mRNA_11471 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|338323
Unique Name	mRNA_11471
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|338323 vs. uniprot
Match: A0A835YHM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM3_9STRA)

HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0
Identity = 900/900 (100.00%), Postives = 900/900 (100.00%), Query Frame = 1

Query:    1 MAPMVGDECAKAAPPTESAAVSAHSRXXXXXXXXPIRPSLPSPLGLLPGSRWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRRWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCAEGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAAGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAXXXXXASPVPHVRGERLARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHNRRQPLRSAAPXXXXXXXXXHLCSXXXXXXXXARANAAAAASPVQHVRGERLARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLRAVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYTLPQRCDTSIHDCGARSHPSARPASPACACAXXXXXXXXTRRATCRYTSIAGAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPPNPPGAGAAPXXXXXXXXXXXXXXXXXXXXAAGAGAXXXXXXXXXXXXXXXXNENAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKXXXXXXXXXXXXXXXXXXXXXACAGVPNRDMEELARARGCXXXXXXXXXXWXXWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG 2700
            MAPMVGDECAKAAPPTESAAVSAHSRXXXXXXXXPIRPSLPSPLGLLPGSRWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRRWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCAEGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAAGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAXXXXXASPVPHVRGERLARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHNRRQPLRSAAPXXXXXXXXXHLCSXXXXXXXXARANAAAAASPVQHVRGERLARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLRAVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYTLPQRCDTSIHDCGARSHPSARPASPACACAXXXXXXXXTRRATCRYTSIAGAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPPNPPGAGAAPXXXXXXXXXXXXXXXXXXXXAAGAGAXXXXXXXXXXXXXXXXNENAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKXXXXXXXXXXXXXXXXXXXXXACAGVPNRDMEELARARGCXXXXXXXXXXWXXWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG
Sbjct:    1 MAPMVGDECAKAAPPTESAAVSAHSRXXXXXXXXPIRPSLPSPLGLLPGSRWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRRWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGAEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCAEGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAAGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAXXXXXASPVPHVRGERLARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHNRRQPLRSAAPXXXXXXXXXHLCSXXXXXXXXARANAAAAASPVQHVRGERLARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLRAVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYTLPQRCDTSIHDCGARSHPSARPASPACACAXXXXXXXXTRRATCRYTSIAGAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPPNPPGAGAAPXXXXXXXXXXXXXXXXXXXXAAGAGAXXXXXXXXXXXXXXXXNENAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPKXXXXXXXXXXXXXXXXXXXXXACAGVPNRDMEELARARGCXXXXXXXXXXWXXWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG 900

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|338323 vs. uniprot

BLAST of jgi.p|Trimin1|338323 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YHM3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_90	contig	Contig_90:570863..578435 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|338323\|MIX47086_28_24
Hectar predicted targeting category	other localisation
TranscriptId	338645
Track	FilteredModels1
ProteinId	338323

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|338323	gene_11471	Tribonema minus UTEX_B_3156	gene	Contig_90 570863..578435 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|338323	Trimin1\|338323\|MIX47086_28_24	Tribonema minus UTEX_B_3156	polypeptide	Contig_90 570863..578435 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11471_8	exon_11471_8	Tribonema minus UTEX_B_3156	exon	Contig_90 570863..571570 -
exon_11471_7	exon_11471_7	Tribonema minus UTEX_B_3156	exon	Contig_90 573554..573815 -
exon_11471_6	exon_11471_6	Tribonema minus UTEX_B_3156	exon	Contig_90 574818..575104 -
exon_11471_5	exon_11471_5	Tribonema minus UTEX_B_3156	exon	Contig_90 575377..575609 -
exon_11471_4	exon_11471_4	Tribonema minus UTEX_B_3156	exon	Contig_90 575940..576148 -
exon_11471_3	exon_11471_3	Tribonema minus UTEX_B_3156	exon	Contig_90 576562..576784 -
exon_11471_2	exon_11471_2	Tribonema minus UTEX_B_3156	exon	Contig_90 577327..578085 -
exon_11471_1	exon_11471_1	Tribonema minus UTEX_B_3156	exon	Contig_90 578414..578435 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11471	CDS_11471	Tribonema minus UTEX_B_3156	CDS	Contig_90 578414..578435 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_90:570863..578435-
coding sequence from alignment at Contig_90:570863..578435-

spliced messenger RNA

>mRNA_11471 ID=mRNA_11471|Name=jgi.p|Trimin1|338323|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2703bp|location=Sequence derived from alignment at Contig_90:570863..578435- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCCCATGGTGGGGGATGAATGCGCAAAGGCCGCGCCTCCAACAGA
GAGCGCAGCTGTAAGTGCACATTCACGGCATACCCCCCCGCCACCCCCTT
CCCCCATTCGGCCCTCACTTCCTTCGCCCCTTGGTCTTCTTCCCGGATCG
CGATGGATTCGTGGGGGCCACCGAGAACAGCCCGCCGCCCGCTCCCGCGT
CCGCGGGGGCCGGCGCCCCCCCGAAACCCCCAAACCCCCCTGTCGCTGCA
GCTGGGGCGGGCGCGGCGGCGCCGAAACCGCCAAAACCCACCGCAGGCGC
TGGAGCCGCCGGCGCCGCCGAGCCAAACAGGCCCCCTCCCGCCGCCGGCG
CCGGCGCCGCCGCCGCGCCCAGGCCAAAGAGCCCCCCGCCCGCGGCGGGC
GCAGGCGCCGCGCTGCCAAACAGCCCCCCCCCTGTGCCCCCTGCGGCGCC
GAAGGGGTTTTGCGCGGCGGCGGCGGCAGGGGCGGCGGTGCCGAAGAGAC
CGCCTCCCGCTGGCGCGGGCGCGCTGAGGCTGCCAAAGAGGCCGCCGCCG
CCCGGCGCCGGCGCTGCTGCCGCCTGCTGTTGCTGCTGCTGCTGCTGCGT
CGCCTGCGGCTGCTGCGCCGCGGCGGCGGCAGCGGCGGCGGCCTTGGCGC
GCTGCCGCGCCGCGCGGCGCGCCTCGTCCGCGCGCTCCGCCCTGTCGGCG
GCGGCGAAGGGGTCCTCCATGCCGCCGCGGGCGCGGCGCACCTGTGCGCG
GAGGGGCGCCACAACGCGTCAACAGTGCTCATGCGTGTACACAACTTCAA
GTGCACGCACCAGCGCGCGCAGCGCGTCCGCCTGCGCGTGCGTCCCCGCG
ATGCGCCCCGCCACGCGCACCATCGCCGCCTGCTGCGCGCGCGCCGCCGC
CGCGAGCTGCGCCGCCGCCGGCGCGCCGCGCCGCTGCCCGTACGCGTCGC
CGCCGCCTGCGCTGCTGGCGCGGCGCCGCAGCGCGAGCCTAACGGCGCAT
CGGGCGCGCCACCGCCGCCGCCGCCGCCTCACGCTTGCAGCACGTCCGCT
GCGGGCGCCTCGCACGCAATCGTACTACCTTGCCACAACTCCACAAAAGT
CAACACAGACATAGCGGCAGTTCCCGCCGCTGCCATTGCGCAGCGCGCTG
CTGCCGCCGCCGCCGCCTCACCAGTGCCGCACGTCCGCGGCGAGCGCCTC
GCACGCAATCGTAGACATAACTCGGTTGCCAGTGGTCTCATGACGCGCAG
CGCGCTGCCGCCGCCGCTGCCTCACCGGTGCAGCGCGTCCGCGGCGAGCG
CCTCGCACGCGGTCGTACTACCCTACCAAAGTTCAAGGGAAGTCCACAAT
CGCAGACAGCCGCTGCGCAGCGCGGCGCCGCCGCCGCCGCCGCCGCCGCC
GCCGCCTCACCTGTGCAGCGCGTCCGCGGCGAGCGCCTCGCACGCGCGCG
CCAATGCCGCCGCCGCCGCCTCACCTGTGCAGCACGTCCGCGGCGAGCGC
CTCGCACGCGGCGGCGCGCTCCGCGAGGCGCGCCGCGGCGCCCCACATGT
ACGGCGACGGCAGGCGCTGCGCGACGTGCAGGCCGCTGGGGTGGCGCAGC
AGCTGCGCGGGCGCGCGGCCGTGGCGCTCCACGCTCTCGGCCGCCTGCGC
GCTGTCGGCCTTGAGCTGCGCCGCCGCTGTCTGCGCCGCTGCGCGCGGGG
GGGGGGGGGCAAGGACATTGGGAGATGGGGGGGCCGGCGTCCCCCACTAC
TGCGCGCGCCCAACTACCGGTACGAGCATCCAAGGGGCTGTACATACACA
CTGCCGCAACGCTGCGACACATCTATACATGACTGCGGCGCCCGCTCTCA
CCCATCTGCGCGGCCTGCGTCTCCAGCATGCGCCTGCGCAGCACCGCCGC
CGCCGCCTCCGCCGACACGGCGCGCTACATGTCGCTACACTAGCATTGCG
GGCGCGCACACGCAATGCGCAACGGGTCCGCACACGATGACTGCGTGCTG
TCATCGAGCGCCATGCGCCCGCCAGGCATGTAAATGGCGGCAGCGCTGGG
CGCACTCCTACGCACCTGAAGGCGCAGGCGCAGCGGCTCCGAATCCCCCA
AACCCCCCGGGCGCCGGCGCGGCGCCCCCCGCAGGCGCAGGAGTGCCGAA
CAACCCCCCCCCAAACCCCCCGCCCGCCGGCGCCGGCGCCGCAGGTGCGG
GCGCGCCGCCAAAACTGAACGCCGGCGCAGCGGCAGCAGGCGCGGCGCCG
CCAAATGAGAACGCCCCGCCCGCCGCCGGCGCCGGCGCCGGCGCCGCAGC
TCCGAAACCGCCGAAACCGCCGGACGGCGCGGGCGCTGCTGCTGCCGGCG
TTCCGAAGCCGAAGCCTGTTGTGGGGGCGGGGGCGGGGGTGCCGAAGGGC
TTGGGCGCGGCGGCGGCAGCGCCGAAGCCGCTGAAGCTGAAGGAGGACGC
CGGCGCGGGCGCTTGCGCGGGTGTGCCGAATAGGGACATGGAGGAGCTGG
CGCGCGCGCGCGGCTGTTGCTGCTGTCGCACGGAGCGCTGCTGCTGCTGG
TGCTGCTGGTCGAGCGCGCTGTCGACGGGGCGCGGCGGCTGTGGTGAGGC
TCAGCAGACGGCAGGTGCCTTGCAGTGGCGCGCCGGCCGAGGCACTGCCG
CGCGGGTGCGGTGTAACGGGGGCTTCTGCAACCGAGGGATAGGGGGGGGA
TGA

protein sequence of jgi.p|Trimin1|338323

>Trimin1|338323|MIX47086_28_24 ID=Trimin1|338323|MIX47086_28_24|Name=jgi.p|Trimin1|338323|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=901bp
MAPMVGDECAKAAPPTESAAVSAHSRHTPPPPPSPIRPSLPSPLGLLPGS
RWIRGGHREQPAARSRVRGGRRPPETPKPPCRCSWGGRGGAETAKTHRRR
WSRRRRRAKQAPSRRRRRRRRRAQAKEPPARGGRRRRAAKQPPPCAPCGA
EGVLRGGGGRGGGAEETASRWRGRAEAAKEAAAARRRRCCRLLLLLLLLR
RLRLLRRGGGSGGGLGALPRRAARLVRALRPVGGGEGVLHAAAGAAHLCA
EGRHNASTVLMRVHNFKCTHQRAQRVRLRVRPRDAPRHAHHRRLLRARRR
RELRRRRRAAPLPVRVAAACAAGAAPQREPNGASGAPPPPPPPHACSTSA
AGASHAIVLPCHNSTKVNTDIAAVPAAAIAQRAAAAAAASPVPHVRGERL
ARNRRHNSVASGLMTRSALPPPLPHRCSASAASASHAVVLPYQSSREVHN
RRQPLRSAAPPPPPPPPPPHLCSASAASASHARANAAAAASPVQHVRGER
LARGGALREARRGAPHVRRRQALRDVQAAGVAQQLRGRAAVALHALGRLR
AVGLELRRRCLRRCARGGGGKDIGRWGGRRPPLLRAPNYRYEHPRGCTYT
LPQRCDTSIHDCGARSHPSARPASPACACAAPPPPPPPTRRATCRYTSIA
GAHTQCATGPHTMTACCHRAPCARQACKWRQRWAHSYAPEGAGAAAPNPP
NPPGAGAAPPAGAGVPNNPPPNPPPAGAGAAGAGAPPKLNAGAAAAGAAP
PNENAPPAAGAGAGAAAPKPPKPPDGAGAAAAGVPKPKPVVGAGAGVPKG
LGAAAAAPKPLKLKEDAGAGACAGVPNRDMEELARARGCCCCRTERCCCW
CCWSSALSTGRGGCGEAQQTAGALQWRAGRGTAARVRCNGGFCNRGIGGG
*

mRNA from alignment at Contig_90:570863..578435-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11471 ID=mRNA_11471|Name=jgi.p|Trimin1|338323|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7573bp|location=Sequence derived from alignment at Contig_90:570863..578435- (Tribonema minus UTEX_B_3156 )
ATGGCGCCCATGGTGGGGGATGGTGAGCTAAATAGCATTGGGCGATCACA
TCGCCAGGCTCTAGTGCTGCGCTGTCGAATTAATTGCTGGCCACAGCTAG
GATATGACCATTGGCAGCTCGTGTTCGCTGCATATGCAACTTCAACTGCA
GCTGCCAAAACACTGGCCTCCAGGATCTCCAGGGTCATGAATGGCTCGCA
GCAGCATGAACTCAGTATGTCGCCATGCGTTCAGCTCATGCACGGCGAAT
CGCAAAGACTGTCCCAGGGACCCGCACGCACACAGACAACGAGTCATGTT
GGCAGAGTAATAAAGAGGCTTGCAGCACAGCTCAAATCTGAACCATCTAG
AATGCGCAAAGGCCGCGCCTCCAACAGAGAGCGCAGCTGTAAGTGCACAT
TCACGGCATACCCCCCCGCCACCCCCTTCCCCCATTCGGCCCTCACTTCC
TTCGCCCCTTGGTCTTCTTCCCGGATCGCGATGGATTCGTGGGGGCCACC
GAGAACAGCCCGCCGCCCGCTCCCGCGTCCGCGGGGGCCGGCGCCCCCCC
GAAACCCCCAAACCCCCCTGTCGCTGCAGCTGGGGCGGGCGCGGCGGCGC
CGAAACCGCCAAAACCCACCGCAGGCGCTGGAGCCGCCGGCGCCGCCGAG
CCAAACAGGCCCCCTCCCGCCGCCGGCGCCGGCGCCGCCGCCGCGCCCAG
GCCAAAGAGCCCCCCGCCCGCGGCGGGCGCAGGCGCCGCGCTGCCAAACA
GCCCCCCCCCTGTGCCCCCTGCGGCGCCGAAGGGGTTTTGCGCGGCGGCG
GCGGCAGGGGCGGCGGTGCCGAAGAGACCGCCTCCCGCTGGCGCGGGCGC
GCTGAGGCTGCCAAAGAGGCCGCCGCCGCCCGGCGCCGGCGCTGCTGCCG
CCTGCTGTTGCTGCTGCTGCTGCTGCGTCGCCTGCGGCTGCTGCGCCGCG
GCGGCGGCAGCGGCGGCGGCCTTGGCGCGCTGCCGCGCCGCGCGGCGCGC
CTCGTCCGCGCGCTCCGCCCTGTCGGCGGCGGCGAAGGGGTCCTCCATGC
CGCCGCGGGCGCGGCGCACCTGTGCGCGGAGGGGCGCCACAACGCGTCAA
CAGTGCTCAGTAAGGCAGGCGCAAAATGATGTGTTTCTGTAAAGGTTGCG
TGACTGCTCCGCACGTTCGCGCGCGCTTCTGCAAGCACTCGAGGCTGGTA
TGGAGTGGCGCGGACGACGCATGGGTATGTATCATCACATGCGCCCGAGG
CCTTCAAGGAGCGCACAACGGGACTGCTCGGAGCAGCATTCTCGTAGGCA
ATCTCCAGAGGGCGCGCAGTGGGCAGCAGCGGCTGATGGCCTGCGTGCGT
GCAGGCCGCGTGTCACGCGCATAGGCCCCTGAGAAGCAAATCGATGACTG
CGCCACTAACTATCTGCAGTACATGATTATGGCAACAGCTGCGACCACCA
GCGCCACAGTTGTCCCGATAGCCCCCCCCCATCCCAAAATGCCGCGTCCC
CAGCGATCACACCGCGCCCGCACACCGCGCCCCACATCTGGCGCGCACGT
CCCGCTCGCCGTCTCCGTTCAGCATCCCTCCGCACTCCTAATCCGCCACG
AGGGCGTCCGCCGGCGCGCACGCGCCTGCGCTCTACCCCGCACTTTAACA
GTGCGTGTACACAACTTCAAGTGCACGCACCAGCGCGCGCAGCGCGTCCG
CCTGCGCGTGCGTCCCCGCGATGCGCCCCGCCACGCGCACCATCGCCGCC
TGCTGCGCGCGCGCCGCCGCCGCGAGCTGCGCCGCCGCCGGCGCGCCGCG
CCGCTGCCCGTACGCGTCGCCGCCGCCTGCGCTGCTGGCGCGGCGCCGCA
GCGCGAGCCTAACGGCGCATCGGGGTAGGCATGAATTGCGAAACGGGATG
GGCTATTGGTGAGGCGCGAAGGAGGCCGCAAGGTAGTTTTGTTGCAGCGC
CGCAGCGCAAGCCTGACGGCGCATCGGGGCAAGTGTGTGTTGCAAAACGG
AACAAGTTATTAGTGAGGCCGAAAGGAACTTTTGGTGTGGTGATGCTCAC
CCCACAGATCGCCACAACAGGTGGCCGAGGAGAGACTTTGCTGGCGCTGG
TCATCCCCAGGGGTCTACATGGGGGTGGTACGCAGAGAGCTGTAGTCTTG
ACAGCCTTTATATACATCAGCGAGCCTTTATAGACCGGCTAGCACCTCGC
ACGCGACTGTACTGCTCTGCTCTACCAAAAGAGGAAGAACATTACAAGCA
CAGAAGCAGTACCCCCACACCCGCTGCCACTGCGCAGCGCGCCACCGCCG
CCGCCGCCGCCTCACGCTTGCAGCACGTCCGCTGCGGGCGCCTCGCACGC
AATCGTACTACCTTGCCACAACTCCACAAAAGTCAACACAGACATAGCGG
CAGTTCCCGCCGCTGCCATTGCGCAGCGCGCTGCTGCCGCCGCCGCCGCC
TCACCAGTGCCGCACGTCCGCGGCGAGCGCCTCGCACGCAATCGTAGTAT
GTACCTTACCACAACATGGATAACATTACAGAAATGTAGAGGAAGTTTAC
CCCCTCCCCACCCGCTGCCGCTGCGCACTGCCGCCGCCCCCGCCGCCTCA
CCTGTGCAGCACGTCCGCGGCGAGCGTATCGCACGCAGTTGTACTACCTT
ACCACAACATGAATAACATTATAAACGCAGAGTAAATACTCGGCCCCTGC
AGTGCGCTGCCGCCGCCGCCGCCGCCGCCTGTGCAGCTCATCCCTGCGCC
GTGCGCCTTACAAGCGGTCGTAGTAATCTGCCCTACCAAATCACAAAGAA
CATGACAAGCACTACCTCCCCCACAGGACATAACTCGGTTGCCAGTGGTC
TCATGACGCGCAGCGCGCTGCCGCCGCCGCTGCCTCACCGGTGCAGCGCG
TCCGCGGCGAGCGCCTCGCACGCGGTCGTACTACCCTACCAAAGTTCAAG
GGAAGTCCACAATCGCAGACAGCCGCTGCGCAGCGCGGCGCCGCCGCCGC
CGCCGCCGCCGCCGCCGCCTCACCTGTGCAGCGCGTCCGCGGCGAGCGCC
TCGCACGCGGTTGTTGTGGATCACATTACCAGACCTTGAAGAAAGTCAAC
AGACGCAGAGGAAGTACTCCGCCGCTGCCACTGCGTACCGCGGCGACAGA
CAAGGCAAGTACTCCCGCCGCTGCCACTGCGTAGCGCGTCGCCGCCGCCT
CACCTGTGCAGCACGTCCGCGGCTAGCGCCTCGCACGCAGTCGTACTACT
CTACCAAAACATCAATAACATTACAAAACGCAGAGGAAGTTTACCCCCCC
CCCCCCCCAAACTGCTGCTGCTGCTGCGCAGCGCGCCAATGCCGCCGCCG
CCGCCTCACCTGTGCAGCACGTCCGCGGCGAGCGCCTCGCACGCGGCGGC
GCGCTCCGCGAGGCGCGCCGCGGCGCCCCACATGTACGGCGACGGCAGGC
GCTGCGCGACGTGCAGGCCGCTGGGGTGGCGCAGCAGCTGCGCGGGCGCG
CGGCCGTGGCGCTCCACGCTCTCGGCCGCCTGCGCGCTGTCGGCCTTGAG
CTGCGCCGCCGCTGTCTGCGCCGCTGCGCGCGGGGGGGGGGGGGCAAGGA
CATTGGGAGATGGGGGGGGTGAGGGGAGGGTGAGGCGGGGTGAGGCGGAA
AAGTAGCCTGCCCTCTCACGAGGTGACAACGGGGAGGCTCCATGGTGGGC
GGCTGAACAGACGAAGTGGGGCGGCGGCAACGACATGATCATGGGATGAA
GACGGGAAGAGCGTGTCAATGACGCCAAGGGGAGCTGAGACGAAGCAGCC
TGCCACAAGGTGAAAATGTCAAGGTGTATCTGTAACCTGGGCCGCCGCGC
TATTTGCGTCACTGTGCACATGCGCTGCGGCGCGCACAGGTGCCGCTGCT
GCCAGCGGGGCCGCGGCGGCGGGGTCCTCTCGTCGGTCTGTGCGCCCCGC
ATCTCCCACTGCGGCCTGCCCCTGCTGATGCACGTCGCTACTGGTGTTCA
CGCGTGTGCATGTGCGCCGCTGCGGCTAGTACCACCGCCAGCAGCACCCG
CTGCTGCGCGTCACTGCCAGCATCTGAGAGCGGGTGCACACTGCGCGCCG
CGACTGGCCCGCACGGCTATGATACTCGCCCTCTCACAGCCGTCTGCGCA
GTGTGCCGCTGACGCGTGTCGCTGCAGAGCGACCTCATCCACCGCTACGT
GTAATACAATGACTGCGCATACGCGCGACGATGACTGTTTGCACGGCTGC
GGCGCCCTCTCTCGCCCAGCCCTAATTCTTACCCTTACTCTGGACCCTAA
ACCCCCTACCCCTCTCAACCCCATCTGTGCGGCCGCGGCCCCCCCACGTG
GCGCTCGCTGACACGTGTCGCTACACGAGCGTTGGGGGCGCGCATGCGAG
GAGTGACGGGTCCGCACATGACTCTACGGCGCCCTCTCTCACCCATCTGC
TATGGGTCGCCGCAAATATGTGAGGGTGCGCATACTCGCCGTGACGGCTT
ACCCCACTGCTACTGCGCACGCCCATGCGCTGCTACGGGCATCCAAGGGG
CTATCATACACACACGCCGCGGCGGGTCCGACCACGATTGTGACTCCCCC
TCTCTCACCCATCTGCGCAGCCGGCGTCCCCCACTACTGCGCGCGCCCAA
CTACCGGTACGAGCATCCAAGGGGCTGTACATACACACTGCCGCAACGCT
GCGACACATCTATACATGACTGCGGCGCCCGCTCTCACCCATCTGCGCGG
CCTGCGTCTCCAGCATGCGCCTGCGCAGCACCGCCGCCGCCGCCTCCGCC
GACACGGCGCGCTACATGTCGCTACACTAGCATTGCGGGCGCGCACACGC
AATGCGCAACGGGTCCGCACACGATGACTGCGGTGCGCCCTCTCTCACCC
ATCTGCTATAGGTCGCCGCGAGCATGTGAGGATGTGCATACTCTCCGTGA
CAGCTTACCCCACTGCTACTGCGCGCCAACCACCGCTGCCAGCATCCAAG
GGTCCATGTATACACACACGCTGCGACGCATCTATACATGACTGCCGCGC
CCTCTCTCACCCATCTGCGCGGCCTGCGTCTCCAGCATGCGCCTGCGCAG
CGCCGCCGCCTCCGCCTCCGCCTCCGCAACATGGTCTCCCGTGGCCAACG
CCAGCTCATCCGCGACGCGCCGCTGGCTTGCAATCTCCTGCCCAAGCTGA
AGTTGCGGGGGGCGGCGGGGGGGTGTTGTGTGGGGGCGCGCAGGCGGCAA
GAGTGAGAAGTTCTGAGGTGACGCTCCTTCCGCATGCAGGAATGACCTTC
AAGTGCAATGAGAAAGCGTCAGCACATCTGCAGTACACGTCACACGGCGC
CTTTGGCCAGCAACTCGTAAAGAAGGGCGGGGGGTTGAAGCAGGCACCGG
ATCAGATGAAGTACTGTGACAACGGTCCGAGCTCAGAGTAAAGCGAAGAC
TACAGCGCAGAGCACCGTGGCAGGCATTGGCGGGTCGCGTGCTCCTGCAC
GCGCCCCCCGGGTGACGCACTACTTGTGTACAGCGTCTGCGCCTGCGGCG
TCGTAGCATGAGGGGTGAGGCTAGCACTACCTGCATACCCATGGCATCAG
GGCAGTGCTCCCCCGCCAGACTCTGTTATGCACTGCTGCGGCGCCCCCGC
ACAGCGCGCGCTTGGCATTGCCCGCAAGTGCTGACGCTGCCGCTGGTGCT
GCTGCTGCTGAGCACTCGCGCCAGTGTAGCGCGCCAGCGCGGGGCACTCG
CTTACCGCTCAGGGATGCGTTGAGGTAAGGGCAGCTCTGCGGCAGCGGCT
CGCACGGAACGTGTGCCGAGAAGTGCAATACCTGCTGCTGCTGCTGCTGC
CGCTGCTGCAGGGCCTGCTGCCCGACGGCGAAGCGCGCTCCCACTTGCTG
CCGCGCGCACGGAACGGCACGCACACGCGCGCCGCAGGGCAGTGCAGGGT
AAGGACCGCACACAGACATCACTAGCGCGAGCGCGGGCGACGCCGGCAGC
GGCGGCGGCAGCAGCGCTCACCTGGTCTATCGCGCGCCGCGCCGCCTCCG
GCAGCGCCTCGTACGGCGTGTCCGCCGTGATCTGCGGCTGCTGCTGCTGC
TGCTGCTGCGCCTGCTGCCCAAAGCCCAAGAGTCCCTGCGCTGGTGCCGG
AGCCCCGAAACCCCCGAAGCCGCCCCCTGCCGCCGGCGTCGGCACTGGCG
CGAAGCTAAATGGTGCGGGAGCGGCTGCGCCGAACGCGCCTGGCGCCGCT
GCTGGGGCCCCAAACGCTGCCATCAAGAAAGACGGGGGGGCAGTCGCAGG
CACCAGGGGTGATGCTCAGCGCCGATGATGCGAAGGCAGCGGTCGGCGGT
TGCTTGCGGGCAGCCCTGATTGTGGATTGGCGATTAATTGGTGAATAGTG
CTAAATGAAGGCGCTTGGCATGCGGGCGCTGCAGCCGGTGCCCACGGCAG
CGGGGCGGCGCTGTCAGCCTGGCGGCGATGCGCACACAGGCATGCCCTTG
GCGCTCGCACCGCGCTGGCGTTCAATTGCGTGTTGTTGAGCGCTGCCGCG
AATTGCAGCCCACTGCCGCTGTGCATACAGCGAAGCAACTACGCGTGCCG
CTGCACGGGGGCCGTGCCTGGTGTATCGAACGGGCAGGGCGCGTGGACTG
TCGTGCGGGCGGTTCGCATCGGCGCAGCTCCGCCCCCGTCATCGCCACAA
CATTTGTGACAGTGCTCAGCAGGCGGCGCCGAGTGACTGCGGCGGATGGC
CGCCGCGCGCTTCCCTTCCTCCGCGCGCGCGTGCGCGCGTGACAGCGCTC
ACGCAAGGCATCTCGGCAGGGCGCCACTGCATTGTCAAAGTTGAAGTATG
CGTGCATCGCCGCAGTGCTGTCATCGAGCGCCATGCGCCCGCCAGGCATG
TAAATGGCGGCAGCGCTGGGCGCACTCCTACGCACCTGAAGGCGCAGGCG
CAGCGGCTCCGAATCCCCCAAACCCCCCGGGCGCCGGCGCGGCGCCCCCC
GCAGGCGCAGGAGTGCCGAACAACCCCCCCCCAAACCCCCCGCCCGCCGG
CGCCGGCGCCGCAGGTGCGGGCGCGCCGCCAAAACTGAACGCCGGCGCAG
CGGCAGCAGGCGCGGCGCCGCCAAATGAGAACGCCCCGCCCGCCGCCGGC
GCCGGCGCCGGCGCCGCAGCTCCGAAACCGCCGAAACCGCCGGACGGCGC
GGGCGCTGCTGCTGCCGGCGTTCCGAAGCCGAAGCCTGTTGTGGGGGCGG
GGGCGGGGGTGCCGAAGGGCTTGGGCGCGGCGGCGGCAGCGCCGAAGCCG
CTGAAGCTGAAGGAGGACGCCGGCGCGGGCGCTTGCGCGGGTGTGCCGAA
TAGGGACATGGAGGAGCTGGCGCGCGCGCGCGGCTGTTGCTGCTGTCGCA
CGGAGCGCTGCTGCTGCTGGTGCTGCTGGTCGAGCGCGCTGTCGACGGGG
CGCGGCGGCTGTGGTGAGGCTCAGCAGACGGCAGGTGCCTTGCAGTGGCG
CGCCGGCCGAGGCACTGCCGCGCGGGTGCGGTGTAACGGGGGCTTCTGCA
ACCGAGGGATAGGGGGGGGATGA

Coding sequence (CDS) from alignment at Contig_90:570863..578435-

>mRNA_11471 ID=mRNA_11471|Name=jgi.p|Trimin1|338323|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2703bp|location=Sequence derived from alignment at Contig_90:570863..578435- (Tribonema minus UTEX_B_3156 )
ATGGCGCCCATGGTGGGGGATGAATGCGCAAAGGCCGCGCCTCCAACAGA
GAGCGCAGCTGTAAGTGCACATTCACGGCATACCCCCCCGCCACCCCCTT
CCCCCATTCGGCCCTCACTTCCTTCGCCCCTTGGTCTTCTTCCCGGATCG
CGATGGATTCGTGGGGGCCACCGAGAACAGCCCGCCGCCCGCTCCCGCGT
CCGCGGGGGCCGGCGCCCCCCCGAAACCCCCAAACCCCCCTGTCGCTGCA
GCTGGGGCGGGCGCGGCGGCGCCGAAACCGCCAAAACCCACCGCAGGCGC
TGGAGCCGCCGGCGCCGCCGAGCCAAACAGGCCCCCTCCCGCCGCCGGCG
CCGGCGCCGCCGCCGCGCCCAGGCCAAAGAGCCCCCCGCCCGCGGCGGGC
GCAGGCGCCGCGCTGCCAAACAGCCCCCCCCCTGTGCCCCCTGCGGCGCC
GAAGGGGTTTTGCGCGGCGGCGGCGGCAGGGGCGGCGGTGCCGAAGAGAC
CGCCTCCCGCTGGCGCGGGCGCGCTGAGGCTGCCAAAGAGGCCGCCGCCG
CCCGGCGCCGGCGCTGCTGCCGCCTGCTGTTGCTGCTGCTGCTGCTGCGT
CGCCTGCGGCTGCTGCGCCGCGGCGGCGGCAGCGGCGGCGGCCTTGGCGC
GCTGCCGCGCCGCGCGGCGCGCCTCGTCCGCGCGCTCCGCCCTGTCGGCG
GCGGCGAAGGGGTCCTCCATGCCGCCGCGGGCGCGGCGCACCTGTGCGCG
GAGGGGCGCCACAACGCGTCAACAGTGCTCATGCGTGTACACAACTTCAA
GTGCACGCACCAGCGCGCGCAGCGCGTCCGCCTGCGCGTGCGTCCCCGCG
ATGCGCCCCGCCACGCGCACCATCGCCGCCTGCTGCGCGCGCGCCGCCGC
CGCGAGCTGCGCCGCCGCCGGCGCGCCGCGCCGCTGCCCGTACGCGTCGC
CGCCGCCTGCGCTGCTGGCGCGGCGCCGCAGCGCGAGCCTAACGGCGCAT
CGGGCGCGCCACCGCCGCCGCCGCCGCCTCACGCTTGCAGCACGTCCGCT
GCGGGCGCCTCGCACGCAATCGTACTACCTTGCCACAACTCCACAAAAGT
CAACACAGACATAGCGGCAGTTCCCGCCGCTGCCATTGCGCAGCGCGCTG
CTGCCGCCGCCGCCGCCTCACCAGTGCCGCACGTCCGCGGCGAGCGCCTC
GCACGCAATCGTAGACATAACTCGGTTGCCAGTGGTCTCATGACGCGCAG
CGCGCTGCCGCCGCCGCTGCCTCACCGGTGCAGCGCGTCCGCGGCGAGCG
CCTCGCACGCGGTCGTACTACCCTACCAAAGTTCAAGGGAAGTCCACAAT
CGCAGACAGCCGCTGCGCAGCGCGGCGCCGCCGCCGCCGCCGCCGCCGCC
GCCGCCTCACCTGTGCAGCGCGTCCGCGGCGAGCGCCTCGCACGCGCGCG
CCAATGCCGCCGCCGCCGCCTCACCTGTGCAGCACGTCCGCGGCGAGCGC
CTCGCACGCGGCGGCGCGCTCCGCGAGGCGCGCCGCGGCGCCCCACATGT
ACGGCGACGGCAGGCGCTGCGCGACGTGCAGGCCGCTGGGGTGGCGCAGC
AGCTGCGCGGGCGCGCGGCCGTGGCGCTCCACGCTCTCGGCCGCCTGCGC
GCTGTCGGCCTTGAGCTGCGCCGCCGCTGTCTGCGCCGCTGCGCGCGGGG
GGGGGGGGGCAAGGACATTGGGAGATGGGGGGGCCGGCGTCCCCCACTAC
TGCGCGCGCCCAACTACCGGTACGAGCATCCAAGGGGCTGTACATACACA
CTGCCGCAACGCTGCGACACATCTATACATGACTGCGGCGCCCGCTCTCA
CCCATCTGCGCGGCCTGCGTCTCCAGCATGCGCCTGCGCAGCACCGCCGC
CGCCGCCTCCGCCGACACGGCGCGCTACATGTCGCTACACTAGCATTGCG
GGCGCGCACACGCAATGCGCAACGGGTCCGCACACGATGACTGCGTGCTG
TCATCGAGCGCCATGCGCCCGCCAGGCATGTAAATGGCGGCAGCGCTGGG
CGCACTCCTACGCACCTGAAGGCGCAGGCGCAGCGGCTCCGAATCCCCCA
AACCCCCCGGGCGCCGGCGCGGCGCCCCCCGCAGGCGCAGGAGTGCCGAA
CAACCCCCCCCCAAACCCCCCGCCCGCCGGCGCCGGCGCCGCAGGTGCGG
GCGCGCCGCCAAAACTGAACGCCGGCGCAGCGGCAGCAGGCGCGGCGCCG
CCAAATGAGAACGCCCCGCCCGCCGCCGGCGCCGGCGCCGGCGCCGCAGC
TCCGAAACCGCCGAAACCGCCGGACGGCGCGGGCGCTGCTGCTGCCGGCG
TTCCGAAGCCGAAGCCTGTTGTGGGGGCGGGGGCGGGGGTGCCGAAGGGC
TTGGGCGCGGCGGCGGCAGCGCCGAAGCCGCTGAAGCTGAAGGAGGACGC
CGGCGCGGGCGCTTGCGCGGGTGTGCCGAATAGGGACATGGAGGAGCTGG
CGCGCGCGCGCGGCTGTTGCTGCTGTCGCACGGAGCGCTGCTGCTGCTGG
TGCTGCTGGTCGAGCGCGCTGTCGACGGGGCGCGGCGGCTGTGGTGAGGC
TCAGCAGACGGCAGGTGCCTTGCAGTGGCGCGCCGGCCGAGGCACTGCCG
CGCGGGTGCGGTGTAACGGGGGCTTCTGCAACCGAGGGATAGGGGGGGGA
TGA