXXXXXXXXXXXXXXXXXXAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAAAWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEARRGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPXXXXXXXXRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGIRLVSKLERTGLSVEASGIWLEGKLEEEDAGDNXXXXXXXXXXXXXXXXXXXXXXAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLGAVHAVAPAFALERALLAHQRVXXXXXXXXXXXXXXXXXXXXXQVGTALSG 1450
MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHAKVPLPFPSAALLGLAPLCAAXXXXXXXHVQVYLYPLSVAAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARIIAEQLRLLLRCHARLAALATEPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSXXXXXXXXXXXXXXXXXXXXXXXAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAAAWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEARRGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPXXXXXXXXRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGIRLVSKLERTGLSVEASGIWLEGKLEEEDAGDNXXXXXXXXXXXXXXXXXXXXXXAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLGAVHAVAPAFALERALLAHQRVXXXXXXXXXXXXXXXXXXXXXQVGTALSG
Sbjct: 1 MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHAKVPLPFPSAALLGLAPLCAAXXXXXXXHVQVYLYPLSVAAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARIIAEQLRLLLRCHARLAALATEPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSXXXXXXXXXXXXXXXXXXXXXXXAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAAAWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEARRGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPXXXXXXXXRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGIRLVSKLERTGLSVEASGIWLEGKLEEEDAGDNXXXXXXXXXXXXXXXXXXXXXXAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLGAVHAVAPAFALERALLAHQRVXXXXXXXXXXXXXXXXXXXXXQVGTALSG 1450
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI) HSP 1 Score: 165 bits (418), Expect = 2.550e-37 Identity = 203/813 (24.97%), Postives = 304/813 (37.39%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPL--IFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQ-VPS----TQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLC---------LDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDL 817
TGVGKTLV+++LI+ F+ + +ARR+ K +W +FL PTQ+LV QQA +S ++ FTG+ +VG++LD W W+ +VLVMTP ++LNLL G YL L+DVGV++ DECH ARKKHPYA++MA Y+ L ++ PL +FGMTASPT +C V+ C AYVCE D I + A + + YE + P+ G + + +A+ +P T+ + +L + + S L I+ R+ S + G G A+ + D R +G + A D + ++A +G + G+ A M ++ L + LL + D + FRCMVFVERRATARV+ L H + SG G + A+ RG + G + F+ G +++LVTTD C+EGIDVPEC LV+S+D IK R L+H RGR R+ GG+F +V E GD + + L+E+E L HE S VPL+ P++ +D+D A L+++ A+G P + C + LP+F+ +
Sbjct: 25 TGVGKTLVSLMLIRDFY--------FEDARRRE-----SKNHKWCIFLCPTQELVFQQA-------------KSAQI--FTGVRCGPYVGKDLDYWGVKKWKEEMDNKEVLVMTPNALLNLLHRGNEYLSLKDVGVLVFDECHKARKKHPYARVMAFYLELRKNRGPLPKVFGMTASPT-----------------------------------------------IECVEVLQCKAYVCEDD--LIEEFQANADWELLSYEAVVGPVLFSYQHLGLWCAMRHIRVAENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCGIERAPRSSSPAVPGIDGRGASKGVCDGGLPVPRRGGSAGGR--------RADGGVALRPLAGTPDDPMEEDGEEREXXXLDGVEAQNKGGGSAASGVGAAGWGMTPGRVITLVKTLLRVSEQWGDEAKN------------------------FRCMVFVERRATARVLSAFLS-------------------------------------------------------------------------------HSL--SGRFCCGFVV-------------------GRANARG-----DDFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMV-EDGDDMERDR------------VSLMLMESEDIKRF----------QLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPL--------LICRLELPSFMGM 592
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE) HSP 1 Score: 108 bits (270), Expect = 8.190e-20 Identity = 86/307 (28.01%), Postives = 135/307 (43.97%), Query Frame = 0
Query: 648 FKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLC---------LDLDAAVSLLHEIHFALGL-------------PCLPPFTYVL--GDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHA--KVPLPFPSAALLGLAP 928
F+ G +++LVTTD C+EGIDVPEC LV+S+D IK R L+H RGR R+ GG+F +V E GD + + + L+E+E L HE S VPL+ P++ +D+D A L+++ A+G PC PF ++ C + LP+F+ + PT D A ++D+ F +K A+A +F+A+ ++ G + + L RL + G+D LV+ A K +P P +G+ P
Sbjct: 649 FRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMV-EDGDDRERDR------------VSLMLMESEDIKRF----------QLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLIAEEKSGPCEAPFGAMMYREPSFKCRLELPSFMGM---------------------PT-IDTAVLVDEHFW-----SKSQARAAVSFLAVVQMLEKGYIDERLNPTRTKDRLVVEKRRGYDPVLVEGKEARMKAKMPIPRPVAMGILP 905
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: F6H2T9_VITVI (Helicase ATP-binding domain-containing protein n=3 Tax=Vitis vinifera TaxID=29760 RepID=F6H2T9_VITVI) HSP 1 Score: 99.8 bits (247), Expect = 1.400e-18 Identity = 67/177 (37.85%), Postives = 92/177 (51.98%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASP 196
TG GKT++A++LI R G + D R + +FLAPT LV QQ I D TG + + G + +D+W+A W++ + DVLVMTP +L+ L KA+L LE V ++I+DECH A HPY +IM + +DK P IFGMTASP
Sbjct: 68 TGTGKTMIALMLI----------------REIGQAVKADGRKLFIIFLAPTVHLVNQQ-FKVIKDS--------------TGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDAL--RKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDK-PKIFGMTASP 210
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A507D712_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D712_9FUNG) HSP 1 Score: 101 bits (252), Expect = 4.310e-18 Identity = 69/178 (38.76%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGR-ELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLD-KRPLIFGMTASP 196
TG GKTL+A LLI+H Y + R G+ R VFLAPT LV QQA + TGL + FVG ++D W W + DV+ MTP LN+L Y++L VG+++ DECH ARKK PY+ IM Y + + +RPL+ GMTASP
Sbjct: 25 TGTGKTLIACLLIKHV---------YDQDRNSGISG------RLCVFLAPTVILVDQQAK---------------YIQEKTGLKVRQFVGSMDVDHWNEDKWAKELTTADVVAMTPQIFLNIL--STNYINLTQVGLLVFDECHHARKKSPYSLIMKDYYSKMNEAERPLLLGMTASP 170
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A7S4I3I3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3I3_9EUKA) HSP 1 Score: 100 bits (250), Expect = 4.740e-18 Identity = 69/177 (38.98%), Postives = 90/177 (50.85%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMAR-YVALPLDKRPLIFGMTASP 196
TG+GKTL+++LL+QH+ S+ + V VFLAPT LV QQA I ++A L+ +F G+ +W DW++ RQ DV+VMTP LNLLI G + L V ++I DECH KKHPY I Y +RP IFGMTASP
Sbjct: 25 TGIGKTLISVLLLQHY-------SQLFRKEEKNV-----------VFLAPTVPLVEQQATY-IQENA-------------WDLSVAAFAGKGEYNWPTKDWKQEMRQYDVIVMTPMLFLNLLIAG--FCSLSSVSLLIFDECHHCTKKHPYNIIFTDFYYDCKTSERPRIFGMTASP 167
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A7J6V7P9_THATH (Endoribonuclease dicer-like protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V7P9_THATH) HSP 1 Score: 101 bits (251), Expect = 1.290e-17 Identity = 66/178 (37.08%), Postives = 91/178 (51.12%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDD-WTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMAR-YVALPLDKRPLIFGMTASP 196
TG GKTL+A+LLI+ +R M+ + R ++FL P LV QQA + + TG + + G D W A WQR F VLVMT +LN+L H + + +E + ++I+DECH A KKHPY+ +M+ Y P +KRP IFGMTASP
Sbjct: 358 TGAGKTLIAVLLIKSVYRD----------------MLSENRKMLAIFLVPKVPLVYQQA---------------EVIREGTGYSVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRH--SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAIFGMTASP 502
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A507F8E4_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F8E4_9FUNG) HSP 1 Score: 100 bits (250), Expect = 1.460e-17 Identity = 68/179 (37.99%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMA-RYVALPLDKRPLIFGMTASPT 197
TG GKTL++++LI H R + RR P + R R SVFL P LV QQ + V L + + G +DDW+ W+ + DV+VMT N+L +AY+ +E++ +II DECH ARK H Y QIM Y P RP IFGMTASPT
Sbjct: 35 TGSGKTLISVMLINHMAR-------LEQERRTANPGL---RTRLSVFLVPLVPLVLQQ---------------EEYVRKHCNLKIKHYYGAMGVDDWSEQRWKNEISEADVMVMTADIFRNILC--RAYIGMEEINLIIFDECHHARKNHAYNQIMGIHYKQCPESARPKIFGMTASPT 186
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A5D2UIQ6_GOSMU (Helicase ATP-binding domain-containing protein n=2 Tax=Gossypium mustelinum TaxID=34275 RepID=A0A5D2UIQ6_GOSMU) HSP 1 Score: 96.7 bits (239), Expect = 1.770e-17 Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASP 196
TGVGKT++A++LI+ F Q + K++ +FLAPT LV QQ + V T L + + G + +D+WT W++ ++ DVLVMTP +L+ L KA+L LE V ++I+DECH A HPYA+IM + +K P IFGMTASP
Sbjct: 89 TGVGKTMIAVMLIKDF--------------GQAIESTESKKL--IIFLAPTVHLVNQQF---------------EYVKDHTSLEVEQYYGAKGVDEWTLDCWEKETKEHDVLVMTPQILLDAL--RKAFLSLEMVSLMIIDECHRATGNHPYAKIMKEFYHKSNNK-PKIFGMTASP 231
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: UPI00053FC4DE (endoribonuclease Dicer homolog 3a isoform X1 n=3 Tax=Vitis TaxID=3603 RepID=UPI00053FC4DE) HSP 1 Score: 99.8 bits (247), Expect = 3.600e-17 Identity = 67/177 (37.85%), Postives = 92/177 (51.98%), Query Frame = 0
Query: 21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASP 196
TG GKT++A++LI R G + D R + +FLAPT LV QQ I D TG + + G + +D+W+A W++ + DVLVMTP +L+ L KA+L LE V ++I+DECH A HPY +IM + +DK P IFGMTASP
Sbjct: 68 TGTGKTMIALMLI----------------REIGQAVKADGRKLFIIFLAPTVHLVNQQ-FKVIKDS--------------TGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDAL--RKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDK-PKIFGMTASP 210 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|348043|estExt_Genemark1.C_Ctg_190005 ID=Trimin1|348043|estExt_Genemark1.C_Ctg_190005|Name=jgi.p|Trimin1|348043|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1451bpback to top |