Trimin1|353542|estExt_Genemark1.C_Ctg_1690007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353542
Unique NameTrimin1|353542|estExt_Genemark1.C_Ctg_1690007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length579
Homology
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BLAST of jgi.p|Trimin1|353542 vs. uniprot
Match: A0A835Z8T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T3_9STRA)

HSP 1 Score: 1048 bits (2709), Expect = 0.000e+0
Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 0 
Query:    1 MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPARLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVVLKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDSLSDARQQLDAALNDVEAAKAQAAAALASVGXXXXXXXXXXXXXXXXCAPRAANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHLPAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEHGTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELAANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGPAAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAAGKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAPDDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRASLEAAARAVPASCQLDSTHVSRVSYLFM 578
            MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPARLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVVLKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDSLSDARQQLDAALNDVEAAKAQAAAALASVGXXXXXXXXXXXXXXXXCAPRAANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHLPAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEHGTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELAANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGPAAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAAGKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAPDDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRASLEAAARAVPASCQLDSTHVSRVSYLFM
Sbjct:    1 MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPARLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVVLKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDSLSDARQQLDAALNDVEAAKAQAAAALASVGXXXXXXXXXXXXXXXXCAPRAANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHLPAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEHGTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELAANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGPAAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAAGKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAPDDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRASLEAAARAVPASCQLDSTHVSRVSYLFM 578
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353542 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z8T3_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..533
IPR019193Ubiquitin-conjugating enzyme E2-binding proteinPFAMPF09814HECT_2coord: 366..435
e-value: 1.2E-5
score: 24.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_169contigContig_169:64161..75997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353542mRNA_17002Tribonema minus UTEX_B_3156 mRNAContig_169 63959..76121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353542|estExt_Genemark1.C_Ctg_1690007 ID=Trimin1|353542|estExt_Genemark1.C_Ctg_1690007|Name=jgi.p|Trimin1|353542|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=579bp
MEQQADLQMAPGFKSITCIESSEAAAAATEAVVSQAHVERSIQAFPMDPA
RLEFGANAFAAAVDCDVYQSVLKGGSCDKVALKRCSEVMRVVHKDGRLVV
LKAAMDGGGACMGSADVAAYFGVEAALADAREVLVDLRDLTATILQLQDS
LSDARQQLDAALNDVEAAKAQAAAALASVGDVEAKREAAASALMSLCAPR
AANGTAVAATVAGDSAPAFPEATMEATEVAAEAPVLGAEAAAGERLPTHL
PAAWLLEQQVNIGAYQVFLTLPPQWKALSAKAFKVADECFGTTAVCMDEH
GTKQGIRKYFYMAKGFNADAASITIRDDCVVVRVPYSVPTPGSIAAQELA
ANEEAAHACDDDAAKQVSFARKGLCLVGQTFLLLHADDCHAAATFSSKGP
AAPLPIASEATLGGQSLESISCARCDAPLGAQTSTGSSAPDINAAANAAA
GKDTVFAGFTARDYLACELCRAAEVALDVDYPARPAIKLLFAEEHPAAAP
DDTTAQCSGSCSGDHDHAAHDATEPAEDEASQVQQQMLSVCPDEYADIRA
SLEAAARAVPASCQLDSTHVSRVSYLFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019193UBQ-conj_enz_E2-bd_prot