Trimin1|47524|CE47523_459 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A836CGG1_9STRA (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG1_9STRA) HSP 1 Score: 510 bits (1313), Expect = 1.360e-182 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQAASVSQGFRPTGPPPVAGACPPRPCRACPPPASPAQGALLGGQGGCRRQVCPPKACPLEAPLDFPPWACPPQGGGGTPLGRRCKGGGIGSARSVGRNRWGGWRLGRDCCARLCR 258 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQAASVSQGFRPTGPPPVAGACPPRPCRACPPPASPAQGALLGGQGGCRRQVCPPKACPLEAPLDFPPWACPPQGGGGTPLGRRCKGGGIGSARSVGRNRWGGWRLGRDCCARLCR Sbjct: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQAASVSQGFRPTGPPPVAGACPPRPCRACPPPASPAQGALLGGQGGCRRQVCPPKACPLEAPLDFPPWACPPQGGGGTPLGRRCKGGGIGSARSVGRNRWGGWRLGRDCCARLCR 258
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: D7G689_ECTSI (Small nuclear ribonucleoprotein-associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G689_ECTSI) HSP 1 Score: 203 bits (517), Expect = 3.710e-62 Identity = 111/151 (73.51%), Postives = 127/151 (84.11%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHA--HEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQAASVS 149 M+M+RSSKML YVNYRMR+TI+D RVL+GT MAFDRH+N+VLGDCEE+R+ K KKG A A HEEREEKR LGLVL+RGENV SLTVEGPPP E+ G A PGGPGVGRAAGRG+P P GA P GLAGPVRG+GGPA+S+MQPQA + S Sbjct: 1 MSMSRSSKMLQYVNYRMRITILDGRVLVGTLMAFDRHLNLVLGDCEEYRRFKPKKGSEAAAGIHEEREEKRVLGLVLLRGENVQSLTVEGPPPAEDTGKATPGGPGVGRAAGRGVPTMPVQGA-PRGLAGPVRGIGGPASSMMQPQAVAAS 150
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A4D9CW50_9STRA (Small nuclear ribonucleoprotein-associated protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW50_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.100e-59 Identity = 110/163 (67.48%), Postives = 128/163 (78.53%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAH----EEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQAASVSQGFRPTGPPP 159 M+M++SSKML+Y+NYRMRVTI D+R L+GTFMAFDRHMN+VLGDCEE+RK+K+KKG G EE+EEKR LGLVL+RGENVVSLTVEGPPPP+E A PGGPG+GRAAGRG+ + AP GLAGPVRGVGGPA S+M P A GF P G PP Sbjct: 1 MSMSKSSKMLNYINYRMRVTIQDNRTLVGTFMAFDRHMNLVLGDCEEYRKVKNKKGSGGSGPNAIVEEKEEKRMLGLVLLRGENVVSLTVEGPPPPDEEAKATPGGPGMGRAAGRGIAVGAPVMGAPVGLAGPVRGVGGPAQSLMTPAAV----GFPPRGLPP 159
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A7S2HQ73_9STRA (Small nuclear ribonucleoprotein-associated protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQ73_9STRA) HSP 1 Score: 184 bits (468), Expect = 7.950e-55 Identity = 101/131 (77.10%), Postives = 114/131 (87.02%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVR 131 MAMA+SSKML+++NYRMRVTI DSR L+GTFMAFD+HMN+VLGDCEE+RKIK+KKG G EEREEKRTLGLVLVRGE VVS++VEGPPPP+ G PGGPGVGRAAGRG+P AP G APAGLAGPVR Sbjct: 1 MAMAKSSKMLNFINYRMRVTIQDSRCLVGTFMAFDKHMNLVLGDCEEYRKIKAKKGVGVQ--EEREEKRTLGLVLVRGEMVVSMSVEGPPPPDNEGKEAPGGPGVGRAAGRGLPAAPL-GVAPAGLAGPVR 128
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A1Y1IDA8_KLENI (SnRNP n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDA8_KLENI) HSP 1 Score: 183 bits (464), Expect = 2.630e-53 Identity = 103/157 (65.61%), Postives = 124/157 (78.98%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEG---GTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQAASVSQGFRP 154 M+M++SSK+LH++NYRMRVT+ D R L+G FMAFD+HMN+VLGDCEE RK+ KKG+ A E+REE+RTLGL+L+RGE VVSLTVEGPPP EE A GGPGVGRAAGRG+P AP AAP GLAGPVRGVGGPAA++MQPQ ++ P Sbjct: 1 MSMSKSSKLLHHINYRMRVTLQDGRQLVGKFMAFDKHMNLVLGDCEEFRKLPQKKGKSA---EDREERRTLGLLLLRGEEVVSLTVEGPPPQEESRAKAMAASGGPGVGRAAGRGIPTAPLGQAAP-GLAGPVRGVGGPAAAMMQPQGRGIAAAAAP 153
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A6V3BNK5_HETAK (Small nuclear ribonucleoprotein-associated protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BNK5_HETAK) HSP 1 Score: 177 bits (449), Expect = 3.780e-52 Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEGGTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVR 131 M+M+RSSKML Y+NYRMRVT+ D R+L+GTFMAFDRHMN+ LGD EE+RK+K+KKGQG E+REEKR LGLVLVRGENVVSL+VEGPPPPE+ A PGGPG GRAAGRG APAAGA P GLAGPVR Sbjct: 1 MSMSRSSKMLQYINYRMRVTLQDGRMLVGTFMAFDRHMNLCLGDTEEYRKLKNKKGQGVV--EDREEKRALGLVLVRGENVVSLSVEGPPPPEDDAKATPGGPGAGRAAGRGTVQAPAAGA-PVGLAGPVR 128
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: UPI001C4E8A0F (small nuclear ribonucleoprotein-associated proteins B and B'-like n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C4E8A0F) HSP 1 Score: 179 bits (455), Expect = 5.560e-52 Identity = 102/149 (68.46%), Postives = 119/149 (79.87%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEG-----GTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQ 144 M+M++SSKML Y+NYRMRVTI D R L+G FMAFDRHMN+VLGDCEE RK+ KG+ +EEREE+RTLGLVL+RGE VVS+TVEGPPPPEE G A GPG+GRAAGRG+P AP A P GLAGPVRGVGGPA+++MQPQ Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGK---KNEEREERRTLGLVLLRGEEVVSMTVEGPPPPEESRAKAVGAAAMAGPGLGRAAGRGIPTAPLVQAQP-GLAGPVRGVGGPASNMMQPQ 145
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A822XXF9_NELNU (Small nuclear ribonucleoprotein-associated protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822XXF9_NELNU) HSP 1 Score: 177 bits (448), Expect = 7.060e-52 Identity = 100/149 (67.11%), Postives = 117/149 (78.52%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEG-----GTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQ 144 M+M++SSKML Y+NYRMRVTI D R L+G FMAFDRHMN+VLGDCEE RK+ KG+ +EERE++RTLGLVL+RGE VVS+TVEGPPPP+E G A GPG+GRAAGRG+P AP A P GLAGPVRGVGGPA +MQPQ Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGK---KNEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDENRAKASGAAAMAGPGIGRAAGRGIPTAPLVQAQP-GLAGPVRGVGGPAPGMMQPQ 145
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A0A5J5B5C3_9ASTE (Small nuclear ribonucleoprotein-associated protein n=3 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5B5C3_9ASTE) HSP 1 Score: 179 bits (453), Expect = 9.360e-52 Identity = 102/149 (68.46%), Postives = 117/149 (78.52%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEG-----GTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQ 144 M+M++SSKML Y+NYRMRVTI D R LIG FMAFDRHMN+VLGDCEE RK+ KG+ +EEREE+RTLGLVL+RGE V+S+TVEGPPPPEE G A GPG+GRAAGRG+P AP A P GLAGPVRGVGGPA +MQPQ Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGK---KNEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQP-GLAGPVRGVGGPAPGMMQPQ 145
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Match: A5BRN5_VITVI (Small nuclear ribonucleoprotein-associated protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=A5BRN5_VITVI) HSP 1 Score: 178 bits (452), Expect = 1.360e-51 Identity = 101/149 (67.79%), Postives = 117/149 (78.52%), Query Frame = 0 Query: 1 MAMARSSKMLHYVNYRMRVTIMDSRVLIGTFMAFDRHMNIVLGDCEEHRKIKSKKGQGAHAHEEREEKRTLGLVLVRGENVVSLTVEGPPPPEEG-----GTAKPGGPGVGRAAGRGMPLAPAAGAAPAGLAGPVRGVGGPAASIMQPQ 144 M+M++SSKML Y+NYRMRVTI D R L+G FMAFDRHMN+VLGDCEE RK+ KG+ +EEREE+RTLGLVL+RGE V+S+TVEGPPPPEE G A GPG+GRAAGRG+P AP A P GLAGPVRGVGGPA +MQPQ Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGK---KNEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQP-GLAGPVRGVGGPAPGMMQPQ 145 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|47524 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|47524|CE47523_459 ID=Trimin1|47524|CE47523_459|Name=jgi.p|Trimin1|47524|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bpback to top |