Trimin1|182350|e_gw1.437.4.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|182350
Unique NameTrimin1|182350|e_gw1.437.4.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length57
Homology
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A0A835YV36_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV36_9STRA)

HSP 1 Score: 123 bits (308), Expect = 7.480e-36
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 MAGERCPQLPPDRSTASHSNSNSTSKQPQTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            MAGERCPQLPPDRSTASHSNSNSTSKQPQTPVIRIWGSTPAGQKACLHLHGIYPYFY
Sbjct:    1 MAGERCPQLPPDRSTASHSNSNSTSKQPQTPVIRIWGSTPAGQKACLHLHGIYPYFY 57          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A0A8K1C3N0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3N0_PYTOL)

HSP 1 Score: 57.4 bits (137), Expect = 3.640e-8
Identity = 21/29 (72.41%), Postives = 28/29 (96.55%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            Q PV+R++G+TPAGQKACLH+HG++PYFY
Sbjct:   44 QVPVMRVFGATPAGQKACLHIHGLFPYFY 72          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: UPI001C8A68B4 (LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8A68B4)

HSP 1 Score: 57.4 bits (137), Expect = 3.650e-8
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            + PV+RIWG+TPAGQK CLHLHG++PY Y
Sbjct:   34 KVPVVRIWGATPAGQKTCLHLHGMFPYIY 62          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: UPI001CF98815 (DNA polymerase zeta catalytic subunit n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF98815)

HSP 1 Score: 57.4 bits (137), Expect = 3.650e-8
Identity = 22/29 (75.86%), Postives = 28/29 (96.55%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            + PV+RI+GSTPAGQK+CLH+HGI+PYFY
Sbjct:   34 KVPVVRIFGSTPAGQKSCLHVHGIFPYFY 62          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: UPI00071E515F (DNA polymerase zeta catalytic subunit-like n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071E515F)

HSP 1 Score: 56.2 bits (134), Expect = 4.500e-8
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            Q PVIRI+GSTPAGQK CLH+HG++PY Y
Sbjct:   29 QVPVIRIFGSTPAGQKTCLHVHGVFPYLY 57          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A0A0L8G8L4_OCTBM (DNA_pol_B_exo1 domain-containing protein n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8G8L4_OCTBM)

HSP 1 Score: 56.2 bits (134), Expect = 5.280e-8
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            Q PVIRI+GSTPAGQK CLH+HG++PY Y
Sbjct:   29 QVPVIRIFGSTPAGQKTCLHVHGVFPYLY 57          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A0A1X2HB89_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HB89_SYNRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.800e-8
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 0
Query:   23 STSKQPQTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            ST    + PVIRI+GSTPAGQKACLH+H  YPYFY
Sbjct:   48 STEPLTKVPVIRIFGSTPAGQKACLHIHQAYPYFY 82          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A0A6G0XLP9_9STRA (DNA polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLP9_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.810e-8
Identity = 21/29 (72.41%), Postives = 27/29 (93.10%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            + PV+RI+G+TPAGQK C+H+HGIYPYFY
Sbjct:   40 KVPVVRIFGATPAGQKCCVHIHGIYPYFY 68          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A0A6I8PC21_ORNAN (DNA polymerase zeta catalytic subunit n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8PC21_ORNAN)

HSP 1 Score: 56.6 bits (135), Expect = 6.840e-8
Identity = 21/30 (70.00%), Postives = 27/30 (90.00%), Query Frame = 0
Query:   28 PQTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            P+ PV+R++G+TPAGQK CLHLHGI+PY Y
Sbjct:   33 PKVPVVRVFGATPAGQKTCLHLHGIFPYLY 62          
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Match: A8IZI7_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IZI7_CHLRE)

HSP 1 Score: 54.3 bits (129), Expect = 8.720e-8
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0
Query:   29 QTPVIRIWGSTPAGQKACLHLHGIYPYFY 57
            Q PVIRI+GSTPAGQKAC+H+H  +PYFY
Sbjct:   41 QVPVIRIFGSTPAGQKACVHVHRAFPYFY 69          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|182350 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YV36_9STRA7.480e-36100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A8K1C3N0_PYTOL3.640e-872.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI001C8A68B43.650e-872.41LOW QUALITY PROTEIN: DNA polymerase zeta catalytic... [more]
UPI001CF988153.650e-875.86DNA polymerase zeta catalytic subunit n=1 Tax=Prot... [more]
UPI00071E515F4.500e-875.86DNA polymerase zeta catalytic subunit-like n=1 Tax... [more]
A0A0L8G8L4_OCTBM5.280e-875.86DNA_pol_B_exo1 domain-containing protein n=1 Tax=O... [more]
A0A1X2HB89_SYNRA6.800e-871.43Uncharacterized protein n=1 Tax=Syncephalastrum ra... [more]
A0A6G0XLP9_9STRA6.810e-872.41DNA polymerase n=1 Tax=Aphanomyces euteiches TaxID... [more]
A0A6I8PC21_ORNAN6.840e-870.00DNA polymerase zeta catalytic subunit n=2 Tax=Orni... [more]
A8IZI7_CHLRE8.720e-875.86Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.342.10DNA Polymerase, chain B, domain 1coord: 19..57
e-value: 2.5E-9
score: 38.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..31
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 26..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_437contigContig_437:12583..12753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182350mRNA_18869Tribonema minus UTEX_B_3156 mRNAContig_437 12583..12753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|182350|e_gw1.437.4.1 ID=Trimin1|182350|e_gw1.437.4.1|Name=jgi.p|Trimin1|182350|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=57bp
MAGERCPQLPPDRSTASHSNSNSTSKQPQTPVIRIWGSTPAGQKACLHLH
GIYPYFY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf