Trimin1|6649|CE6648_158 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|6649
Unique NameTrimin1|6649|CE6648_158
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length204
Homology
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A836CMP4_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP4_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 2.280e-140
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MQAPGAGSAGRGETVQVAKRKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCIIA 203
            MQAPGAGSAGRGETVQVAKRKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCIIA
Sbjct:    1 MQAPGAGSAGRGETVQVAKRKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCIIA 203          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7S1CXL3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXL3_CYCTE)

HSP 1 Score: 198 bits (503), Expect = 3.340e-61
Identity = 98/187 (52.41%), Postives = 138/187 (73.80%), Query Frame = 0
Query:   16 QVAKRKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCII 202
            Q+  RK+A+LGF  VGK+SL   FV G+F + Y+PTI +T H ++ F K   AT+I+DTAG+D ++++SR+AS+GVHGY +++S +S+ SF+ I ++NE L+H LGD PDV RVLVG+M DLSD+RQ+TTQQ QELA  WGVP++ECS+K   N+  VF  L++E+E+ +G   E E   EG  CII
Sbjct:   11 QLVHRKVAILGFRAVGKSSLTNAFVSGTFAETYDPTIESTHHKTIRFRKVHFATDIVDTAGMDEYSRLSRNASLGVHGYALVFSIVSKQSFDRIVDLNETLLHALGDAPDVPRVLVGSMRDLSDRRQVTTQQAQELAESWGVPYIECSSKTGENVAEVFHTLLREIERDEGLLGENE---EGG-CII 193          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: B8C1N9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1N9_THAPS)

HSP 1 Score: 191 bits (484), Expect = 2.310e-58
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 0
Query:   20 RKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCII 202
            RKIA+LGF  VGKTSL   FV G+F D Y+PTI NT H ++ F K   AT+I+DTAG+D ++ ISR+ASVGVHGY +++S  SR+SFEN+  INE+L++ LGD PDV R+LVG+M DL ++R++ T Q Q+LA  W +P++ECS+K   N+  VF  L+KE+E+  G   E E      KC+I
Sbjct:   12 RKIAVLGFRAVGKTSLTNAFVSGTFSDNYDPTIENTHHKTIRFRKVHFATDIIDTAGMDEYSSISRNASVGVHGYALVFSITSRSSFENVIKINESLLNALGDAPDVPRILVGSMKDLGEEREVNTAQAQKLADGWRIPYLECSSKTGENVVEVFHVLLKEIEKDDGLLNENEE----DKCVI 190          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7S2A5H6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A5H6_TRICV)

HSP 1 Score: 190 bits (483), Expect = 3.170e-58
Identity = 96/183 (52.46%), Postives = 128/183 (69.95%), Query Frame = 0
Query:   20 RKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCII 202
            RK+A+LGF  VGKTSL   FV GSF + Y+PTI NT H ++ F K   AT+I+DTAG+D ++++SR+ASVGVHGY++++S  SR SF+ I  INE L++ LGD PDV RVLVG+M DL+ QRQ++ Q  Q LA  WGVP++ECS+K   N+  VF  LIKE+E+  G   E E       C+I
Sbjct:   11 RKVAVLGFRAVGKTSLTNAFVCGSFAEGYDPTIENTHHKTIRFRKVHFATDIVDTAGMDEYSRLSRNASVGVHGYVLVFSITSRQSFDRISQINEALLYALGDAPDVPRVLVGSMRDLAKQRQVSHQDAQNLAESWGVPYLECSSKTGENVSEVFHTLIKEIEKDDGLLSENEENG----CVI 189          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7S2XWX8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 8.200e-58
Identity = 97/198 (48.99%), Postives = 142/198 (71.72%), Query Frame = 0
Query:   11 RGETVQVAKRKIALLGFTGVGKTSLATRFVQGSFVD------MYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCII 202
            R E ++V  RK+A+LGF  VGKT+LAT+F +GS  +       Y PTI NTF  ++  G+    TEI+DTAG+D ++++SR+ASVGVHGYL+++ST SR+SF+ ++ INE L++ LGD  DV RVLVG+ +DL +QRQ+ +++G  LA EWGVP+ ECSA+ NIN+D VF  +++E+E+  G  +EE+     + CII
Sbjct:    5 RKEPIEV-NRKLAILGFREVGKTTLATQFAEGSSTNGAGVLGEYEPTIENTFRKTITIGRARFNTEIVDTAGMDEYSRLSRNASVGVHGYLLVFSTTSRSSFDKVRLINEVLLNMLGDALDVPRVLVGSKLDLQEQRQVNSEEGASLADEWGVPYWECSARANINVDKVFTAVVQEIEKDSGLLIEEKE----EPCII 197          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7S2RGW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGW3_9STRA)

HSP 1 Score: 189 bits (479), Expect = 4.730e-57
Identity = 93/175 (53.14%), Postives = 128/175 (73.14%), Query Frame = 0
Query:   20 RKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPP 194
            RKIA+LGF  VGKT+L T FV+G FV+ Y+PTI NTF  ++NFGK    TEI+D+AG+D ++++SR+ASVGVHGYL+LY+  SRNSF+ I++I++ L+   G    V RVLVGTM+DLS  R++  ++   LA   G+PF+ECSAKEN+N+  VF  L++E E+  G   EE PP
Sbjct:   53 RKIAVLGFRAVGKTTLTTHFVEGRFVERYDPTIENTFQKTINFGKTQFFTEIVDSAGMDEYSRLSRNASVGVHGYLLLYAINSRNSFDKIQSIDDMLVDMHGGSESVTRVLVGTMIDLSSSREVGYEEAHALADSRGIPFIECSAKENVNVSEVFTTLLRETEKDSGSMEEEAPP 227          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7R9WEL8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEL8_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.190e-56
Identity = 92/173 (53.18%), Postives = 124/173 (71.68%), Query Frame = 0
Query:   20 RKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEE 192
            RK+A+LGF  VGKTSL   FV G+F D Y+PTI NT H ++ F K   AT+I+DTAG+D ++++SR+ASVGVHGY++++S  SR SFE I  INE L++ LGD  DV RVLVG+M DL+ QRQ++ Q    LA  WG+P++ECS+K   N+  VF  LIKE+E+  G   E+E
Sbjct:   11 RKVAVLGFRAVGKTSLTNAFVSGTFGDGYDPTIENTHHKTIRFRKVHFATDIVDTAGMDEYSRLSRNASVGVHGYVLVFSIASRQSFEKITQINEALLNALGDALDVPRVLVGSMRDLAHQRQVSYQDAHSLAESWGIPYLECSSKTGENVSEVFHILIKEIEKDDGLLNEQE 183          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7S2NSH9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSH9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.690e-56
Identity = 93/188 (49.47%), Postives = 129/188 (68.62%), Query Frame = 0
Query:   16 QVAKRKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKCIIA 203
            ++  RK+ALLGF  VGK+SL   FV G+F + Y+PTI NT H  + F K   AT+I+DTAG+D ++++SR+ASVGVHGY++++ST SR SF+ I NINE L++ LGD P V RVLVG+M DL DQRQ+    G ELA   G+P++ECS+K   N+  VF  L++E+E+  G   E E       C+I+
Sbjct:    8 ELVNRKVALLGFAAVGKSSLTNAFVNGTFNERYDPTIENTHHKIIRFRKVHFATDIVDTAGMDDYSRLSRNASVGVHGYVLVFSTASRQSFDRIPNINEALLNALGDAPGVPRVLVGSMRDLVDQRQVPYSDGVELAESLGMPYLECSSKRGENVAEVFHTLLREIEKDDGLLTENEAGG----CVIS 191          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: F0Y9Q3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Q3_AURAN)

HSP 1 Score: 183 bits (465), Expect = 2.040e-55
Identity = 92/176 (52.27%), Postives = 126/176 (71.59%), Query Frame = 0
Query:   19 KRKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPP 194
            +RK+A+LG+  VGKTSLAT FV+G FVD Y+PTI NTF   + F +   ATEI+D AG+D ++++SR+ASVGVHGYL++YS+ SR+SFE I+ IN+ ++   G  P V RVLV TM DL  QRQ+   +G+ LA    +PF+ECSAKEN+N+  VF  LIKE+E+  G   ++  P
Sbjct:   16 QRKVAVLGYRAVGKTSLATHFVKGRFVDEYDPTIENTFAKKIRFKRAHFATEIIDAAGMDEYSRLSRNASVGVHGYLLVYSSTSRSSFEKIRFINDAVLRVQGQSPGVVRVLVATMADLRGQRQVEADEGRALADRMHIPFVECSAKENLNVAEVFTTLIKEIEKDTGFLDDQAQP 191          
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Match: A0A7S2MV59_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2MV59_9STRA)

HSP 1 Score: 182 bits (462), Expect = 5.290e-55
Identity = 91/173 (52.60%), Postives = 124/173 (71.68%), Query Frame = 0
Query:   20 RKIALLGFTGVGKTSLATRFVQGSFVDMYNPTITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYSTISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQELAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEE 192
            RKIA+LGF  VGKTSL   FV G+F + Y+PTI NT H ++ F K   AT+I+DTAG+D ++++SR+ASVGVHGY +++S  SR SF+ I  I+++L++ LGD  DV RVLVG+M DL+DQRQ+  Q  Q LA  WGVP++ECS+K   N+  VF  L+KE+E+  G   E E
Sbjct:   14 RKIAVLGFRAVGKTSLTNAFVSGTFSETYDPTIENTHHKTIRFRKVHFATDIVDTAGMDEYSRLSRNASVGVHGYALVFSIASRQSFDRITQISDSLLNALGDALDVPRVLVGSMRDLADQRQVNHQDAQNLADSWGVPYIECSSKTGENVAEVFHTLLKEIEKDDGLLSETE 186          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|6649 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMP4_9STRA2.280e-140100.00Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A7S1CXL3_CYCTE3.340e-6152.41Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8C1N9_THAPS2.310e-5851.91Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2A5H6_TRICV3.170e-5852.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2XWX8_9STRA8.200e-5848.99Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RGW3_9STRA4.730e-5753.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9WEL8_9STRA4.190e-5653.18Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2NSH9_9STRA8.690e-5649.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0Y9Q3_AURAN2.040e-5552.27Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2MV59_9STRA5.290e-5552.60Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 20..41
score: 41.92
coord: 124..137
score: 39.71
coord: 60..82
score: 27.4
coord: 159..181
score: 37.01
coord: 43..59
score: 29.98
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 17..184
e-value: 9.9E-39
score: 144.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 21..184
e-value: 1.0E-17
score: 74.8
NoneNo IPR availablePANTHERPTHR24070:SF226GTP-BINDING PROTEIN RHEB HOMOLOGcoord: 19..202
NoneNo IPR availablePROSITEPS51420RHOcoord: 13..184
score: 10.155222
NoneNo IPR availablePROSITEPS51419RABcoord: 12..203
score: 19.491985
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 22..184
e-value: 2.9E-9
score: -0.1
IPR001806Small GTPasePFAMPF00071Rascoord: 21..182
e-value: 3.0E-42
score: 144.0
IPR001806Small GTPasePROSITEPS51421RAScoord: 15..203
score: 20.868389
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 18..193
e-value: 3.8E-49
score: 168.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 19..189
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 19..176
e-value: 1.1E-19
score: 68.8
IPR020849Small GTPase, Ras-typePANTHERPTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYcoord: 19..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_109contigContig_109:502740..506243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|6649mRNA_13027Tribonema minus UTEX_B_3156 mRNAContig_109 502683..506344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|6649|CE6648_158 ID=Trimin1|6649|CE6648_158|Name=jgi.p|Trimin1|6649|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=204bp
MQAPGAGSAGRGETVQVAKRKIALLGFTGVGKTSLATRFVQGSFVDMYNP
TITNTFHTSVNFGKKTLATEILDTAGLDGHTQISRHASVGVHGYLMLYST
ISRNSFENIKNINENLMHTLGDLPDVARVLVGTMMDLSDQRQITTQQGQE
LAREWGVPFMECSAKENINIDAVFKCLIKEVEQAQGGTVEEEPPAEGQKC
IIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras-type