Trimin1|348005|estExt_Genemark1.C_Ctg_180032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348005
Unique NameTrimin1|348005|estExt_Genemark1.C_Ctg_180032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length371
Homology
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A836CJ02_9STRA (Tat binding protein 1-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ02_9STRA)

HSP 1 Score: 537 bits (1384), Expect = 1.060e-189
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0
Query:    1 MGGSSDESDAFVDEESEDAVVSSAGDESDXXXXXXXEKPKKKAPAKTPAKAKXXXSTPKXXXXXXXXXXXXXAPKTTVSRGTPPMAEAKPAAARKRAAPSADGNSATKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPAAAAVKKTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKMSLGEPDSQHPAHARA 370
            MGGSSDESDAFVDEESEDAVVSSAGDESDXXXXXXXEKPKKKAPAKTPAKAKXXXSTPKXXXXXXXXXXXXXAPKTTVSRGTPPMAEAKPAAARKRAAPSADGNSATKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPAAAAVKKTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKMSLGEPDSQHPAHARA
Sbjct:    1 MGGSSDESDAFVDEESEDAVVSSAGDESDXXXXXXXEKPKKKAPAKTPAKAKXXXSTPKXXXXXXXXXXXXXAPKTTVSRGTPPMAEAKPAAARKRAAPSADGNSATKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPAAAAVKKTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKMSLGEPDSQHPAHARA 370          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: D7G4U2_ECTSI (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U2_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.990e-43
Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 0
Query:  151 KTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRL-----EADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKM 355
            KTP+ AV DYM Q+NRPYS +N+FDNL +KIP+ MVQK+LD+LV+ G L  +EYGKA IYY NQ  L     +A   +++ L  E K L++Q            +  ++L+ QP DD L ++L       +  + R    +G QG       M  A+  FNK R +WV RK  A + VD I+DGMEKKPKVVM+++GV+PD D + PPKM
Sbjct:  112 KTPKAAVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQEQQTRARASSLSCQPTDDELTKKLANCAQELEQAEARNGAAKG-QGRSVAAGGMKTAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEDPI-PPKM 319          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A6H5JRD1_9PHAE (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD1_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.800e-42
Identity = 100/220 (45.45%), Postives = 137/220 (62.27%), Query Frame = 0
Query:  145 AAAAVKKTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRL-----EADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRG--AQGAGADPAA--MSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKM 355
            A+ +  KTP+ AV DYM Q+NRPYS +N+FDNL +KIP+ MVQK+LD+LV+ G L  +EYGKA IYY NQ  L     +A   +++ L  E K L++Q            +  ++L+ QP DD L ++L     AN A++   A  R   A+G G   AA  M  A+  FNK R +WV RK  A + VD I+DGMEKKPKVVM+++GV+PD + + PPKM
Sbjct:  219 ASGSAPKTPKAAVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQEQQTRARVSSLSCQPTDDELAKKL-----ANSAQELEQAEARNGAAKGQGRSVAAGGMKAAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEEPI-PPKM 432          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A6A3DU84_9STRA (TBPIP domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DU84_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.600e-29
Identity = 79/197 (40.10%), Postives = 112/197 (56.85%), Query Frame = 0
Query:  154 EQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEE--KDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDAD 348
            E AV DYMR+TNRPYS++N+F+N+HR I +  + K+LD LV   EL+SK YGKA IYY NQ+ L     E + LA EE  K ++A             +  A + +Q +D  L+  L  L       ++++  +     A   P   +  +  F K R  WV RK  A + V++I+DGMEKKPK V+DL+GV+ DAD
Sbjct:  128 EAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQSNLPVP-SEEERLALEEQIKVVTADCAASEQELKSAEATLAGITSQISDADLDAALKQLDEEAAELEKKVETLDQPGRAPVSPGRKNALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKPKAVIDLVGVETDAD 323          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A225V1S8_9STRA (Pairing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V1S8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.210e-29
Identity = 79/213 (37.09%), Postives = 114/213 (53.52%), Query Frame = 0
Query:  146 AAAVKKTP----------EQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEE--KDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPD 346
            A+  KK+P          E AV DYMR+TNRPYS++N+F+N+HR I +  +  +LD L    EL+SK YGKA IYY NQ+ L     E + LA EE  K ++A             +  A++ +Q +D  L+  L  L       ++++  +     A   P      +  F K R  WV RK  A + V++I+DGMEKKPK V+DL+GV+ D
Sbjct:    1 ASGAKKSPAVKPMKAADAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTTLLDNLTAKEELVSKTYGKAKIYYMNQSNLPVP-SEAERLALEEQIKVVTADCVASEQELKSAEATLASIKSQLSDADLDAALKQLDEEAATLEKKMETLDQPGRAPVSPGRKEALKRKFTKYRTAWVSRKRIAMDGVNQIADGMEKKPKAVLDLVGVETD 212          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A484DZL4_BRELC (Homologous-pairing protein 2 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZL4_BRELC)

HSP 1 Score: 122 bits (307), Expect = 1.210e-28
Identity = 75/196 (38.27%), Postives = 111/196 (56.63%), Query Frame = 0
Query:  154 EQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGEL-QALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDAD 348
            E AV DYMR+TNRPYS++NIF+N+H+ I +  + ++LD LV   EL+SK YGKA IYY NQ +L     E  + + AE + L+A+            +  AA  AQ +D  LE  L          + ++A +         P A +  + +F K R  WV RK  A + +++I+DGMEKKPK +++L+GV+ D D
Sbjct:   98 ETAVLDYMRKTNRPYSLLNIFENMHKGIAKPTLTRMLDNLVVKQELVSKTYGKATIYYLNQNKLPIPSEEEHKTIEAEIQTLTAECATYEQELKSAKATLAATMAQLSDIDLESALKXXXXXXXXXEAKVASLDKNTCLPVSPGAKNTLKRNFIKYRTAWVARKRIAMDGINQIADGMEKKPKAILELVGVETDED 293          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A5D6YA72_9STRA (TBPIP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YA72_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.610e-28
Identity = 90/201 (44.78%), Postives = 119/201 (59.20%), Query Frame = 0
Query:  154 EQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAALA---AQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVV 351
            + AV DYMR+TNRPYS++N+F+N+HR I +  + KILD L    EL  K YGKA IYY NQ +L A   E +A  + E+ ++A XXXXXXXXXXXX    ALA   +Q +D  LE  L +L +   A + RLA +         P      +  F K R  WV RK    + V++++DGMEKKPK V DL G++ D D  V
Sbjct:  135 KSAVLDYMRKTNRPYSLLNVFENMHRAIAKPALTKILDDLCDKDELAGKTYGKAKIYYANQNKLPAPSEEERA--SVEQQIAAAXXXXXXXXXXXXXXXXALAGINSQMSDAELEAALASLADECSALETRLATLEQPDRKPVSPGRKDTLKRQFTKYRTAWVQRKRIVVDAVNQVADGMEKKPKAVYDLCGIETDEDAGV 333          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: D0NIU5_PHYIT (Pairing protein 2 family protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NIU5_PHYIT)

HSP 1 Score: 121 bits (304), Expect = 4.060e-28
Identity = 76/195 (38.97%), Postives = 110/195 (56.41%), Query Frame = 0
Query:  154 EQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEE--KDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPD 346
            E AV DYMR+TNRPYS++N+F+N+HR I +  + K LD LV   EL SK YGKA IYY NQ  L     E + LA EE  K ++A+            +  + +++Q +D   +  L  L++   A + ++  +     A   P   +  +  F K R  WV RK  A + V++I+DGMEKKPK V+DL+GV+ D
Sbjct:  109 EAAVLDYMRKTNRPYSLLNVFENMHRVIAKPSLTKPLDNLVVKEELASKTYGKAKIYYLNQNNLPVP-SEEERLAIEEQIKTVTAECTASEQELKSAETTLSGISSQISDADFDAALNQLEDEAAALETKVETLDQPGRAPVSPGRKNALKRKFTKYRTAWVQRKRIAMDGVNQIADGMEKKPKAVLDLVGVETD 302          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A6G0XWT6_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWT6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.060e-28
Identity = 78/195 (40.00%), Postives = 105/195 (53.85%), Query Frame = 0
Query:  155 QAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNAAL---AAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPD 346
            + V  Y+RQTNRPYS++N+F+NLHR+I +TM+QKILD LV+ GE+  K YGK+ IYY NQ +L A   EL  LA  E  +                  A L    +Q +D  L   L  L+N   +   +L        A  DP A +     F K R  W+ RK    + VD+I++GMEKK K VM+L GV+ D
Sbjct:  110 EEVAKYLRQTNRPYSVLNVFENLHRRIGKTMLQKILDVLVEQGEINVKTYGKSQIYYYNQRKLPAPSAEL--LAKTEDSIQTVFEEVSALEKTLKEKEAVLNGLTSQMSDAELTAALADLENEASSLSAKLQQANERNTAPVDPGAKAHLTKSFQKYRTEWLKRKRIVMDAVDQIAEGMEKKRKDVMELCGVESD 302          
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Match: A0A024U6Z6_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6Z6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.000e-28
Identity = 79/195 (40.51%), Postives = 106/195 (54.36%), Query Frame = 0
Query:  155 QAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQXXXXXXXXXXXXSDNA---ALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPD 346
            + V  YMRQTNRPYS++N+F+NLHR+I +TM+QKILD LV+ GE+  K YGK+ IYY NQ +L     E  ALA  E  ++A                A    L +Q +D  L   L +L+  N     +L  +        DP A +     F K R  WV RK    + +D+I+DGMEKK K V+DL GV+ D
Sbjct:  120 EEVAKYMRQTNRPYSVLNVFENLHRRIGKTMLQKILDVLVEKGEINVKTYGKSQIYYYNQAKLPRPSPE--ALAHIEDQITAASDEVASLEKELKDHEAILHGLNSQLSDAELSVTLESLEAQNATLQAKLQEMDKRPSVVVDPGAKAALTKSFTKYRTEWVKRKRIVMDAIDQIADGMEKKRKDVLDLCGVETD 312          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348005 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ02_9STRA1.060e-189100.00Tat binding protein 1-interacting protein-domain-c... [more]
D7G4U2_ECTSI1.990e-4344.76Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
A0A6H5JRD1_9PHAE1.800e-4245.45Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
A0A6A3DU84_9STRA1.600e-2940.10TBPIP domain-containing protein n=3 Tax=Phytophtho... [more]
A0A225V1S8_9STRA7.210e-2937.09Pairing protein (Fragment) n=1 Tax=Phytophthora me... [more]
A0A484DZL4_BRELC1.210e-2838.27Homologous-pairing protein 2 homolog n=1 Tax=Bremi... [more]
A0A5D6YA72_9STRA2.610e-2844.78TBPIP domain-containing protein n=1 Tax=Pythium br... [more]
D0NIU5_PHYIT4.060e-2838.97Pairing protein 2 family protein n=2 Tax=Phytophth... [more]
A0A6G0XWT6_9STRA4.060e-2840.00Homologous-pairing protein 2 homolog n=1 Tax=Aphan... [more]
A0A024U6Z6_9STRA7.000e-2840.51Homologous-pairing protein 2 homolog n=1 Tax=Aphan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..281
NoneNo IPR availableCOILSCoilCoilcoord: 224..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..113
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 145..220
e-value: 2.2E-24
score: 87.2
IPR010776Homologous-pairing protein 2, winged helix domainPFAMPF07106TBPIPcoord: 154..213
e-value: 5.5E-23
score: 80.7
IPR040461Homologous-pairing protein 2PANTHERPTHR15938TBP-1 INTERACTING PROTEINcoord: 66..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:297104..303950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348005mRNA_1269Tribonema minus UTEX_B_3156 mRNAContig_18 296914..303950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348005|estExt_Genemark1.C_Ctg_180032 ID=Trimin1|348005|estExt_Genemark1.C_Ctg_180032|Name=jgi.p|Trimin1|348005|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=371bp
MGGSSDESDAFVDEESEDAVVSSAGDESDDSDDFEDEKPKKKAPAKTPAK
AKPKASTPKQKKASAKATAAAAAPKTTVSRGTPPMAEAKPAAARKRAAPS
ADGNSATKKPATASRAGASAGAVSAAAVPTAAAAAAAAAPAADPAAAAVK
KTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELL
SKEYGKAVIYYCNQTRLEADLGELQALAAEEKDLSAQLQRLQQQLQQMQS
DNAALAAQPADDALEEELTALQNANDAEDQRLAGIRGAQGAGADPAAMSK
ARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTV
VPPKMSLGEPDSQHPAHARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR010776Hop2_WH_dom
IPR040461Hop2