Trimin1|54592|CE54591_52 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|54592
Unique NameTrimin1|54592|CE54591_52
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length331
Homology
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BLAST of jgi.p|Trimin1|54592 vs. uniprot
Match: A0A835YXY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY5_9STRA)

HSP 1 Score: 296 bits (759), Expect = 4.490e-96
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVKWESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTKHYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALANLCKA 151
            MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVKWESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTKHYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALANLCKA
Sbjct:    1 MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVKWESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTKHYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALANLCKA 151
[Close]
BLAST of jgi.p|Trimin1|54592 vs. uniprot
Match: A0A835YV42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV42_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.490e-85
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0 
Query:    1 MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVKWESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTKHYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALANLCKA 151
            MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVK ESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTKHYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALA+LCKA
Sbjct:  915 MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVKLESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTKHYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALADLCKA 1065
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|54592 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YXY5_9STRA4.490e-96100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YV42_9STRA1.490e-8598.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 223..256
e-value: 0.0022
score: 27.3
coord: 19..52
e-value: 160.0
score: 4.4
coord: 265..298
e-value: 140.0
score: 4.9
coord: 97..130
e-value: 210.0
score: 3.4
coord: 181..214
e-value: 5.3
score: 16.0
coord: 55..88
e-value: 3.6
score: 16.6
coord: 139..172
e-value: 0.66
score: 19.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 221..292
e-value: 5.9E-16
score: 58.5
coord: 56..129
e-value: 3.0E-9
score: 37.0
coord: 137..210
e-value: 2.5E-16
score: 59.7
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 52..318
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 88..247
e-value: 4.2E-46
score: 159.3
coord: 1..87
e-value: 5.9E-12
score: 47.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 254..321
e-value: 4.0E-7
score: 32.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 50..168
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 133..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:408549..409541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|54592mRNA_59Tribonema minus UTEX_B_3156 mRNAContig_3 408545..409594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|54592|CE54591_52 ID=Trimin1|54592|CE54591_52|Name=jgi.p|Trimin1|54592|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=331bp
MHVLEIRKQMLSPGHAEIVEAIYNVAIMHHALGELVNAECRFREALEVKW
ESQTVKLLTGLGEVLKTKGSFQAAEQCFRSALDAFTQLHMPANRAIMSTK
HYLGILLYRRDQSVEAEMLLREVLEFREKELTKTHRDTAATYDALANLCK
AQGRFAEAEELYQAALDVRVGVLGEWHGDTASTYNNFANLRREQCRFPEA
RDMYEKALRYRLVVLPPNHPETACSYNNMAQCYRDQGDLEEAKRCVEIAL
AIRKKQLDPNNAETASSLDTLADILQAQGNMEQATQRYNNALCMRQTVLG
VNHTLTVESVNKLASHLKRVQECGKSCLIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf