Trimin1|347924|estExt_Genemark1.C_Ctg_170077 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347924
Unique NameTrimin1|347924|estExt_Genemark1.C_Ctg_170077
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length83
Homology
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A835Z7M5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.600e-46
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MGGDDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCILAAAGVAAAVFLQ 82
            MGGDDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCILAAAGVAAAVFLQ
Sbjct:    1 MGGDDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCILAAAGVAAAVFLQ 82          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A8K1FGD4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGD4_PYTOL)

HSP 1 Score: 58.9 bits (141), Expect = 9.260e-10
Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCILAAA 73
            DDG +ASELRQRY RGG  +DS+LSAAQLRARY I      G   K   +SS    I   V+ V +LA A
Sbjct:    3 DDGMTASELRQRYERGGLVRDSDLSAAQLRARYAIP-----GNTFKEDPSSSNMMMIVGAVVAVVVLAGA 67          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A0P1AF08_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AF08_PLAHL)

HSP 1 Score: 58.2 bits (139), Expect = 1.770e-9
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCI 69
            DDG SAS+LRQRY RGG+ +D +LSAAQLR+RY IA        +K  A+S+    +A +V+LV +
Sbjct:    2 DDGLSASDLRQRYERGGSVRDCDLSAAQLRSRYAIAGNTF----EKQQADSNATIIVAVIVVLVIL 63          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A2D4BS94_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS94_PYTIN)

HSP 1 Score: 58.2 bits (139), Expect = 1.860e-9
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIAN---KPD 43
            DDG++ASELRQRY RGG+ +D +LSAAQLRARY I N   KPD
Sbjct:    3 DDGYTASELRQRYERGGSVQDCDLSAAQLRARYAIPNNTFKPD 45          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A0G4H4G1_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4G1_VITBC)

HSP 1 Score: 56.2 bits (134), Expect = 1.170e-8
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVIL 66
            DDG SASELR+RY  GG+A DSELSAAQLRAR+ + N+ +   D  GG      + IA +V L
Sbjct:    3 DDGLSASELRRRYGPGGSAPDSELSAAQLRARHNVQNR-EFRADDGGGVLMYVVAGIALIVFL 64          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A2P4WVY7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVY7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 8.650e-8
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCIL 70
            DDG +ASELRQRY RGG+ +D +LSAAQLR+RY I           G      QS    MVI+  ++
Sbjct:    2 DDGMTASELRQRYERGGSVRDCDLSAAQLRSRYAI----------PGNTFKEKQSDTNAMVIIAAVV 58          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A225X142_9STRA (Microfibrillar-associated protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X142_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.030e-7
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKGGANSSGQSSIATMVILVCIL 70
            DDG +ASELRQRY RGG+ +DS+LSAAQLR+RY I         K+  ++S+    IA +V+L  I+
Sbjct:    2 DDGMTASELRQRYERGGSVRDSDLSAAQLRSRYAIPGNTF----KEKQSDSNTMMIIAAIVVLTSIM 64          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A1W0A1W3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1W3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.700e-7
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGI 38
            DDG++A+ELR RY RGGT  DS+LSAAQLR+RY I
Sbjct:    3 DDGYTATELRSRYGRGGTVGDSDLSAAQLRSRYSI 37          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: A0A485LRJ3_9STRA (Aste57867_24848 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LRJ3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.740e-7
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    3 GDDGFSASELRQRYSRGGTAKDSELSAAQLRARYGI 38
            GDDG +ASELR RY RGG+ +D +LSAAQLR+RY I
Sbjct:    2 GDDGMTASELRSRYGRGGSVRDCDLSAAQLRSRYAI 37          
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Match: W2LD83_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2LD83_PHYPR)

HSP 1 Score: 52.0 bits (123), Expect = 4.940e-7
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    4 DDGFSASELRQRYSRGGTAKDSELSAAQLRARYGI 38
            DDG SASELRQRY RGG+ +DS+LSAAQ  +RY I
Sbjct:    2 DDGMSASELRQRYERGGSVRDSDLSAAQXXSRYAI 36          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347924 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A835Z7M5_9STRA1.600e-46100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1FGD4_PYTOL9.260e-1052.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AF08_PLAHL1.770e-950.00Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A2D4BS94_PYTIN1.860e-969.77Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A0G4H4G1_VITBC1.170e-853.97Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2P4WVY7_9STRA8.650e-846.27Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A225X142_9STRA1.030e-749.25Microfibrillar-associated protein 1 n=1 Tax=Phytop... [more]
A0A1W0A1W3_9STRA1.700e-771.43Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A485LRJ3_9STRA1.740e-769.44Aste57867_24848 protein n=2 Tax=Aphanomyces TaxID=... [more]
W2LD83_PHYPR4.940e-771.43Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:579337..580014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347924mRNA_3388Tribonema minus UTEX_B_3156 mRNAContig_17 579130..580014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347924|estExt_Genemark1.C_Ctg_170077 ID=Trimin1|347924|estExt_Genemark1.C_Ctg_170077|Name=jgi.p|Trimin1|347924|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=83bp
MGGDDGFSASELRQRYSRGGTAKDSELSAAQLRARYGIANKPDVGMDKKG
GANSSGQSSIATMVILVCILAAAGVAAAVFLQ*
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