Trimin1|182342|e_gw1.436.22.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|182342
Unique NameTrimin1|182342|e_gw1.436.22.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length88
Homology
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A4P6HBB4_9HYPH (ATP-dependent Clp protease proteolytic subunit n=5 Tax=cellular organisms TaxID=131567 RepID=A0A4P6HBB4_9HYPH)

HSP 1 Score: 172 bits (436), Expect = 6.650e-53
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI
Sbjct:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A0Q7WNC0_9HYPH (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mesorhizobium sp. Root554 TaxID=1736557 RepID=A0A0Q7WNC0_9HYPH)

HSP 1 Score: 163 bits (413), Expect = 2.070e-49
Identity = 78/88 (88.64%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG+ANLVPMVIEQSSRGERAFDIFSRLLRERIIF+NGQIED MAA++CAQ+LSLEADNP+KE+SLYINSPGGVV+SGFAIYDTMRY+
Sbjct:    1 MSGLANLVPMVIEQSSRGERAFDIFSRLLRERIIFINGQIEDGMAALVCAQILSLEADNPDKEISLYINSPGGVVTSGFAIYDTMRYV 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: UPI000FD3D898 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 TaxID=2496651 RepID=UPI000FD3D898)

HSP 1 Score: 159 bits (402), Expect = 4.410e-49
Identity = 76/88 (86.36%), Postives = 86/88 (97.73%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG+ANLVPMVIEQSSRGERAFDIFSRLLRERIIF+NG+I D M+A++CAQLLSLE+DNP+KE+SLYINSPGGVV+SGFAIYDTMRYI
Sbjct:    1 MSGLANLVPMVIEQSSRGERAFDIFSRLLRERIIFINGEINDGMSALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMRYI 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A1I7AVB0_9HYPH (ATP-dependent Clp protease proteolytic subunit n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A1I7AVB0_9HYPH)

HSP 1 Score: 157 bits (397), Expect = 5.720e-47
Identity = 74/88 (84.09%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG++NLVPMVIEQSSRGERAFDIFSRLLRERIIF+NG I+DN++A++CAQLLSLE+DNP+KE++LYINSPGGVVSSGFAIYDTM+YI
Sbjct:    1 MSGISNLVPMVIEQSSRGERAFDIFSRLLRERIIFINGPIDDNVSALVCAQLLSLESDNPKKEIALYINSPGGVVSSGFAIYDTMQYI 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A271LMC6_9HYPH (ATP-dependent Clp protease proteolytic subunit n=12 Tax=Mesorhizobium TaxID=68287 RepID=A0A271LMC6_9HYPH)

HSP 1 Score: 157 bits (396), Expect = 7.880e-47
Identity = 74/88 (84.09%), Postives = 86/88 (97.73%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG ANLVPMVIEQSSRGERAFDIFSRLLRERI+F+NG I+DN++A++CAQLLSLE+DNP+KE+SLYINSPGGVV+SGFAIYDTM+YI
Sbjct:    1 MSGFANLVPMVIEQSSRGERAFDIFSRLLRERIVFINGPIDDNVSALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMQYI 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: X6HJB1_9HYPH (ATP-dependent Clp protease proteolytic subunit n=42 Tax=Mesorhizobium TaxID=68287 RepID=X6HJB1_9HYPH)

HSP 1 Score: 157 bits (396), Expect = 8.110e-47
Identity = 75/88 (85.23%), Postives = 85/88 (96.59%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG ANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNG+I D M+A++CAQLLSLE+DNP+KE+SLYINSPGGVV+SGFAIYDTM+Y+
Sbjct:    1 MSGFANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGEINDGMSALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMQYV 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A1C2DI28_9HYPH (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mesorhizobium hungaricum TaxID=1566387 RepID=A0A1C2DI28_9HYPH)

HSP 1 Score: 154 bits (390), Expect = 6.410e-46
Identity = 72/88 (81.82%), Postives = 84/88 (95.45%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MS +ANLVPMVIEQSSRGER FDIFSRLLRERIIFVNG++ D M+A++CAQLLSLE+DNP+KE+SLYINSPGGVV++GFAIYDTMRY+
Sbjct:    1 MSAIANLVPMVIEQSSRGERTFDIFSRLLRERIIFVNGEVNDTMSALVCAQLLSLESDNPDKEISLYINSPGGVVTAGFAIYDTMRYV 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: CLPP1_RHILO (ATP-dependent Clp protease proteolytic subunit 1 n=105 Tax=Bacteria TaxID=2 RepID=CLPP1_RHILO)

HSP 1 Score: 154 bits (389), Expect = 9.090e-46
Identity = 72/88 (81.82%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG+A+LVPMVIEQSSRGERAFDIFSRLLRERIIF+NG+I D+++A++CAQLLSLE+DNP+KE+SLYINSPGGVV+SGFAIYDTM+Y+
Sbjct:    1 MSGLASLVPMVIEQSSRGERAFDIFSRLLRERIIFINGEINDDVSALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMQYV 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A316CUU5_PSESE (ATP-dependent Clp protease proteolytic subunit n=3 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A316CUU5_PSESE)

HSP 1 Score: 153 bits (386), Expect = 2.670e-45
Identity = 73/88 (82.95%), Postives = 85/88 (96.59%), Query Frame = 0
Query:    1 MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            MSG +NLVPMVIEQSSRGERAFDIFSRLLRERIIF+NG I+D+++A++CAQLLSLE+DNP+KE+SLYINSPGGVVSSG AIYDTM+YI
Sbjct:    1 MSGTSNLVPMVIEQSSRGERAFDIFSRLLRERIIFINGPIDDSVSALVCAQLLSLESDNPKKEISLYINSPGGVVSSGLAIYDTMQYI 88          
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Match: A0A1M2YR33_9HYPH (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhizobiales bacterium 65-79 TaxID=1895815 RepID=A0A1M2YR33_9HYPH)

HSP 1 Score: 151 bits (381), Expect = 1.490e-44
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 0
Query:    6 NLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICAQLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI 88
            NLVPMVIEQSSRGERAFDIFSRLLRERIIFVNG IED MAA++CAQLLSLE+DNP KEV+LYINSPGG+V+SGFAIYDTMRYI
Sbjct:    4 NLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGPIEDGMAALVCAQLLSLESDNPNKEVALYINSPGGMVTSGFAIYDTMRYI 86          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|182342 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P6HBB4_9HYPH6.650e-53100.00ATP-dependent Clp protease proteolytic subunit n=5... [more]
A0A0Q7WNC0_9HYPH2.070e-4988.64ATP-dependent Clp protease proteolytic subunit n=1... [more]
UPI000FD3D8984.410e-4986.36ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A1I7AVB0_9HYPH5.720e-4784.09ATP-dependent Clp protease proteolytic subunit n=3... [more]
A0A271LMC6_9HYPH7.880e-4784.09ATP-dependent Clp protease proteolytic subunit n=1... [more]
X6HJB1_9HYPH8.110e-4785.23ATP-dependent Clp protease proteolytic subunit n=4... [more]
A0A1C2DI28_9HYPH6.410e-4681.82ATP-dependent Clp protease proteolytic subunit n=1... [more]
CLPP1_RHILO9.090e-4681.82ATP-dependent Clp protease proteolytic subunit 1 n... [more]
A0A316CUU5_PSESE2.670e-4582.95ATP-dependent Clp protease proteolytic subunit n=3... [more]
A0A1M2YR33_9HYPH1.490e-4489.16ATP-dependent Clp protease proteolytic subunit n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 23..38
score: 53.59
coord: 63..83
score: 57.26
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 23..88
e-value: 1.4381E-34
score: 114.076
NoneNo IPR availableGENE3D3.90.226.10coord: 2..88
e-value: 1.1E-32
score: 115.2
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIALcoord: 6..88
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 17..88
e-value: 4.7E-27
score: 95.0
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 6..88
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 7..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_436contigContig_436:17539..17802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182342mRNA_18007Tribonema minus UTEX_B_3156 mRNAContig_436 17539..17802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|182342|e_gw1.436.22.1 ID=Trimin1|182342|e_gw1.436.22.1|Name=jgi.p|Trimin1|182342|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=88bp
MSGVANLVPMVIEQSSRGERAFDIFSRLLRERIIFVNGQIEDNMAAIICA
QLLSLEADNPEKEVSLYINSPGGVVSSGFAIYDTMRYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR029045ClpP/crotonase-like_dom_sf