Trimin1|348043|estExt_Genemark1.C_Ctg_190005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348043
Unique NameTrimin1|348043|estExt_Genemark1.C_Ctg_190005
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1451
Homology
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A835Z6Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y5_9STRA)

HSP 1 Score: 2166 bits (5612), Expect = 0.000e+0
Identity = 1450/1450 (100.00%), Postives = 1450/1450 (100.00%), Query Frame = 0
Query:    1 MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHAKVPLPFPSAALLGLAPLCAAXXXXXXXHVQVYLYPLSVAAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARIIAEQLRLLLRCHARLAALATEPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSXXXXXXXXXXXXXXXXXXXXXXXAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAAAWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEARRGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPXXXXXXXXRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGIRLVSKLERTGLSVEASGIWLEGKLEEEDAGDNXXXXXXXXXXXXXXXXXXXXXXAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLGAVHAVAPAFALERALLAHQRVXXXXXXXXXXXXXXXXXXXXXQVGTALSG 1450
            MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHAKVPLPFPSAALLGLAPLCAAXXXXXXXHVQVYLYPLSVAAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARIIAEQLRLLLRCHARLAALATEPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSXXXXXXXXXXXXXXXXXXXXXXXAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAAAWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEARRGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPXXXXXXXXRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGIRLVSKLERTGLSVEASGIWLEGKLEEEDAGDNXXXXXXXXXXXXXXXXXXXXXXAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLGAVHAVAPAFALERALLAHQRVXXXXXXXXXXXXXXXXXXXXXQVGTALSG
Sbjct:    1 MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHAKVPLPFPSAALLGLAPLCAAXXXXXXXHVQVYLYPLSVAAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARIIAEQLRLLLRCHARLAALATEPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSXXXXXXXXXXXXXXXXXXXXXXXAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAAAWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEARRGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPXXXXXXXXRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGIRLVSKLERTGLSVEASGIWLEGKLEEEDAGDNXXXXXXXXXXXXXXXXXXXXXXAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLGAVHAVAPAFALERALLAHQRVXXXXXXXXXXXXXXXXXXXXXQVGTALSG 1450          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.550e-37
Identity = 203/813 (24.97%), Postives = 304/813 (37.39%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPL--IFGMTASPTKXXXXXXXXXXXXXXXXXXXXXXXXXKERRLXXXXXXXXXXDALKLKSQCCHVMCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLTMLFMAQ-VPS----TQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEGGSWAATRLDDXXXXXXXXXXXXXXXXXXXXXXXRLEGHMQTHFYAYCADQRRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLLLENAPPRADASAGATGDGAPAAXXXXXXXXXXXXXXAFRCMVFVERRATARVVCDLLKCVYGPDEDGGGARXXXXXXXXXXXXXXXXXXXXDAARXXXXXXXXXXXXXXXXXRDAARRDXXXXXXXXXXXXXXXARRHPVLPSGYILGGVLTTLXXXXXXXXXXLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLC---------LDLDAAVSLLHEIHFALGLPCLPPFTYVLGDGITCEVHLPAFLDL 817
            TGVGKTLV+++LI+ F+        + +ARR+       K  +W +FL PTQ+LV QQA             +S ++  FTG+    +VG++LD W    W+      +VLVMTP ++LNLL  G  YL L+DVGV++ DECH ARKKHPYA++MA Y+ L  ++ PL  +FGMTASPT                                                +C  V+ C AYVCE D   I  + A  +   + YE  + P+       G    +  + +A+ +P     T+    + +L +  + S L      I+   R+ S  + G  G  A+  + D                       R +G +     A   D       +         ++A  +G   +  G+  A   M   ++  L + LL  +    D +                          FRCMVFVERRATARV+   L                                                                                H +  SG    G +                      A+ RG     +  G       +  F+ G +++LVTTD C+EGIDVPEC LV+S+D IK  R L+H RGR R+ GG+F  +V E GD   +              +   L+E+E                L HE  S  VPL+   P++          +D+D A  L+++   A+G    P         + C + LP+F+ +
Sbjct:   25 TGVGKTLVSLMLIRDFY--------FEDARRRE-----SKNHKWCIFLCPTQELVFQQA-------------KSAQI--FTGVRCGPYVGKDLDYWGVKKWKEEMDNKEVLVMTPNALLNLLHRGNEYLSLKDVGVLVFDECHKARKKHPYARVMAFYLELRKNRGPLPKVFGMTASPT-----------------------------------------------IECVEVLQCKAYVCEDD--LIEEFQANADWELLSYEAVVGPVLFSYQHLGLWCAMRHIRVAENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCGIERAPRSSSPAVPGIDGRGASKGVCDGGLPVPRRGGSAGGR--------RADGGVALRPLAGTPDDPMEEDGEEREXXXLDGVEAQNKGGGSAASGVGAAGWGMTPGRVITLVKTLLRVSEQWGDEAKN------------------------FRCMVFVERRATARVLSAFLS-------------------------------------------------------------------------------HSL--SGRFCCGFVV-------------------GRANARG-----DDFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMV-EDGDDMERDR------------VSLMLMESEDIKRF----------QLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPL--------LICRLELPSFMGM 592          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 8.190e-20
Identity = 86/307 (28.01%), Postives = 135/307 (43.97%), Query Frame = 0
Query:  648 FKEGRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQFFTLVGEPGDYKAKXXXXXXXXXXXXXXLQRWLLEAEQXXXXXXXXXXXXXNSLAHEDVSAEVPLKALFPDLC---------LDLDAAVSLLHEIHFALGL-------------PCLPPFTYVL--GDGITCEVHLPAFLDLNRSRLSXXXXXXXXXXXXXLPPTDCDYAGVLDDDFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYPGFDAALVKDNHA--KVPLPFPSAALLGLAP 928
            F+ G +++LVTTD C+EGIDVPEC LV+S+D IK  R L+H RGR R+ GG+F  +V E GD + +              +   L+E+E                L HE  S  VPL+   P++          +D+D A  L+++   A+G              PC  PF  ++       C + LP+F+ +                     PT  D A ++D+ F      +K  A+A  +F+A+ ++   G + + L       RL  +   G+D  LV+   A  K  +P P    +G+ P
Sbjct:  649 FRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMV-EDGDDRERDR------------VSLMLMESEDIKRF----------QLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLIAEEKSGPCEAPFGAMMYREPSFKCRLELPSFMGM---------------------PT-IDTAVLVDEHFW-----SKSQARAAVSFLAVVQMLEKGYIDERLNPTRTKDRLVVEKRRGYDPVLVEGKEARMKAKMPIPRPVAMGILP 905          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: F6H2T9_VITVI (Helicase ATP-binding domain-containing protein n=3 Tax=Vitis vinifera TaxID=29760 RepID=F6H2T9_VITVI)

HSP 1 Score: 99.8 bits (247), Expect = 1.400e-18
Identity = 67/177 (37.85%), Postives = 92/177 (51.98%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASP 196
            TG GKT++A++LI                R  G  +  D R  + +FLAPT  LV QQ    I D               TG   + + G + +D+W+A  W++   + DVLVMTP  +L+ L   KA+L LE V ++I+DECH A   HPY +IM  +    +DK P IFGMTASP
Sbjct:   68 TGTGKTMIALMLI----------------REIGQAVKADGRKLFIIFLAPTVHLVNQQ-FKVIKDS--------------TGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDAL--RKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDK-PKIFGMTASP 210          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A507D712_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D712_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 4.310e-18
Identity = 69/178 (38.76%), Postives = 90/178 (50.56%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGR-ELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLD-KRPLIFGMTASP 196
            TG GKTL+A LLI+H          Y + R  G+        R  VFLAPT  LV QQA                 +   TGL  + FVG  ++D W    W +     DV+ MTP   LN+L     Y++L  VG+++ DECH ARKK PY+ IM  Y +   + +RPL+ GMTASP
Sbjct:   25 TGTGKTLIACLLIKHV---------YDQDRNSGISG------RLCVFLAPTVILVDQQAK---------------YIQEKTGLKVRQFVGSMDVDHWNEDKWAKELTTADVVAMTPQIFLNIL--STNYINLTQVGLLVFDECHHARKKSPYSLIMKDYYSKMNEAERPLLLGMTASP 170          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A7S4I3I3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3I3_9EUKA)

HSP 1 Score: 100 bits (250), Expect = 4.740e-18
Identity = 69/177 (38.98%), Postives = 90/177 (50.85%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMAR-YVALPLDKRPLIFGMTASP 196
            TG+GKTL+++LL+QH+       S+      + V           VFLAPT  LV QQA   I ++A               L+  +F G+   +W   DW++  RQ DV+VMTP   LNLLI G  +  L  V ++I DECH   KKHPY  I    Y      +RP IFGMTASP
Sbjct:   25 TGIGKTLISVLLLQHY-------SQLFRKEEKNV-----------VFLAPTVPLVEQQATY-IQENA-------------WDLSVAAFAGKGEYNWPTKDWKQEMRQYDVIVMTPMLFLNLLIAG--FCSLSSVSLLIFDECHHCTKKHPYNIIFTDFYYDCKTSERPRIFGMTASP 167          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A7J6V7P9_THATH (Endoribonuclease dicer-like protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V7P9_THATH)

HSP 1 Score: 101 bits (251), Expect = 1.290e-17
Identity = 66/178 (37.08%), Postives = 91/178 (51.12%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRELDD-WTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMAR-YVALPLDKRPLIFGMTASP 196
            TG GKTL+A+LLI+  +R                 M+ + R   ++FL P   LV QQA               + +   TG +   + G    D W A  WQR F    VLVMT   +LN+L H  + + +E + ++I+DECH A KKHPY+ +M+  Y   P +KRP IFGMTASP
Sbjct:  358 TGAGKTLIAVLLIKSVYRD----------------MLSENRKMLAIFLVPKVPLVYQQA---------------EVIREGTGYSVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRH--SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAIFGMTASP 502          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A507F8E4_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F8E4_9FUNG)

HSP 1 Score: 100 bits (250), Expect = 1.460e-17
Identity = 68/179 (37.99%), Postives = 89/179 (49.72%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMA-RYVALPLDKRPLIFGMTASPT 197
            TG GKTL++++LI H  R         + RR   P +   R R SVFL P   LV QQ                + V     L  + + G   +DDW+   W+    + DV+VMT     N+L   +AY+ +E++ +II DECH ARK H Y QIM   Y   P   RP IFGMTASPT
Sbjct:   35 TGSGKTLISVMLINHMAR-------LEQERRTANPGL---RTRLSVFLVPLVPLVLQQ---------------EEYVRKHCNLKIKHYYGAMGVDDWSEQRWKNEISEADVMVMTADIFRNILC--RAYIGMEEINLIIFDECHHARKNHAYNQIMGIHYKQCPESARPKIFGMTASPT 186          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: A0A5D2UIQ6_GOSMU (Helicase ATP-binding domain-containing protein n=2 Tax=Gossypium mustelinum TaxID=34275 RepID=A0A5D2UIQ6_GOSMU)

HSP 1 Score: 96.7 bits (239), Expect = 1.770e-17
Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASP 196
            TGVGKT++A++LI+ F               Q +     K++   +FLAPT  LV QQ                + V   T L  + + G + +D+WT   W++  ++ DVLVMTP  +L+ L   KA+L LE V ++I+DECH A   HPYA+IM  +     +K P IFGMTASP
Sbjct:   89 TGVGKTMIAVMLIKDF--------------GQAIESTESKKL--IIFLAPTVHLVNQQF---------------EYVKDHTSLEVEQYYGAKGVDEWTLDCWEKETKEHDVLVMTPQILLDAL--RKAFLSLEMVSLMIIDECHRATGNHPYAKIMKEFYHKSNNK-PKIFGMTASP 231          
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Match: UPI00053FC4DE (endoribonuclease Dicer homolog 3a isoform X1 n=3 Tax=Vitis TaxID=3603 RepID=UPI00053FC4DE)

HSP 1 Score: 99.8 bits (247), Expect = 3.600e-17
Identity = 67/177 (37.85%), Postives = 92/177 (51.98%), Query Frame = 0
Query:   21 TGVGKTLVAMLLIQHFFRSSTRPSEYHEARRQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAFTGLATQSFVGRE-LDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLDLEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASP 196
            TG GKT++A++LI                R  G  +  D R  + +FLAPT  LV QQ    I D               TG   + + G + +D+W+A  W++   + DVLVMTP  +L+ L   KA+L LE V ++I+DECH A   HPY +IM  +    +DK P IFGMTASP
Sbjct:   68 TGTGKTMIALMLI----------------REIGQAVKADGRKLFIIFLAPTVHLVNQQ-FKVIKDS--------------TGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDAL--RKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDK-PKIFGMTASP 210          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348043 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6Y5_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FZW2_ECTSI2.550e-3724.97Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5KQM7_9PHAE8.190e-2028.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F6H2T9_VITVI1.400e-1837.85Helicase ATP-binding domain-containing protein n=3... [more]
A0A507D712_9FUNG4.310e-1838.76Uncharacterized protein n=2 Tax=Synchytrium endobi... [more]
A0A7S4I3I3_9EUKA4.740e-1838.98Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A7J6V7P9_THATH1.290e-1737.08Endoribonuclease dicer-like protein n=1 Tax=Thalic... [more]
A0A507F8E4_9FUNG1.460e-1737.99Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]
A0A5D2UIQ6_GOSMU1.770e-1737.29Helicase ATP-binding domain-containing protein n=2... [more]
UPI00053FC4DE3.600e-1737.85endoribonuclease Dicer homolog 3a isoform X1 n=3 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..227
e-value: 0.0089
score: 15.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 21..214
score: 13.237816
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 606..696
e-value: 1.8E-4
score: 30.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 643..694
e-value: 3.4E-10
score: 40.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 600..754
score: 9.796875
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 18..199
e-value: 4.5E-34
score: 120.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 628..706
e-value: 1.3E-16
score: 62.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 91..707
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 21..197
e-value: 6.1E-9
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1324..1362
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 441..708
NoneNo IPR availablePANTHERPTHR14074:SF16ATP-DEPENDENT RNA HELICASE DDX58-RELATEDcoord: 441..708
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 21..197
NoneNo IPR availablePANTHERPTHR14074:SF16ATP-DEPENDENT RNA HELICASE DDX58-RELATEDcoord: 21..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:24936..46060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348043mRNA_5450Tribonema minus UTEX_B_3156 mRNAContig_19 24936..46060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348043|estExt_Genemark1.C_Ctg_190005 ID=Trimin1|348043|estExt_Genemark1.C_Ctg_190005|Name=jgi.p|Trimin1|348043|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1451bp
MPPFFVPAARLLIYHFYFNLTGVGKTLVAMLLIQHFFRSSTRPSEYHEAR
RQGVPMVVDKRVRWSVFLAPTQQLVRQQALDGIGDDAAAVGQQSDRVAAF
TGLATQSFVGRELDDWTAPDWQRHFRQTDVLVMTPGSMLNLLIHGKAYLD
LEDVGVIIMDECHCARKKHPYAQIMARYVALPLDKRPLIFGMTASPTKEI
MTRYAALSLDKRPLIFGMTASPTKERRLIFGMTASPTKDALKLKSQCCHV
MCCTAYVCEPDDKAISAYAAVPETTSVYYEIPLAPIQRVSAAFGAADLLT
MLFMAQVPSTQHADALAKLLELASASNLLNLRPYIKDHLRNESLYMLGEG
GSWAATRLDDLRNESLYMLGEYGSWAATRLVLLRLEGHMQTHFYAYCADQ
RRLTQIKMLLSIVRAELKAAAEGEEESDDGLPLALHRMCAPKLHALARLL
LENAPPRADASAGATGDGAPAAVVAAAASAAAAAAAAFRCMVFVERRATA
RVVCDLLKCVYGPDEDGGGARRRATARVVCDLLKCVYGPDEDAARVVCDL
RKCVYGPDKDAARDAARRDLLKCVYWPDEDGAATARRHPVLPSGYILGGV
LTTLGYILGGVLKTLSTHVAAATADWRGQVDAWEVAGDRHSKYAMKHFKE
GRLKLLVTTDTCAEGIDVPECGLVISLDPIKHVRQLMHMRGRTRATGGQF
FTLVGEPGDYKAKFFTLVGEPGDYKAKLQRWLLEAEQLQRWLLEAEQVRR
NSLAHEDVSAEVPLKALFPDLCLDLDAAVSLLHEIHFALGLPCLPPFTYV
LGDGITCEVHLPAFLDLNRSRLSVHLPAFLDVNRSRLPPTDCDYAGVLDD
DFIFPYCRNKRGAKAVAAFIALCRLHRAGILSDHLTVAPPTSRLTGQNYP
GFDAALVKDNHAKVPLPFPSAALLGLAPLCAAAAAAATAHVQVYLYPLSV
AAPVGGRLAAITHAHRVALLVLRPLPHAVLTAWGAVLRNYSGGGSGSSGG
GGGSGGGSSGGGGGGGGGGGGAAAATPARIIAEQLRLLLRCHARLAALAT
EPKALPTGAYDIASADPDPAHDRGYCMVPLVTRDGSGGSGGGGGGGWGGG
CGSGGGGGSGGGAVEIDWETAEQLIAITAAERVNAASSAPRRAPLAGAAA
AWHQRTDGEGTMAVTVRERRSDVKRTVHRTRYAARRSPSALTLGGYAEAR
RGAAADAAAAGAAKKGSVVLGDLLGKQGCAKAARPARSTSHLQPGDLLGK
YGRAELAYYMRMHELASLDSSTLLHPALRLPRGETVFKQAIAPSLGLSGI
RLVSKLERTGLSVEASGIWLEGKLEEEDAGDNDDNNARASANDDGDNSDD
DGEDAEPPIQGGGWDSVVGSAAACGAVLAVLHPSHRQCFASEPPAPVVLG
AVHAVAPAFALERALLAHQRVVLGAVHAVAPAFALERALLAHQVGTALSG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR027417P-loop_NTPase
IPR006935Helicase/UvrB_N