Trimin1|338323|MIX47086_28_24 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|338323
Unique Name	Trimin1\|338323\|MIX47086_28_24
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	901

Homology

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BLAST of jgi.p|Trimin1|338323 vs. uniprot
Match: A0A835YHM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM3_9STRA)

HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0
Identity = 900/900 (100.00%), Postives = 900/900 (100.00%), Query Frame = 0

Query:    1 MAPMVGDECAKAAPPTESAAVSAHSRXXXXXXXXPIRPSLPSPLGLLPGSRWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRRWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCAEGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAAGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAXXXXXASPVPHVRGERLARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHNRRQPLRSAAPXXXXXXXXXHLCSXXXXXXXXARANAAAAASPVQHVRGERLARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLRAVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYTLPQRCDTSIHDCGARSHPSARPASPACACAXXXXXXXXTRRATCRYTSIAGAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPPNPPGAGAAPXXXXXXXXXXXXXXXXXXXXAAGAGAXXXXXXXXXXXXXXXXNENAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKXXXXXXXXXXXXXXXXXXXXXACAGVPNRDMEELARARGCXXXXXXXXXXWXXWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG 900
            MAPMVGDECAKAAPPTESAAVSAHSRXXXXXXXXPIRPSLPSPLGLLPGSRWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRRWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCAEGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAAGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAXXXXXASPVPHVRGERLARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHNRRQPLRSAAPXXXXXXXXXHLCSXXXXXXXXARANAAAAASPVQHVRGERLARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLRAVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYTLPQRCDTSIHDCGARSHPSARPASPACACAXXXXXXXXTRRATCRYTSIAGAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPPNPPGAGAAPXXXXXXXXXXXXXXXXXXXXAAGAGAXXXXXXXXXXXXXXXXNENAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKXXXXXXXXXXXXXXXXXXXXXACAGVPNRDMEELARARGCXXXXXXXXXXWXXWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG
Sbjct:    1 MAPMVGDECAKAAPPTESAAVSAHSRXXXXXXXXPIRPSLPSPLGLLPGSRWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRRWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCAEGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAAGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAXXXXXASPVPHVRGERLARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHNRRQPLRSAAPXXXXXXXXXHLCSXXXXXXXXARANAAAAASPVQHVRGERLARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLRAVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYTLPQRCDTSIHDCGARSHPSARPASPACACAXXXXXXXXTRRATCRYTSIAGAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPPNPPGAGAAPXXXXXXXXXXXXXXXXXXXXAAGAGAXXXXXXXXXXXXXXXXNENAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKXXXXXXXXXXXXXXXXXXXXXACAGVPNRDMEELARARGCXXXXXXXXXXWXXWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG 900

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|338323 vs. uniprot

BLAST of jgi.p|Trimin1|338323 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YHM3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 690..783
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 695..727
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..472
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..517
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_90	contig	Contig_90:570863..578435 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|338323	mRNA_11471	Tribonema minus UTEX_B_3156	mRNA	Contig_90 570863..578435 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|338323|MIX47086_28_24 ID=Trimin1|338323|MIX47086_28_24|Name=jgi.p|Trimin1|338323|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=901bp
MAPMVGDECAKAAPPTESAAVSAHSRHTPPPPPSPIRPSLPSPLGLLPGS
RWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRR
WSRRRRRAKQAPSRRRRRRRRRAQAKEPPARGGRRRRAAKQPPPCAPCGA
EGVLRGGGGRGGGAEETASRWRGRAEAAKEAAAARRRRCCRLLLLLLLLR
RLRLLRRGGGSGGGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCA
EGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRRLLRARRR
RELRRRRRAAPLPVRVAAACAAGAAPQREPNGASGAPPPPPPPHACSTSA
AGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAAAAAAASPVPHVRGERL
ARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHN
RRQPLRSAAPPPPPPPPPPHLCSASAASASHARANAAAAASPVQHVRGER
LARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLR
AVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYT
LPQRCDTSIHDCGARSHPSARPASPACACAAPPPPPPPTRRATCRYTSIA
GAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPP
NPPGAGAAPPAGAGVPNNPPPNPPPAGAGAAGAGAPPKLNAGAAAAGAAP
PNENAPPAAGAGAGAAAPKPPKPPDGAGAAAAGVPKPKPVVGAGAGVPKG
LGAAAAAPKPLKLKEDAGAGACAGVPNRDMEELARARGCCCCRTERCCCW
CCWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG
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