mRNA_17002 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353542
Unique Name	mRNA_17002
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353542 vs. uniprot
Match: A0A835Z8T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T3_9STRA)

HSP 1 Score: 1048 bits (2709), Expect = 0.000e+0
Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 2

Query:  125 MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPARLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVVLKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDSLSDARQQLDAALNDVEAAKAQAAAALASVGXXXXXXXXXXXXXXXXCAPRAANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHLPAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEHGTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELAANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGPAAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAAGKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAPDDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRASLEAAARAVPASCQLDSTHVSRVSYLFM 1858
            MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPARLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVVLKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDSLSDARQQLDAALNDVEAAKAQAAAALASVGXXXXXXXXXXXXXXXXCAPRAANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHLPAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEHGTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELAANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGPAAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAAGKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAPDDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRASLEAAARAVPASCQLDSTHVSRVSYLFM
Sbjct:    1 MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPARLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVVLKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDSLSDARQQLDAALNDVEAAKAQAAAALASVGXXXXXXXXXXXXXXXXCAPRAANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHLPAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEHGTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELAANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGPAAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAAGKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAPDDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRASLEAAARAVPASCQLDSTHVSRVSYLFM 578

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353542 vs. uniprot

BLAST of jgi.p|Trimin1|353542 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z8T3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_169	contig	Contig_169:63959..76121 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353542\|estExt_Genemark1.C_Ctg_1690007
Hectar predicted targeting category	other localisation
Ec32 ortholog description	S-adenosyl-L-methionine-dependent methyltransferase
Ec32 ortholog	Ec-12_001390.1
TranscriptId	353864
Track	FilteredModels1
ProteinId	353542

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353542	gene_17002	Tribonema minus UTEX_B_3156	gene	Contig_169 63959..76121 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353542	Trimin1\|353542\|estExt_Genemark1.C_Ctg_1690007	Tribonema minus UTEX_B_3156	polypeptide	Contig_169 64161..75997 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17002_14	exon_17002_14	Tribonema minus UTEX_B_3156	exon	Contig_169 63959..64433 -
exon_17002_13	exon_17002_13	Tribonema minus UTEX_B_3156	exon	Contig_169 65225..65266 -
exon_17002_12	exon_17002_12	Tribonema minus UTEX_B_3156	exon	Contig_169 65744..65844 -
exon_17002_11	exon_17002_11	Tribonema minus UTEX_B_3156	exon	Contig_169 66967..67189 -
exon_17002_10	exon_17002_10	Tribonema minus UTEX_B_3156	exon	Contig_169 68474..68530 -
exon_17002_9	exon_17002_9	Tribonema minus UTEX_B_3156	exon	Contig_169 69004..69102 -
exon_17002_8	exon_17002_8	Tribonema minus UTEX_B_3156	exon	Contig_169 69815..69914 -
exon_17002_7	exon_17002_7	Tribonema minus UTEX_B_3156	exon	Contig_169 70618..70682 -
exon_17002_6	exon_17002_6	Tribonema minus UTEX_B_3156	exon	Contig_169 71112..71180 -
exon_17002_5	exon_17002_5	Tribonema minus UTEX_B_3156	exon	Contig_169 71271..71540 -
exon_17002_4	exon_17002_4	Tribonema minus UTEX_B_3156	exon	Contig_169 73438..73478 -
exon_17002_3	exon_17002_3	Tribonema minus UTEX_B_3156	exon	Contig_169 74121..74376 -
exon_17002_2	exon_17002_2	Tribonema minus UTEX_B_3156	exon	Contig_169 74901..75007 -
exon_17002_1	exon_17002_1	Tribonema minus UTEX_B_3156	exon	Contig_169 75964..76121 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17002	UTR3_17002	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_169 63959..64160 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17002	CDS_17002	Tribonema minus UTEX_B_3156	CDS	Contig_169 75964..75997 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_17002	UTR5_17002	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_169 75998..76121 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_169:63959..76121-
coding sequence from alignment at Contig_169:63959..76121-

spliced messenger RNA

>mRNA_17002 ID=mRNA_17002|Name=jgi.p|Trimin1|353542|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2063bp|location=Sequence derived from alignment at Contig_169:63959..76121- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCGTCAGTGAGCAATGGCATGGCCCCTGGCTCCAATGGGATTGCGGCGAC
TAATCACACTGAACTGCCTCCACCTCCCCGGGCATCTGTAGCCGCAGCAG
CACCTGGGACCTCAGGCCAAGAGCATGGAGCAGCAGGCGGACTTGCAGAT
GGCGCCTGGCTTCAAGTCCATAACATGCATTGAGAGCAGCGAGGCAGCGG
CCGCGGCAACGGAGGCAGTCGTGTCTCAAGCCCACGTGGAACGCAGCATA
CAAGCCTTTCCCATGGATCCGGCAAGGCTGGAGTTCGGGGCAAACGCGTT
CGCAGCGGCCGTTGACTGCGACGTGTACCAATCCGTCCTTAAGGGAGGCT
CATGTGACAAAGTCGCGTTGAAACGGTGCTCGGAGGTGATGCGAGTAGTG
CACAAAGACGGGCGCCTGGTGGTGCTGAAGGCGGCGATGGATGGGGGGGG
AGCGTGCATGGGCAGTGCTGATGTGGCAGCCTACTTTGGGGTTGAGGCGG
CGTTGGCAGATGCAAGAGAAGTCCTTGTTGATCTGAGGGACCTGACGGCC
ACTATTTTGCAGTTGCAGGACTCGCTGAGCGATGCGCGGCAGCAGCTGGA
CGCAGCGCTCAACGATGTGGAGGCGGCCAAAGCGCAAGCCGCCGCGGCGC
TCGCCAGCGTAGGGGACGTAGAGGCGAAGCGCGAGGCTGCCGCTAGCGCA
CTCATGTCGCTGTGCGCGCCACGCGCTGCCAACGGCACTGCAGTTGCAGC
CACTGTTGCCGGTGACAGCGCACCTGCATTTCCTGAAGCCACAATGGAGG
CCACGGAGGTTGCTGCGGAGGCACCAGTGCTGGGGGCAGAGGCAGCGGCA
GGGGAGCGACTGCCCACGCACCTGCCCGCGGCATGGCTGCTTGAGCAGCA
GGTGAACATCGGTGCATATCAAGTGTTCTTGACCCTGCCGCCACAATGGA
AGGCGCTGAGTGCCAAGGCATTCAAGGTGGCAGATGAGTGCTTTGGCACA
ACAGCCGTGTGCATGGATGAGCACGGAACCAAGCAAGGCATACGCAAGTA
CTTCTACATGGCCAAGGGCTTCAACGCAGACGCCGCGTCTATCACCATCA
GGGATGACTGTGTTGTGGTGCGCGTGCCCTACAGCGTGCCAACTCCTGGC
AGCATTGCCGCGCAGGAGCTGGCCGCCAATGAGGAGGCCGCGCACGCCTG
TGATGACGATGCCGCAAAGCAGGTGTCGTTTGCGCGCAAAGGCCTCTGCC
TTGTGGGGCAGACCTTCCTGCTCCTGCATGCTGATGACTGCCACGCAGCA
GCCACGTTCAGCAGCAAGGGGCCCGCAGCGCCTCTCCCCATTGCTTCGGA
AGCGACGCTTGGAGGCCAGTCACTGGAGAGCATCAGTTGTGCTAGGTGTG
ACGCTCCGCTGGGTGCGCAGACTTCAACAGGCAGCAGCGCTCCAGACATC
AACGCAGCAGCCAATGCAGCAGCAGGGAAAGATACCGTGTTTGCGGGGTT
CACAGCGCGGGACTACTTGGCATGCGAGCTGTGCAGAGCTGCAGAGGTGG
CGCTCGATGTCGACTACCCTGCACGGCCAGCAATCAAGCTGCTCTTCGCC
GAGGAGCACCCAGCCGCAGCCCCCGATGATACCACAGCACAGTGCTCAGG
CAGCTGCTCAGGTGATCACGATCACGCAGCGCACGACGCCACGGAGCCCG
CCGAAGACGAGGCATCGCAAGTGCAGCAGCAGATGCTGTCCGTGTGCCCG
GACGAGTATGCGGACATCAGAGCTTCCTTGGAGGCTGCCGCGCGCGCGGT
GCCCGCAAGCTGCCAGCTTGATAGCACCCACGTCAGCCGAGTGTCGTACC
TCTTCATGTAGCGTGTCCACATGCGGCGATGGGAATTGCACGGCGCTTCA
GTGGCTCTTTCTGTGTTTTGTGTGCTGAGGGGGCTGCACTCAAACTTGAC
TTCGAAGGCTGTGCATCGTTGAGACGTGGTGCACGGATCGGATCCTCGAG
CACATTCTGTGCTCTGGGCACGGTCTTGTTTGCATCAACCACAGCCTGGT
CATACTTCATCTT

protein sequence of jgi.p|Trimin1|353542

>Trimin1|353542|estExt_Genemark1.C_Ctg_1690007 ID=Trimin1|353542|estExt_Genemark1.C_Ctg_1690007|Name=jgi.p|Trimin1|353542|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=579bp
MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPA
RLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVV
LKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDS
LSDARQQLDAALNDVEAAKAQAAAALASVGDVEAKREAAASALMSLCAPR
AANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHL
PAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEH
GTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELA
ANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGP
AAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAA
GKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAP
DDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRA
SLEAAARAVPASCQLDSTHVSRVSYLFM*

mRNA from alignment at Contig_169:63959..76121-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17002 ID=mRNA_17002|Name=jgi.p|Trimin1|353542|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12163bp|location=Sequence derived from alignment at Contig_169:63959..76121- (Tribonema minus UTEX_B_3156 )
CCGTCAGTGAGCAATGGCATGGCCCCTGGCTCCAATGGGATTGCGGCGAC
TAATCACACTGAACTGCCTCCACCTCCCCGGGCATCTGTAGCCGCAGCAG
CACCTGGGACCTCAGGCCAAGAGCATGGAGCAGCAGGCGGACTTGCAGAT
GGCGCCTGGTCGGGGGGGACTTGGAGCGTTATCAAGGAGGCCCTAGCAGG
GGTACAGGACAAGGGGCAAGGATTGCTGGTGGTGGGGAGCGGCGGCGGCG
GCGCAGCTGTGCAGGTGGCGCTTGCATTGGCACATGATGGTGAGACACGT
CATACTGCACATAGGTGCTCCCGAACTGCATGAAGTTCTCAAACTTCTTC
TCTGCGAGCGGCTCCAGCGTGTTGTACAGGATGTAGGCATGGCACGCTGC
ACAGGGGAGCGGCAGTTGTTGAAGTTCAAGTGGTGAGGTTGGAGCATTTC
ACGCACAATGCCACAGTGACATCACGTTGCATCACGCACACGAGCTAGCA
CCATGAACTACTGGCGCACTTTAAAGTCCCGCAGGAAGCAAATTAACGCA
TTCATTTTTGTCAAGAATGGCATACGCTGCCATGGCGCATGCTGCTGTTT
CTGTGAAGCTGACTCTGGCGAGCCGACTCTGGCGGTCATGTTGCGTGTCA
CCTGGCCCCTTGCATAGGGGTTCAAGAGCGGATGATGGATGTGCGCGCTG
GTGTTAAAGCACACCGGCTCCATGCCCAGCAATTGACATGCAGCATTTTC
CGTTTGAACGGTGCATTTGCTTGCCAGTTGTTCTGTATGCAGCCAGGAGT
GCATGGCTCATTGCTTGACCAAAGTCGAGTCCGACAATCGCAGTAGTTCA
AACGGTACTGTACACACTCAGCTAGCCGATCTCTTGCTAGGTGCAAGCAG
TCATGCGGCAAGTGCTGATATTTGCCTCATGCCGCTGAGTCACAAGTCCT
GATACATGCTTGATGTAGGAATTCACAGTTCCCGCACTGTCACATGCGAT
GATCTTGAGCATGCAAATCCGCAGCGGCAGCGCTGTCGGTCGGCAGTGCC
CTCCTTCATCGATCGTAACTGTCCAAACTGTTACTGACATGTCGTCTGTG
TTCATGCTGTTCAGGCTTCAAGTCCATAACATGCATTGAGAGCAGCGAGG
CAGCGGCCGCGGCAACGGAGGCAGTCGTGTCTCAAGCCCACGTGGAACGC
AGCATACAAGCCTTTCCCATGGTAAGACATGACAGCACGCAACATTGTGC
GAGCCACTACAACACATATGTAGCTGCATCAATCAGCATACGCTGTGGTG
CATGGAAGCCATGTTGCAGGATCCACAGCACCGCTCAGCATTGCAGCTGC
GGTGCATGTGAAGGCAGAGAACATGCGCGCATCAAGGCACTGAAGCCATG
GCATCGGCATGGACCACAGTTGGTGCATCATTGGCAAGCATTGGACACTC
TGATGAGTAGGTAGCACTGTGCAGCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCAATAGGAGGTGTTTATGGATGGGGTAGGCGTGTCATGTGTG
TGCTGTGTTGAACGCTGTTGTCATATCAACGCAGCTACTGCAGCACCTAA
TGGCATAGCGCGGGCTTCGTCGCTCCTGAAAATGCACTCGCTGCTTTGGA
ACATTAACTGCGCGTGCAGCGCAGCTCAGCTGACATACAAGCAGTAACCC
ACAGTCGACCTGACCGTATGCATCGTGCGTGCCCTTTTCTCCCAGGATCC
GGCAAGGCTGGAGTTCGGGGCAAACGCGTTCGCAGCGGCCGTTGACTGCG
ACGTGTACCAATCCGTCCTTAAGGGAGGCTCATGTGACAAAGTCGCGTTG
AAACGGTGCTCGGAGGTGATGCGAGTAGTGCACAAAGACGGGCGCCTGGT
GGTGCTGAAGGCGGCGATGGATGGGGGGGGAGCGTGCATGGGCAGTGCTG
ATGTGGCAGCCTACTTTGGGGTTGAGGCGGCGTTGGCAGATGCAAGAGAA
GGTAAGTTGTGAGCAAGGTTCATGTGCGCGTTGTTGTTGCTTCATGACAT
GTACAAGCTGGAGAGGTCGTAATGAGATGCTCTTACATCACGCAGTCAAG
GGCAATTCAGATGTACGCCACAGTATGAAGTCTGAATCTTCCTTCTGTGT
GACCAACCATACATGCATGTATGCCTGTGTTCATTGTGGTGAGACTGCGC
GCCATGCGCATTTGCATCTGACTCTTCTGCCATGTCACCTATGACGTGTG
ACGTGCTATGCCACTTAAACAGCCAGCTTGAGAGCAGGTCACGACATTTG
TTGCCCATTCCTGACTTCTTGTGTTTGCGTGTTTGATGAGCCTCTGGCCT
CTTCGTTCAATCAAGCCTTGTAGTAGCCAACGAGTGGTATTTGCAGCACA
CTTTCTACAAGTCAATGATGAGCTGCACTTCATCAGCAGTGCTCAAATCG
TATGGGAGAATGTCCGCGTCTCTGGAATAAAGCAGGCGGGGATGTGGCGT
CTGCTAATTATATGTGCGCACACATGCAGCTGGCAAAGCTCTTGCTGGCA
ATTCAGCGGTGCTGCATTCGGAGCAATGACAAATGCATACTTCAAGTACA
TTGTTTCATGCAAATGTGGGCCTGTTCTGCTGCGAAAAGTCAGTCCTTGT
TGATCTGAGGGACCTGACGGCCACTATTTTGCAGGTGCATACACACTGAC
CAAGCCCAGTTGTTGGCGGCCCCTGTCAGCCAAGTTGGGCGCATATCCAA
ACATACCGCCACCACAGCTCACTTCGGCACCAGCCAGTTTCGTAGGGGAC
AGCGCTACGGTACGCCAACAGCACATGATGGAAGCATATGACCATAATTT
GCTATAGTCTCGAAATGGCTAAGACAAAGCTTAAGCGATTGTGCTTGAAG
TTGCCATGCCTGCCAGGTTTTGTTGGATGGCGCCTGATTCCAAATGTGAC
ATTTGCTGTCTTAAATTACGAGAGACGCTTGCTATTGCGTTGCGGCTTCA
ATGAATGATCCTACCCCATTTGAACCTAACAGTTGAGTTCTGAGCATCTG
TCAGCAGTGTTGTTAATGACGTACGTACGGGGGAGTACGTACGCACAAGG
TAACAGGGGAGTACATAGGATTCTCAGAGTGTTACCGTGTTACCGACTAA
CCCTACCATTAGGGTTAGCTAGAGTTAGCCAACCTTAGCTAGGGTTAACC
AACCCTAGCCCTAACGTTAACTCCGAACCCCTAGTCCTTCTACCATCAAC
CATATGCCATGTCCTACTTGTTCTGTCTTATGTCCTCTGATGCTCATGCT
GGGACCGCCTATTGACGTGCAGACTGTGTAGTACTAGACTAAGTACGGTA
GTACGGTAGAACCTCATGCATTAGCCATTGGGCTTGTGTTTGCCGTAAAC
TGTGGTACTACTAGCTTGCTCGTTTTGCCTTGCCGGCAGCAGCTACACGT
ACAGCCTGTCCTGCTCTCTGCGACATCCTGCGCTTCTTGGTGGCTGATGC
CACTGCGTCGTTGATGCGTTTGCTTATCGGGCACTCGTGCGAGAGCACGG
TGCACAAGAAGCCGTGATAGCTGATGACCACCAGGTGTACACTGTAAAGT
CGCAGCATTGCGCTGCCACTTGGAGCCCTCGTCGCTAGCTACACGGGGCT
GCTGCCACAGCGGCCTCTTTTTGCTCGTTGCATTGCACCGCGGAGTCAAA
TCCAGCGAAAAGTCATCAGAACAGTTGAAGTTCAACCCCACATAGTAACT
TCAGCATGAGCCAAACCCTAAACGCTAGCCGGTCATAACGCACCGTAATA
GAATTCCGGCTGTTACCGCGTACGCACGTACGTACATACCCAAAAGTGCC
GGTATTGACAACGCTGTCTGTCAGCCTTGCGGTTAGCACGAAGCTTAAGC
ACTGCTCAGCACATCTCTGGCAATGACCAGCAGCTTGAGTCACATTCATC
ATTTTGGTCATTAGTGGTCGGGGATCCTTGCGATGGTGCTGATATTGCAT
CCCATCACTGCGGTCGGCTGCATATCAGTGGCTACATTGCGCAATTGGTG
ACAGTCCACCACTGCCTTTCAGGTGTCATAGAGCTTGTGCTACTATGTCA
CATTCATGCTACTGAGTGCATTTGTCATGGATGCTACTGTGACCGAGCGA
CATTGCGTCTTTGCCGCACAACACGACATGGTCTTGCAATCATTCCAGAC
ATTGCGCTGCAGCGCAAAGGGTGCTGCACTTTATGCTTGTGTCTGGTCAA
CGCGTTTCAAATATACTTTGTACGTAGGTATGCTACAGCCTTACATATCG
TGCGCCGCGCTGCAAACGCCGCTGCACTTGCAACACGTCCCTATAATGTT
TTGCATGCTGTTGTGCACTACTATTTCTTGTCCAGCTCTGAGTGCAGCTT
TGCAGCCGCTGCACTCAGCGTCAGCAAGTCGCTTATTGCCTCAGGCGCTG
CAGGGCTTGTGAGAAGAATGGCCCATATCGCATATTGCATGAGCTTGAAT
GTCTCAGAAGTAGAACAAGGATTCAGTCATTGCATTGCAAGACACAACTT
TCTGAGCCCTGTGTTTGCCTTCATGTCACAGTTGCAGGACTCGCTGAGCG
ATGCGCGGCAGCAGCTGGACGCAGCGCTCAACGATGTGGAGGCGGCCAAA
GCGCAAGCCGCCGCGGCGCTCGCCAGCGTAGGGGACGTAGAGGCGAAGCG
CGAGGCTGCCGCTAGCGCACTCATGTCGCTGTGCGCGCCACGCGCTGCCA
ACGGCACTGCAGTTGCAGCCACTGTTGCCGGTGACAGCGCACCTGCATTT
CCTGAAGCCACAATGGAGGCCACGGAGGTTGCTGCGGAGGCACCAGTGCT
GGTCCATTCAACTTCAAAAGGTGATGCTGTACCGGGGCAGGCGGGGGTCA
ATGGTGCTACTGCTGTTGCTGCGCACGTTACAAGCAGGCAGGGGGCAGAG
GCAGCGGCAGGGGAGCGACTGCCCACGCACCTGCCCGCGGCATGGCTGCT
TGAGCAGCAGGTGAAGTACCAACAAACCTGTTTTTATCTTTGTATCACTG
CACACGTTTCCCTGTTCAGTGCTTTGTTACTGCAGATTGGAACGTGTATG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGATTGTGTATGTGTGCGCGCGTG
TTGGGCTGTTGGCTATGTCAACAGCATGAATAGTCATATTTGCTCGCTTC
TTGCTCAGAAACCTCTCGTGGTCACAAGTCAACACATCCATGACGCGGCA
TGCATGTATATGCAGTAAAGCAAGTGCGCACCACAGCATCATCTCATTTT
GCCGGCACTTCCAGGATCTCGTGTTCAGCCCCTCAACTAACATTGTGCGC
AACATTCAGTTAAAGCTGGTCTCTTCATCTGTCGCTCTCCACCACCATCA
AGTAAGCTAGCTTATCTCCGCCTGTCGTCGCGCAAACAGGTGAACATCGG
TGCATATCAAGTGTTCTTGACCCTGCCGCCACAATGGAAGGCGCTGAGTG
CCAAGTGAGTGCATTCGAGTAATTGGCAGTTGCTGTGCTTATTCCAAGCT
CATTGCCATGCTTCGGTGATGCTGCACTGGCCGTAAATGTTACATCTGCT
TGGTGCGTGTCCACGGTTGCACTTCAACGCAGAACACAGCGCAGCTTCCA
ATGCTTCAAACGTGTCTATTTGACCAACCATACTGTCTGGGACCAGGTTC
AGGCATGCTGGCTGCGGCATTTGCGATATGGGTGTGGACAAGCAGATGTG
GCAGTGCCCTCATAGGATTACGGGCATTGTCCACTTACTTGCGGTTGCAA
ACACATTAGACATGCCATCTACTGGAGCGATGGGAAGTATGTAGCACACT
GCTGCTTGGTATGACTCGTTGCTGAACAGCTCTGCACTTCAATTTCACTT
CCTTGCTGGCGATCTGGCGCAGCTCTTGGCTGCATGGTATGGTTGGGTTT
ACTGCGCGCACCGATTTGAAACGCCCGTTAAGGTCTGCCTTGTGACAACA
TGAATGTCCATCACATGAATTTCTCTGGTCTCCTTCATTAAAGCCTGTGG
AAGCACTTGGAAAGCGGTTGCAATAACTGATCCTGCATTGAGCGGAAAGT
GGCCATGTACATTTAAGGATAATACCGAAATCTTTCTTGATTGTATGCTG
TTGTTGTGTATGTGAACCTCATGTGCTGTGCTCCCCTGTCCTGTTTCACC
TGAACAGGGCATTCAAGGTGGCAGATGAGTGCTTTGGCACAACAGCCGTG
TGCATGGATGAGCACGGAACCAAGCAAGGCATACGCAAGTACTTCTACAT
GGCCAAGGTGTGTTGTGCAGTGTAAATGGACTGCAAGTGTGGCTGCCTCC
CATATACTCAGCTTTATTGTATTGACTGGTTGTTGTCAAGGGTTAAATGC
TGGAAACAAGTCGTCATGTCCAAGCAGCTGCTGCGCCTGTGCAAGCACGT
TTCTTGTGCATCGTATGCAGGCAGCATTTTTTTTTGCCTCTACAGCTTGA
CAGGCCTGAACATTTGGAGGACATGCTCTCCGGCATGCCTGGCACTCTGA
TGCCTGCATGTGATGTAGCAGTCCCAGCAGCTGGCGGCGTGTGCTGTGCG
TGTATGTACTGTACTGTACTGCTGTACTGTACCTGTACCACTGTCCTGTA
CCTCTGCGTCCTTTTTTTGCTCAGCTGTATGGCTGCTTATATGTCGATGC
GCACGTCCGCTCCCGTTGCTGATGCAATGGCACGCACATGCAGCTCACGC
AACCAAGCGCAACATCTGCCCTTGATTCACGTGGGACTGCGCGCGCCCAA
AGGGTCCTATGCTAGAACTTCAAGTGAACAAGAGCATGGTGTGTGCACAC
AGTATGTTTGGTCACCAACCTGATTCTACCTTGACAGAGCTCCTGGCAAA
ACGCCCTCTGCTTCTTGACTGCTCTTTGCTCCTTCACTCCAGGACTTTTC
ATATGTGCTCCAGTGTAGTGACGTTGCCTCTTATATCAACCCTACTGCTG
ATGCTTACTTTGTGTGCAGGGCTTCAACGCAGACGCCGCGTCTATCACCA
TCAGGGATGACTGTGTTGTGGTGCGCGTGCCCTACAGCGTGCCAACTCCT
GGCAGCATTGCCGCGCAGGTAATCTTTAACGTCCAGCATGAGCCAGCTCC
TCCCTGCAGAGCGCATGCCTGAAGTCATTTTGTCAGAGTCAAAGGTACAA
CAGGAGTGCAGGATGTTTTTCGAAGCCACGGAAGCAGCCTGCGAATGAAA
CAGAGACGCTAGCGAATTTGGTTGTCAGCCTTATTGCCAGTGAAGCTCTT
GCAGACCCTACTGGCTGCGCTGAGCACATGATGTGGGCAAGTTCATATAT
CAGCACAGCTTCGACCACTGGAAGCTTTCCGCACAAACCTCTTGCATGCG
CCATGCTCCATCAGCCTGCACACCACAGTTGGCCACTGTGCGAGTCACAT
GCAGTGGACCGCGCTCCTGTAGCTGAACACCATTCTCACTTGAATGTGTC
AGCCGCGGCGTGCGTCTTTTCCTGAGATGGTACTTATTGTAGCTTTTATA
ATTAGGTCACCCATTTTTGCAAACTTTGCTTTGCTGCGCAGGAGCTGGCC
GCCAATGAGGAGGCCGCGCACGCCTGTGATGACGATGCCGCAAAGCAGGT
TGGTGCATCTGTACTGTTCAACTTGCGTGCTGTCATGAATCTATCTGCGG
CCGTGAGATTGGCCAGCTGTTTGCGCATACATTTCGGCAGTTTTTATGCA
GCTACATGAGGCACACCACACCTCATCAGGCAAGAAACTGGCTGCGCTGC
ATCCCTCAGCATTCTTGCCCTTGTATGGATATCATGAGGCGCTCTACGAG
CTCGTTGTACTAAGTAGGTCTGACACGTCACTTGCTCTTGACCATAGCTG
ACGATGAAGAACGGGTATCATCAAGGTGCAAGGCAGGGCGCGGCAGTTTG
CACCGCTGCTGCATGTAATCGTGCTTCCCAACGCCTCCTTGGTCAAGAGC
GACGTGTCTGTGACCTGATTGTCAAACGATTGTTCAACGGCAGCGGTGGC
AGGTTGAGTTGCATGCCTCTTTGCAGCAGCTTGGGATGCATATTGACCGG
GTGCAATTAGCTTGTGTGCTGTACCTGCACTTGACTGCAGGTGAGGCCCG
TTTGTCACCAGTTCTCGATGCAGCTCTCACCACAATTGCATGCACCATGC
CTTCCCAAAGTCGTCTACTAACCGTGTGGACCTCTGCTCGCAATCCCGTT
CCTCTGCTGCAACCAACTTCAGGTTACGGCTGTTTGGTGCCGGTTTTGTG
GCGCTGCCATCACAAAGGAGTGCTCCCTTCGGCGCGCCCTGCCACTGCCT
TCTGGCCGCTTCGATGATGTGATTGATGAGATGGTGTGCTTCGAGGGACC
CACCGCTGTGCCTATGACAGCACGAGAGGTATGCCGTTTTGACAGATGTT
TGAAGATTGGCCAAAACACAGATTGCCCATTGCTGACCTGTTGTCATTCT
GATGATGCGAGTGTGTGTTGAGGGACCCACATGGTGATCATGACAGTGTA
CGGGGTATGCTTGTGCGATGCGTTCGCTGGGGCAACTGTAACTGCTGTCT
GGTGTTTGTTACAGTTACTTTGGTGCTGCTGATTTATGGGGCATGAGGTA
GTGGAGTGCAAGAGCCTTGTTTCAGGCGAAGCAGCTGCTGTCGACATGTT
CATTTGCATATGTTGGTCTCAGTGACGCACGTACTGTAGCTGCCTCAAGT
ATCTACAGGCGTACATGCTTTGATTGGAATGTATATGCTAGGCGCCTATC
GCATGCGAACATGGCATGCACACGTCTGAGGCCACGCACATCTGCCTGAG
CTACCTACATAAACCGCTTGCGGTCCCAGTAGTGCAATGCTGACACGTTT
CACCCTGCATGCGCTGCTTGCGCGATGTGCAGGTGTCGTTTGCGCGCAAA
GGCCTCTGCCTTGTGGGGCAGACCTTCCTGCTCCTGCATGCTGATGACTG
CCACGCAGCAGCCACGTTCAGCAGCAAGGGGCCCGCAGCGCCTCTCCCCA
TTGCTTCGGAAGCGACGCTTGGAGGCCAGTCACTGGAGAGCATCAGTTGT
GCTAGGTGTGACGCTCCGCTGGGTGCGCAGACTTCAACAGGCAGCAGCGC
TCCAGGTACGCTAGTACGGTGATGGTATAGCAAGCTCTTGGTCATGTATA
GAGGAGTCATACAGACGTGGCTAGTCTATTTCTCAGAGCTTGCAGCTAAC
TTTGCAACGCTGTGATTTTGGTGCATTTTGTGTCAACACTCAAGGGTGCC
TGGCGTCTTGAACACAAGCACCAGTGCACAGTGGTTTGATCAGCTGAGCC
AGCATGGCAGCACACCTGTATGCATACACTGAGTTCATGAAATATATCAC
GGCAATTCCTTGACTCGCCATAGTGCCTGACTTTTTCTGCCGCAGGCCTG
GTGCTTTTGCGGCACAGGGTGACTGGTGAAGCGGCGAAACAGGCATCCGC
TGCTGATGCGCTTAGGGCCCTTGCGGCCAAAGCAGCGCCTCTTGCAGCAG
AAGCAAGTTTGCATTTGGATCCTGACGAGGGCGCTCATCTTGCAGAGCAC
CTCAAAGGTGAGCACTTGAGGCAATGAGAGGTGCCAGGACTCAAAATTGA
GCGCAAAGCATCCGAACTATGAAAAACCGACAGCGTGCGTACAACACTGG
GTGCGACCACTTCATCAGCTCTTTGGAATCGATTGCAATGGTGCCTGTCC
CGAGCAGTGGGTGTTGGTGCCTTGTTGTAGACTTCAAAGTTGTTGTGCCC
TTTGACATTGTCTTCAGAGTGCTGTGCCTGCAGTACTAGAGCTGCGCTTA
GAATCCGCACCGCATCCTCGCAATAATGGACATGCTGAATACTTTTGTTG
TTCATAGAGTTGGTGTGTGTAGTTGCTGGCATCCCTTACCCGCAGTCACT
GAGTTTGCCATCGAGCACTGAATGTTGCTGCAGCGATGCTTGGTGCAATC
ATTTGCAGTGCTCAACACCGAGTGTAGATATTGCTGCAGTGTGCACTGCT
TCGCACTTCTCAGGCTCCAATGCTGTGGCAGATCTGTTTCCTCAGTTCTA
CTTCACTAAATTGTGTGCATGCTGCATCTGGAAGCCTGCTGCACAAGACA
TGAACCAAATGCCATCGCCGCTCTGAGGCTCCTAAGACATCAATAGATTC
TGTAAATTCACGCAATCTCTCAGCCTGCCAGCACGTTTCATGACTTCTGC
TGCCACTGCAACCGTTGGCCGCCTCAGACATCAACGCAGCAGCCAATGCA
GCAGCAGGGAAAGATACCGTGTTTGCGGGGTTCACAGCGCGGGACTACTT
GGCATGCGAGCTGTGCAGAGCTGCAGAGGTACCTCAAACTGCCTTTTACT
CGTAAGCATTGCACAACGTACAATCAGTCACCGTCTGATGATCACTGCAG
TTCTACATGTTTGCGCACATGTTTCTCATTTGCATTCATGCACCTCAACG
TACTTAAGGGTCTATGGCACCCAGCAGGTCATAAAAACACCATGCACTTA
CAACAACCGGCACTAGTAAATTCAACGCTGCAGGAACTGTGCACACCGTT
CAGAAGCTTAATTGATATGTGAGGACAAATAGAACAATATTTAATTGAAT
TTGTAGAAATATGCTTCTGACATACAGCAGCCACGCCACCTGCCAGACTT
TGGACACAAGTTTTTGCCGTGCACTCATTTCGTGCCTTCCTTGCGTGCGA
TCTTGACACCCTCAGGTGGACAGGTGCCATCGCATGGTTGTGCAAGTCGA
AGGGTGGGACACGCATCCCATACTCAGGCTGCGCATTGTGACACTACGCT
GCAAGGTGGCGCTCGATGTCGACTACCCTGCACGGCCAGCAATCAAGGTA
ATGCGGATCATGACTGCCTCGTTGCCAGTGATATTATCTGTCCCATGGAA
ACGAATCAAAAGATCGTAGAGCTCTAGGTGACATGCTGTGATTAGCCGCA
AGTGCCTTTCACCAAAAACCGTGGTCGCCGCTGCTGCAGACATTGGCCAC
GAGTCAAGCAGTGCCATCATATATGGTGTGTGTATCGCCGAAGCTCGCCA
TGAGCAATGAGGGCGTGCTTCACTGTCAGCGTCTGCTGGCCTGAAAATGT
GGTGTTGCTGGCGCGCAAATTTTGGCAAGCCTCGTGGTGAACCAGAGCTC
TAGACTATGCCAATACAACCATGATACCCCTTGGATGTCATATCAGGTCA
AATCCGTCACTGGCAATCCGTGGTTCAATGCACTTACCAAGCTATCCCTG
AAAAGCTATGCGCGCAGCTAATGCCCATCCTGTGGAGGGGACCGAAACAG
CAGCGTACAGTGACGTTCATGCTGGCTAGTAGTATGCACGTATGCACGCC
CCCAAAACTGTTGATCAAGCAAGAAGCCTCTGACTCTTGCAACCTGCTCA
CAGCATAGATGGTGGCCATTGCGGATTCTAACTTCAGCTCAGGGGCACCT
TGAGGTGAATAGCATGGATGCAGAGTAGGTGAGAATACGCAGACAGTTTG
ACGATTCCATTTTTGTGCAAAGTGGATTGTGTATCTAAAAAACACTAGCA
GGGCATCAGGCTCTAACGCCAGCCTGTCAGTGCTCAGCCTGTAGTGAACT
GACCTGCCGTATTCGGCATGCTTACGTTGTTGTGACAGCTGCTCTTCGCC
GAGGAGCACCCAGCCGCAGCCCCCGATGATACCACAGCACAGTGCTCAGG
CAGCTGCTCAGGTGATCACGATCACGCAGCGCACGACGCCACGGAGCCCG
CCGAAGACGAGGCATCGCAAGTGCAGCAGCAGATGCTGTCCGTGTGCCCG
GACGAGTATGCGGACATCAGAGCTTCCTTGGAGGCTGCCGCGCGCGCGGT
GCCCGCAAGCTGCCAGCTTGATAGCACCCACGTCAGCCGAGTGTCGTACC
TCTTCATGTAGCGTGTCCACATGCGGCGATGGGAATTGCACGGCGCTTCA
GTGGCTCTTTCTGTGTTTTGTGTGCTGAGGGGGCTGCACTCAAACTTGAC
TTCGAAGGCTGTGCATCGTTGAGACGTGGTGCACGGATCGGATCCTCGAG
CACATTCTGTGCTCTGGGCACGGTCTTGTTTGCATCAACCACAGCCTGGT
CATACTTCATCTT

Coding sequence (CDS) from alignment at Contig_169:63959..76121-

>mRNA_17002 ID=mRNA_17002|Name=jgi.p|Trimin1|353542|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1737bp|location=Sequence derived from alignment at Contig_169:63959..76121- (Tribonema minus UTEX_B_3156 )
ATGGAGCAGCAGGCGGACTTGCAGATGGCGCCTGGCTTCAAGTCCATAAC
ATGCATTGAGAGCAGCGAGGCAGCGGCCGCGGCAACGGAGGCAGTCGTGT
CTCAAGCCCACGTGGAACGCAGCATACAAGCCTTTCCCATGGATCCGGCA
AGGCTGGAGTTCGGGGCAAACGCGTTCGCAGCGGCCGTTGACTGCGACGT
GTACCAATCCGTCCTTAAGGGAGGCTCATGTGACAAAGTCGCGTTGAAAC
GGTGCTCGGAGGTGATGCGAGTAGTGCACAAAGACGGGCGCCTGGTGGTG
CTGAAGGCGGCGATGGATGGGGGGGGAGCGTGCATGGGCAGTGCTGATGT
GGCAGCCTACTTTGGGGTTGAGGCGGCGTTGGCAGATGCAAGAGAAGTCC
TTGTTGATCTGAGGGACCTGACGGCCACTATTTTGCAGTTGCAGGACTCG
CTGAGCGATGCGCGGCAGCAGCTGGACGCAGCGCTCAACGATGTGGAGGC
GGCCAAAGCGCAAGCCGCCGCGGCGCTCGCCAGCGTAGGGGACGTAGAGG
CGAAGCGCGAGGCTGCCGCTAGCGCACTCATGTCGCTGTGCGCGCCACGC
GCTGCCAACGGCACTGCAGTTGCAGCCACTGTTGCCGGTGACAGCGCACC
TGCATTTCCTGAAGCCACAATGGAGGCCACGGAGGTTGCTGCGGAGGCAC
CAGTGCTGGGGGCAGAGGCAGCGGCAGGGGAGCGACTGCCCACGCACCTG
CCCGCGGCATGGCTGCTTGAGCAGCAGGTGAACATCGGTGCATATCAAGT
GTTCTTGACCCTGCCGCCACAATGGAAGGCGCTGAGTGCCAAGGCATTCA
AGGTGGCAGATGAGTGCTTTGGCACAACAGCCGTGTGCATGGATGAGCAC
GGAACCAAGCAAGGCATACGCAAGTACTTCTACATGGCCAAGGGCTTCAA
CGCAGACGCCGCGTCTATCACCATCAGGGATGACTGTGTTGTGGTGCGCG
TGCCCTACAGCGTGCCAACTCCTGGCAGCATTGCCGCGCAGGAGCTGGCC
GCCAATGAGGAGGCCGCGCACGCCTGTGATGACGATGCCGCAAAGCAGGT
GTCGTTTGCGCGCAAAGGCCTCTGCCTTGTGGGGCAGACCTTCCTGCTCC
TGCATGCTGATGACTGCCACGCAGCAGCCACGTTCAGCAGCAAGGGGCCC
GCAGCGCCTCTCCCCATTGCTTCGGAAGCGACGCTTGGAGGCCAGTCACT
GGAGAGCATCAGTTGTGCTAGGTGTGACGCTCCGCTGGGTGCGCAGACTT
CAACAGGCAGCAGCGCTCCAGACATCAACGCAGCAGCCAATGCAGCAGCA
GGGAAAGATACCGTGTTTGCGGGGTTCACAGCGCGGGACTACTTGGCATG
CGAGCTGTGCAGAGCTGCAGAGGTGGCGCTCGATGTCGACTACCCTGCAC
GGCCAGCAATCAAGCTGCTCTTCGCCGAGGAGCACCCAGCCGCAGCCCCC
GATGATACCACAGCACAGTGCTCAGGCAGCTGCTCAGGTGATCACGATCA
CGCAGCGCACGACGCCACGGAGCCCGCCGAAGACGAGGCATCGCAAGTGC
AGCAGCAGATGCTGTCCGTGTGCCCGGACGAGTATGCGGACATCAGAGCT
TCCTTGGAGGCTGCCGCGCGCGCGGTGCCCGCAAGCTGCCAGCTTGATAG
CACCCACGTCAGCCGAGTGTCGTACCTCTTCATGTAG