Trimin1|132122|gw1.169.9.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|132122
Unique Name	Trimin1\|132122\|gw1.169.9.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	120

Homology

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A836CIR1_9STRA (CheY-like superfamily protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIR1_9STRA)

HSP 1 Score: 226 bits (576), Expect = 8.730e-75
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVRAL 120
            VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVRAL
Sbjct:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVRAL 120

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A835YLM9_9STRA (CheY-like superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLM9_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.160e-49
Identity = 86/126 (68.25%), Postives = 94/126 (74.60%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAV-------LLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVRA 119
            VLVVDDEGSIRKFL+RML QRGYRVV+ACDG+E LGAMKTC+FHAV       LLDLNMPRMGGLE L  LR WEREQ      R  QYVCV SANC+E V  Q Y +G D FL KPID+  LVR+
Sbjct:   88 VLVVDDEGSIRKFLERMLAQRGYRVVLACDGMEALGAMKTCSFHAVRTTFKQVLLDLNMPRMGGLEALVELRRWEREQPKS---RPLQYVCVISANCSEDVQAQAYSAGTDLFLPKPIDLPMLVRS 210

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A835Z616_9STRA (Response regulatory domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z616_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.310e-32
Identity = 73/124 (58.87%), Postives = 89/124 (71.77%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSA--------QYVCVTSANCAESVVTQVYESGADYFLAKPIDMATL 116
            VLVVDD+ ++R+FL RML  RGY VVVACDG EGL AMK CAF AVLLDLNMPR+ G+E LAALR WE++QXXXXXX           Q+V V SANC+E+   +   +GAD F +KPI + +L
Sbjct:  841 VLVVDDDATLRRFLARMLGTRGYDVVVACDGAEGLEAMKACAFAAVLLDLNMPRLSGIETLAALRAWEKQQXXXXXXXXXXXXXXXXPQFVVVISANCSEAQAAEALSAGADLFHSKPIHLPSL 964

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A836C8G8_9STRA (Response regulatory domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.330e-27
Identity = 73/146 (50.00%), Postives = 87/146 (59.59%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXX---------------------------RSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVRA 119
            VLVVDDE SIRKFL  +L++ GY VV+A DG EGL AM + +FHAVLLDLNMPRMGG+  +AALREWEREQXXXXXX                           +  Q++ V SANC+E+        GAD F  KPI +  L  A
Sbjct:  594 VLVVDDEASIRKFLANLLKKNGYDVVLARDGEEGLQAMCSASFHAVLLDLNMPRMGGMAAMAALREWEREQXXXXXXXXXXXXXXXXXXXXXXXXPHQPGQREPQQPQFIIVVSANCSEAQQEAALAGGADLFHPKPIVVPALAAA 739

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A835Z7I7_9STRA (Response regulatory domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.300e-26
Identity = 60/110 (54.55%), Postives = 73/110 (66.36%), Query Frame = 0

Query:    7 EGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATL 116
            +  +RKFL+R+L +RGYRV+ A DG EGL AMK   + AVLLDLNMPR+GG+ VL  LR WE+ Q         Q+VCV SANCA+        SGAD FLAKPID+  L
Sbjct:  297 QHDLRKFLERILWRRGYRVLQAHDGYEGLAAMKRGIYLAVLLDLNMPRLGGMAVLDQLRRWEQLQPRERH----QFVCVLSANCADRHADDARRSGADMFLAKPIDVPAL 402

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A835ZDP5_9STRA (Histidine kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.330e-19
Identity = 42/45 (93.33%), Postives = 45/45 (100.00%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHA 45
            VLVVDDEGSIRKFLDRML+QRGYRVV+AC+GVEGLGAMKTCAFHA
Sbjct:  742 VLVVDDEGSIRKFLDRMLDQRGYRVVLACNGVEGLGAMKTCAFHA 786

[Close]

BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A835ZAK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.610e-18
Identity = 57/132 (43.18%), Postives = 71/132 (53.79%), Query Frame = 0

Query:    7 EGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHA----------------------VLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATL 116
            E +IRKFL R+LE+RGY VV A DGV+ L AM+ CAF A                      VLLD  MPRM G++ L  LR+ E         R+ QYV V SANC+ +   +   SGAD F AKPI++  L
Sbjct: 1904 ESTIRKFLARVLEKRGYGVVQAGDGVQALEAMRACAFTAHAPHSRRRLSTRKRNAPRCAPQVLLDNYMPRMNGIDTLLRLRQLEARDSA----RTRQYVIVVSANCSAAHEEEALGSGADLFHAKPINVPVL 2031

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A525J5H2_9CAUL (Histidine kinase n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A525J5H2_9CAUL)

HSP 1 Score: 84.3 bits (207), Expect = 1.420e-16
Identity = 51/120 (42.50%), Postives = 66/120 (55.00%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVRAL 120
            VL+VDD    R+ ++ +LE  G   V A DG EG+ AMKT AF AVL+D+ MP M G E    +R+WER        R    + + SANC    V    E+GAD  + KPI  + LV AL
Sbjct:  634 VLIVDDNPVNRQVMELILESVGIGHVSAKDGREGVEAMKTGAFDAVLMDIQMPVMDGFEATRRIRDWERSTH-----RPRAPILMVSANCLPQHVADGREAGADAHINKPISASELVSAL 748

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: A0A537XRA8_9ACTN (Response regulator transcription factor (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537XRA8_9ACTN)

HSP 1 Score: 77.0 bits (188), Expect = 8.680e-16
Identity = 50/123 (40.65%), Postives = 67/123 (54.47%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATL---VRAL 120
            VLVVDDE +IR+ + R L  RG+ V VA DG E LG+++T     ++LDLN+P +GGLEV   +R W           SA  + V S    E+      + GAD +L KP  +  L   VRAL
Sbjct:    6 VLVVDDERAIRRAVSRALASRGFLVDVAADGEEALGSVRTFDPDLMVLDLNLPELGGLEVCRRVRAW-----------SAVPILVLSVREEEADKVAALDLGADDYLTKPFGVDELMARVRAL 117

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BLAST of jgi.p|Trimin1|132122 vs. uniprot
Match: UPI001AE03730 (response regulator n=1 Tax=Brevundimonas sp. AJA228-03 TaxID=2752515 RepID=UPI001AE03730)

HSP 1 Score: 76.6 bits (187), Expect = 1.460e-15
Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 0

Query:    1 VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDLNMPRMGGLEVLAALREWEREQXXXXXXRSAQYVCVTSANCAESVVTQVYESGADYFLAKPIDMATLVR 118
            +LVVDD+ +IR+ +  +L Q G++V+VA  G   L  +K   F  VLLD++MP+M GLEVLAA+++             A  V + +A+   + V +    G   ++AKP   ATLV 
Sbjct:    5 ILVVDDDDNIREVIHAVLTQAGFQVLVAASGEAALALLKRSRFELVLLDVHMPKMSGLEVLAAMKK----------IADATPVLMVTADSQTATVREALSLGCSGYIAKPFTPATLVE 112

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|132122 vs. uniprot

BLAST of jgi.p|Trimin1|132122 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CIR1_9STRA	8.730e-75	100.00	CheY-like superfamily protein (Fragment) n=1 Tax=T...	[more]
A0A835YLM9_9STRA	1.160e-49	68.25	CheY-like superfamily protein n=1 Tax=Tribonema mi...	[more]
A0A835Z616_9STRA	3.310e-32	58.87	Response regulatory domain-containing protein n=1 ...	[more]
A0A836C8G8_9STRA	2.330e-27	50.00	Response regulatory domain-containing protein n=1 ...	[more]
A0A835Z7I7_9STRA	2.300e-26	54.55	Response regulatory domain-containing protein n=1 ...	[more]
A0A835ZDP5_9STRA	7.330e-19	93.33	Histidine kinase domain-containing protein n=1 Tax...	[more]
A0A835ZAK1_9STRA	3.610e-18	43.18	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A525J5H2_9CAUL	1.420e-16	42.50	Histidine kinase n=1 Tax=Phenylobacterium sp. TaxI...	[more]
A0A537XRA8_9ACTN	8.680e-16	40.65	Response regulator transcription factor (Fragment)...	[more]
UPI001AE03730	1.460e-15	36.44	response regulator n=1 Tax=Brevundimonas sp. AJA22...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 1..120 e-value: 1.5E-25 score: 100.8
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 1..119 e-value: 6.3E-23 score: 81.1
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 1..120 score: 33.579613
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..120 e-value: 1.9E-31 score: 111.9
None	No IPR available	PIRSR	PIRSR026389-4	PIRSR026389-4	coord: 1..116 e-value: 1.4E-7 score: 27.9
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 1..118 e-value: 8.7E-17 score: 58.9
None	No IPR available	PANTHER	PTHR44591	STRESS RESPONSE REGULATOR PROTEIN 1	coord: 1..119
None	No IPR available	CDD	cd17546	REC_hyHK_CKI1_RcsC-like	coord: 1..120 e-value: 8.63752E-29 score: 99.0808
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 1..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_169	contig	Contig_169:154496..155426 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|132122	mRNA_17013	Tribonema minus UTEX_B_3156	mRNA	Contig_169 154496..155426 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|132122|gw1.169.9.1 ID=Trimin1|132122|gw1.169.9.1|Name=jgi.p|Trimin1|132122|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=120bp
VLVVDDEGSIRKFLDRMLEQRGYRVVVACDGVEGLGAMKTCAFHAVLLDL
NMPRMGGLEVLAALREWEREQQQQQQQRSAQYVCVTSANCAESVVTQVYE
SGADYFLAKPIDMATLVRAL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily