Trimin1|35501|CE35500_95 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|35501
Unique NameTrimin1|35501|CE35500_95
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length206
Homology
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 9.650e-143
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 MSPLASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNFLEPTDPEYMQHIPPPQEPEDEESTAHLGGTISPVSSTAKLARSAVKVEGKFAPLLPSLMDFAFPFDDSSEDDLNSAHDLGAFDMSEDVGDFPLLDGGHEPFGASLSFLGTADELAADLCTA 205
            MSPLASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNFLEPTDPEYMQHIPPPQEPEDEESTAHLGGTISPVSSTAKLARSAVKVEGKFAPLLPSLMDFAFPFDDSSEDDLNSAHDLGAFDMSEDVGDFPLLDGGHEPFGASLSFLGTADELAADLCTA
Sbjct:    1 MSPLASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNFLEPTDPEYMQHIPPPQEPEDEESTAHLGGTISPVSSTAKLARSAVKVEGKFAPLLPSLMDFAFPFDDSSEDDLNSAHDLGAFDMSEDVGDFPLLDGGHEPFGASLSFLGTADELAADLCTA 205          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.380e-28
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 0
Query:   31 YRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            YRGVCVTREGKWRAVIYKERKQLYLGVFESE+DAAKAHDRAAR HFG QAMVNF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.240e-27
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0
Query:   19 TARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            T RRRGR+GKS+YRGVCVTREGKWRAVIYKERKQLYLGV+ESE+DAAKAHDRAAR+HF   A+ NF
Sbjct:   95 THRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 160          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.320e-26
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0
Query:   21 RRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            RRRGRKG+SIYRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR+HF  ++M NF
Sbjct:  133 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 196          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.440e-26
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0
Query:   21 RRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            RRRGRKG+SIYRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR+HF  ++M NF
Sbjct:  120 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 183          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 4.780e-17
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0
Query:   15 PRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            PR  +A RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGVFE+E +AAKA+D +A  +FG  A++NF
Sbjct:  136 PRVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 5.840e-17
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0
Query:   15 PRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            PR  +A RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGVFE+E +AAKA+D +A  +FG  A++NF
Sbjct:  149 PRVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 2.250e-16
Identity = 62/140 (44.29%), Postives = 78/140 (55.71%), Query Frame = 0
Query:    4 LASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNFLEPTDPEYMQHIPPPQEPEDEESTAHLGGTISPVSSTAKLARSAVKVEGKFA--PLLPS 141
            L SAS P     R   + RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA  HF   A +NF +  + +          P    +TA  GG  +P S T      A  +EG  A  P LPS
Sbjct:  381 LVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPF---ATAGAGGAAAPRSCTPP----ATYLEGDAAAAPALPS 513          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.170e-15
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:   22 RRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA  HF   A +NF
Sbjct:  341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403          
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Match: A0A835ZDL0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.250e-15
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   22 RRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
            RRGRKGKSIYRGV  TREGK+RAV+Y ERKQ+YLGV+  E+ AA+AHD+    H    A +NF
Sbjct:  125 RRGRKGKSIYRGVSHTREGKYRAVLYVERKQIYLGVYNDEVSAARAHDKGVLAHGLGHAYLNF 187          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|35501 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CI56_9STRA9.650e-143100.00AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA2.380e-2894.44AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A6H5JUY3_9PHAE1.240e-2783.33AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FZ71_ECTSI1.320e-2684.38AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE1.440e-2684.38AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A6V1UZI2_HETAK4.780e-1761.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK5.840e-1761.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KQM0_9PHAE2.250e-1644.29AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LFR4_ECTSI1.170e-1563.49Pathogenesis-related transcriptional factor and ER... [more]
A0A835ZDL0_9STRA3.250e-1563.49AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 30..91
e-value: 1.7E-11
score: 54.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 30..74
e-value: 3.1E-5
score: 24.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 30..85
score: 12.878933
IPR001471AP2/ERF domainCDDcd00018AP2coord: 29..84
e-value: 8.59691E-13
score: 58.8223
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 30..86
e-value: 6.7E-15
score: 57.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 29..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:873307..874017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|35501mRNA_5535Tribonema minus UTEX_B_3156 mRNAContig_19 873209..874172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|35501|CE35500_95 ID=Trimin1|35501|CE35500_95|Name=jgi.p|Trimin1|35501|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=206bp
MSPLASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKER
KQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNFLEPTDPEYMQHIPPPQ
EPEDEESTAHLGGTISPVSSTAKLARSAVKVEGKFAPLLPSLMDFAFPFD
DSSEDDLNSAHDLGAFDMSEDVGDFPLLDGGHEPFGASLSFLGTADELAA
DLCTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf