Trimin1|337204|MIX45967_2_18 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337204
Unique NameTrimin1|337204|MIX45967_2_18
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length330
Homology
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: A0A836C7R4_9STRA (MgtC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R4_9STRA)

HSP 1 Score: 575 bits (1481), Expect = 8.020e-206
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query:    1 MRGPHMARLSVCQMLSICTVCLMVIITRPRCGICLXXXXXXXXXXXXCDGDAHQATMRRPHLARLSVCVRCSAFVPFALMVMIIRPRCGPCLSMCQMLSASXXXXXXXXXXXXXXARIWHVSPCVSDAQRLPRLPLWRCSSGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEILHA 329
            MRGPHMARLSVCQMLSICTVCLMVIITRPRCGICLXXXXXXXXXXXXCDGDAHQATMRRPHLARLSVCVRCSAFVPFALMVMIIRPRCGPCLSMCQMLSASXXXXXXXXXXXXXXARIWHVSPCVSDAQRLPRLPLWRCSSGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEILHA
Sbjct:    1 MRGPHMARLSVCQMLSICTVCLMVIITRPRCGICLXXXXXXXXXXXXCDGDAHQATMRRPHLARLSVCVRCSAFVPFALMVMIIRPRCGPCLSMCQMLSASXXXXXXXXXXXXXXARIWHVSPCVSDAQRLPRLPLWRCSSGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEILHA 329          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: UPI0003713513 (MgtC/SapB family protein n=1 Tax=Longispora albida TaxID=203523 RepID=UPI0003713513)

HSP 1 Score: 129 bits (325), Expect = 1.360e-32
Identity = 90/186 (48.39%), Postives = 116/186 (62.37%), Query Frame = 0
Query:  141 SGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEI 326
            S   AGLRTH+LVCLGA+L T++GA       D TRIAAQV++GIGFLG GAI+REGL V GLTTAA+LWVTA++G+A GL A+  A     LV+V L  L++LED +    R   V L +    P + V    L A  S  VS+V  + +G++ L +S + R    L  +AE L  IEGV GV I
Sbjct:   27 SAQHAGLRTHMLVCLGATLATVAGA--SLPGADPTRIAAQVITGIGFLGGGAILREGLTVHGLTTAASLWVTASIGLAFGLRAWWPAAAGTVLVLVVLVLLKKLEDELLPRRRPLEVTLTVASGVPLTTVERAVLAAWPSCKVSSVRYV-SGSESLVLSVKSRRGATLAGIAEQLRTIEGVDGVAI 209          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: UPI0005254C63 (MgtC/SapB family protein n=2 Tax=Dactylosporangium TaxID=35753 RepID=UPI0005254C63)

HSP 1 Score: 122 bits (306), Expect = 7.900e-30
Identity = 93/210 (44.29%), Postives = 127/210 (60.48%), Query Frame = 0
Query:  119 WHVSPCVSDAQRLPR-LPLWRCSSGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRI-VMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEI 326
            W V P +  A  L   + L R      AGLRTH+LV  GA+LFT++G   K    D TRIAAQVV+GIGFLGAGAI +EG+ + GLTTAA+LWVTAA+G+A GL  + +AG    + +  L  L ++ +  +   R RI V L L P+ P   V   AL+A+  AHV  V   A   + + +++R   + +LP +AETL  ++GV GVEI
Sbjct:    3 WTVIPTLLIAIFLGAVIGLEREIGAQPAGLRTHMLVAAGAALFTIAG---KEVGTDPTRIAAQVVTGIGFLGAGAIFKEGVNISGLTTAASLWVTAAIGLATGLRLFWAAGAVTVIALGAL-WLFKVAEANWLPDRHRIQVTLTLAPDFPLDVVEREALEAMPGAHVLRVD-YAGHDQSIVLTARGDNSTSLPAIAETLRLLDGVQGVEI 207          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: A0A8J8GYT1_9ACTN (MgtC/SapB family protein n=2 Tax=Hamadaea sp. TaxID=2024425 RepID=A0A8J8GYT1_9ACTN)

HSP 1 Score: 120 bits (301), Expect = 4.480e-29
Identity = 84/186 (45.16%), Postives = 115/186 (61.83%), Query Frame = 0
Query:  141 SGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEI 326
            +   AGLRTH+LV LGA LFTLSGA       D TRIAAQVV+GIGFLG GAI+REG  +RGLTTAA+LWVTAA+G A+GL  +  A  T AL ++ L+ ++ +E       R   + L L P+     V    ++AL  + V+ V+    G + L ++S+ +   +L ++ E L G+ GV GVEI
Sbjct:   27 NAQPAGLRTHMLVSLGAGLFTLSGAYLPGD--DPTRIAAQVVTGIGFLGGGAILREGANIRGLTTAASLWVTAAIGTAVGLRWWFPAIATTALALIVLSLVKYVEREALPRRRLLEITLTLEPDARLDRVEQEVMEALPRSRVTRVSYSLTG-QALVMTSQPQNGTSLSVVGERLRGLAGVHGVEI 209          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: UPI00167C803B (Uncharacterized protein n=2 Tax=Dactylosporangium sucinum TaxID=1424081 RepID=UPI00167C803B)

HSP 1 Score: 119 bits (299), Expect = 8.340e-29
Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 0
Query:  145 AGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAY-----ASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEILH 328
            AGLRTH+LV  GASLFT++G       VD TRIAAQVV+GIGFLGAGAI+REG+ + GLTTAA+LWVTAA+GV  GL  Y     A+A    AL +  +A    L DR     +R  V L L P+ P   V   A+ AL +A V  +   A   + L +++R     +LP +AE L  ++GV GVEI+ 
Sbjct:   30 AGLRTHMLVAGGASLFTIAGY---EVGVDPTRIAAQVVTGIGFLGAGAILREGVNISGLTTAASLWVTAAIGVVTGLRLYWPAVAATAVAVAALWLFKMAEAHWLPDR-----QRVRVTLTLAPDFPLDVVEREAVAALPAARVLRIE-YAGHDQTLVLTARADGTASLPAIAEALRRLDGVRGVEIVR 209          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: A0A7W1JVE9_9ACTN (MgtC/SapB family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1JVE9_9ACTN)

HSP 1 Score: 120 bits (300), Expect = 9.450e-29
Identity = 82/193 (42.49%), Postives = 117/193 (60.62%), Query Frame = 0
Query:  144 DAGLRTHILVCLGASLFTLSGA------VSKNTNV---DETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRI--VMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVE 325
            +AGLRTH+LV LG++LFT+ GA      +    NV   D TRIAAQ+V+GIGFLGAGAI+R+GL VRGLTTAA LWV AA+G+A G G Y++A +T ALV++ L  L+ +  R+   +R     ++++L     P   ++ A++A G+   S V +     +RL +   L  N   P L   L  +E V  V+
Sbjct:   33 EAGLRTHLLVSLGSALFTIVGAYGFHESLDSGANVVRADPTRIAAQIVTGIGFLGAGAIIRQGLSVRGLTTAATLWVVAAVGLACGAGYYSAAVITTALVLLALYPLRVIAYRILVRFRPEDGHLLVELHAGAAPGE-IIDAVEATGARVDSVVVSQEGDRRRLELGLALPKNARSPELVLKLADVESVVEVQ 224          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: A0A537TWH0_9ACTN (MgtC/SapB family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537TWH0_9ACTN)

HSP 1 Score: 119 bits (298), Expect = 1.850e-28
Identity = 76/150 (50.67%), Postives = 98/150 (65.33%), Query Frame = 0
Query:  145 AGLRTHILVCLGASLFTLSGA------VSKNTNV---DETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRR--RIVMLDLVPNQPPSAVVVPALKALGSAHV 283
            AGLRTH+LV +GA+LFT+  A      +    NV   D TR+AAQ+V+GIGFLGAGAI+R+GL VRGLTTAA LWV AA+G A+G G Y++  +T  +V+V L   + LE  V  +WRR  R+V +D+ P QP    V P L AL    V
Sbjct:   35 AGLRTHMLVGVGAALFTIVSAYAWTDFIQAGGNVVRLDPTRVAAQIVTGIGFLGAGAIIRQGLSVRGLTTAAGLWVVAAIGTAIGAGFYSAGLITTGIVLVGLGPFRWLEGGVLRSWRRQGRVVEVDIRPQQP----VAPVLSALEGRRV 180          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: A0A7Y6CKL5_9ACTN (MgtC/SapB family protein n=2 Tax=Actinomycetia TaxID=1760 RepID=A0A7Y6CKL5_9ACTN)

HSP 1 Score: 118 bits (296), Expect = 2.230e-28
Identity = 84/187 (44.92%), Postives = 118/187 (63.10%), Query Frame = 0
Query:  141 SGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGA-YASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEI 326
            +   AGLRTH+LVCLGA++FTL+G     +  D TRIAAQVV+GIGFLG GAI+R+G+ VRGLTTAA+LW+TAA+G+A+GL   +A    T+A V+V L  ++++E  V  T R   + L L P+ P   V   A+  L  A V  V+  A G  +  + +     ++L ++ E L  + GV GVEI
Sbjct:   25 NAQTAGLRTHMLVCLGAAVFTLAGVGVGGS--DPTRIAAQVVTGIGFLGGGAILRDGVTVRGLTTAASLWMTAAIGLAVGLKWWFAPVAATVAAVIV-LWVIKRIEQEVIPTRRSLEIRLSLEPDAPLDVVEQEAIAVLQRARVLQVSYDATG--QSLVLAGQPAGDSLTVVGEHLRALPGVRGVEI 206          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: UPI001834904A (MgtC/SapB family protein n=1 Tax=Hamadaea sp. TaxID=2024425 RepID=UPI001834904A)

HSP 1 Score: 117 bits (293), Expect = 7.500e-28
Identity = 81/186 (43.55%), Postives = 115/186 (61.83%), Query Frame = 0
Query:  141 SGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEI 326
            S   AGLRTH+LV LGA+LFTL+G     +  D TRIAAQVV+GIGFLG GAI+REG  +RGLTTAA+LWVTAA+G+A+GL  + +A  T  L +  LA ++ +E       R   ++L L P+     V      +L  + V  V+  A G + L ++++ +   +L ++ E L  ++GV GVEI
Sbjct:   32 SAQPAGLRTHMLVSLGAALFTLAGTNLPGS--DPTRIAAQVVTGIGFLGGGAILREGANIRGLTTAASLWVTAAIGLAVGLRWWYAAAATTILALTVLALVKYVEREALPRRRMLEIVLTLEPDAHLDRVEQEVKSSLPRSRVLKVSYSATG-QALVLTAQPQNGTSLSVIGERLRALQGVHGVEI 214          
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Match: UPI000370295F (MgtC/SapB family protein n=1 Tax=Catelliglobosispora koreensis TaxID=129052 RepID=UPI000370295F)

HSP 1 Score: 117 bits (292), Expect = 9.000e-28
Identity = 87/193 (45.08%), Postives = 115/193 (59.59%), Query Frame = 0
Query:  134 LPLWRCSSGHDAGLRTHILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWVRGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFYTWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISSRLRLNENLPLLAETLMGIEGVAGVEI 326
            L L R  S   AGLRTH+LVC+G++LFTL+GA    T  D TR+AAQVV+GIGFLG GAI+REG  VRGLTTAA+LWV AA+G+++GL  +  A     L +  L+ L+  E  V    R   V+L L P+ P   V   A   L  A VS V+    G + L ++ + +    L  L E L  ++GV GVE+
Sbjct:   19 LGLERELSAQPAGLRTHMLVCIGSALFTLAGAEVVGT--DPTRVAAQVVTGIGFLGGGAILREGTTVRGLTTAASLWVAAAIGLSVGLRLWFVAVGATVLGLTVLSLLKYFEREVLPRRRLLEVVLTLEPDAPLDQVEQEANLILRRARVSRVSYNDTG-QSLVLTCQPQNGTPLASLGERLRRLKGVQGVEV 208          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337204 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7R4_9STRA8.020e-206100.00MgtC family-domain-containing protein n=1 Tax=Trib... [more]
UPI00037135131.360e-3248.39MgtC/SapB family protein n=1 Tax=Longispora albida... [more]
UPI0005254C637.900e-3044.29MgtC/SapB family protein n=2 Tax=Dactylosporangium... [more]
A0A8J8GYT1_9ACTN4.480e-2945.16MgtC/SapB family protein n=2 Tax=Hamadaea sp. TaxI... [more]
UPI00167C803B8.340e-2947.09Uncharacterized protein n=2 Tax=Dactylosporangium ... [more]
A0A7W1JVE9_9ACTN9.450e-2942.49MgtC/SapB family protein n=1 Tax=Actinomycetia bac... [more]
A0A537TWH0_9ACTN1.850e-2850.67MgtC/SapB family protein n=1 Tax=Actinomycetia bac... [more]
A0A7Y6CKL5_9ACTN2.230e-2844.92MgtC/SapB family protein n=2 Tax=Actinomycetia Tax... [more]
UPI001834904A7.500e-2843.55MgtC/SapB family protein n=1 Tax=Hamadaea sp. TaxI... [more]
UPI000370295F9.000e-2845.08MgtC/SapB family protein n=1 Tax=Catelliglobosispo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003416MgtC/SapB/SrpB/YhiD familyPRINTSPR01837MGTCSAPBPROTcoord: 173..195
score: 65.94
coord: 146..164
score: 47.02
coord: 200..224
score: 57.73
IPR003416MgtC/SapB/SrpB/YhiD familyPFAMPF02308MgtCcoord: 140..246
e-value: 7.6E-29
score: 100.6
IPR003416MgtC/SapB/SrpB/YhiD familyPANTHERPTHR33778PROTEIN MGTCcoord: 138..326
NoneNo IPR availablePANTHERPTHR33778:SF1MAGNESIUM TRANSPORTER YHID-RELATEDcoord: 138..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:52213..55493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337204mRNA_11013Tribonema minus UTEX_B_3156 mRNAContig_88 52213..55493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337204|MIX45967_2_18 ID=Trimin1|337204|MIX45967_2_18|Name=jgi.p|Trimin1|337204|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
MRGPHMARLSVCQMLSICTVCLMVIITRPRCGICLSMCQMLSACAVCCDG
DAHQATMRRPHLARLSVCVRCSAFVPFALMVMIIRPRCGPCLSMCQMLSA
SPFAVMAMLIRPRCGARIWHVSPCVSDAQRLPRLPLWRCSSGHDAGLRTH
ILVCLGASLFTLSGAVSKNTNVDETRIAAQVVSGIGFLGAGAIVREGLWV
RGLTTAAALWVTAAMGVALGLGAYASAGLTMALVMVTLAGLQQLEDRVFY
TWRRRIVMLDLVPNQPPSAVVVPALKALGSAHVSAVTALANGAKRLRISS
RLRLNENLPLLAETLMGIEGVAGVEILHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003416MgtC/SapB/SrpB/YhiD_fam