Trimin1|182095|e_gw1.353.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|182095
Unique Name	Trimin1\|182095\|e_gw1.353.16.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	157

Homology

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A836CD06_9STRA (Endoribonuclease L-PSP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD06_9STRA)

HSP 1 Score: 301 bits (772), Expect = 1.710e-103
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA 156
            MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA
Sbjct:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA 156

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A651G304_9HYPH (RidA family protein n=1 Tax=Salinarimonadaceae bacterium TaxID=2448058 RepID=A0A651G304_9HYPH)

HSP 1 Score: 214 bits (544), Expect = 9.550e-69
Identity = 104/153 (67.97%), Postives = 124/153 (81.05%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIF 153
            M  ++ RL E G+ LP AAAPVANYVP VR GDL+FISGQ+C G DGAI PAH+GKLG  VSE  GRAAARV  +N++AQL+ A+GD DRV RCVRL G+IN  PD+  +PQ+MNGASDLMV  FG+ GRHAR+T+GVAQLPLD+AVEVEG+F
Sbjct:    1 MGAIDSRLAELGIALPPAAAPVANYVPFVRAGDLVFISGQLCLGADGAIDPAHKGKLGAQVSEEAGRAAARVCAINLVAQLRAAIGDLDRVTRCVRLGGFINCTPDFGPVPQVMNGASDLMVEIFGDKGRHARSTIGVAQLPLDAAVEVEGVF 153

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: UPI00166750AF (RidA family protein n=2 Tax=Salinarimonas TaxID=690086 RepID=UPI00166750AF)

HSP 1 Score: 212 bits (539), Expect = 6.080e-68
Identity = 107/153 (69.93%), Postives = 123/153 (80.39%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIF 153
            MS +E RL E GL LP AAAPVANYVP VR GDL+ ISGQIC G DG +APAH GKLG  VS  DG+AAAR+  LN+LAQLK AVGD D V RCVRL G+INA PD+ A+ Q+MNGASDLMV A GE GRHAR+T+GVA+LP+D+AVEVEG+F
Sbjct:    1 MSRIEDRLAEKGLSLPQAAAPVANYVPYVRTGDLVVISGQICLGSDGKLAPAHVGKLGGEVSMEDGQAAARLCALNLLAQLKAAVGDLDEVVRCVRLGGFINARPDFAAIAQVMNGASDLMVEAMGEAGRHARSTIGVAELPMDAAVEVEGMF 153

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A0P7X6T0_9HYPH (Putative translation initiation inhibitor, yjgF family n=1 Tax=Saliniramus fredricksonii TaxID=1653334 RepID=A0A0P7X6T0_9HYPH)

HSP 1 Score: 206 bits (523), Expect = 1.770e-65
Identity = 102/150 (68.00%), Postives = 120/150 (80.00%), Query Frame = 0

Query:    4 VERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIF 153
            +E RL E G+ LP+ AAPVANYVP VR G+L+ ISGQIC G DG IAPAH+GKLGD V E  GRAAAR   +N+LAQL+ A+GD D V R VRL G+IN  PDY A+ Q+MNGASDLMV AFG+ GRHAR+T+GVAQLPLD+AVEVEG+F
Sbjct:    9 IEARLAEIGISLPTPAAPVANYVPFVRSGNLVIISGQICLGPDGKIAPAHQGKLGDVVDETAGRAAARACAINLLAQLRAAIGDLDAVTRVVRLGGFINCVPDYGAVAQVMNGASDLMVEAFGDVGRHARSTIGVAQLPLDAAVEVEGMF 158

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A4Q1KM55_9SPHN (RidA family protein n=1 Tax=Sphingobium fluviale TaxID=2506423 RepID=A0A4Q1KM55_9SPHN)

HSP 1 Score: 198 bits (503), Expect = 1.660e-62
Identity = 100/156 (64.10%), Postives = 118/156 (75.64%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA 156
            MS +E RL   G+ LP A AP ANYVPAVR G+L+ ISGQ+CFG DG +A  H+GKLG  +S+  G+ AAR+  LN++AQLK  VGD D + RCVRL G+INAAPDY  LP IMNGASDLMV  FGE GRHAR+TVGVA LP D AVEVEG+F +A
Sbjct:    1 MSLIEDRLTHLGITLPPAPAPAANYVPAVRTGNLVVISGQVCFGADGMLADRHKGKLGAGMSDEAGKEAARLCALNLIAQLKAVVGDLDTITRCVRLGGFINAAPDYTPLPAIMNGASDLMVEIFGEAGRHARSTVGVAVLPFDCAVEVEGMFEVA 156

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: UPI00166DB703 (RidA family protein n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI00166DB703)

HSP 1 Score: 197 bits (502), Expect = 2.360e-62
Identity = 94/156 (60.26%), Postives = 125/156 (80.13%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA 156
            MS++E +L + G+RLP+ AAP+ANY+P VR G L+ +SGQ+C G DG ++ AHRGKLG  VS  DG+AAAR+  +NVLAQ + A+GD D++ARCVRL G+INA P++ AL  +MNGASDLMV A G+ GRHAR+T+GVA+LPLD+AVEVE +F +A
Sbjct:    1 MSQIEAKLADVGIRLPTPAAPLANYLPCVRTGSLLIVSGQLCTGVDGKLSDAHRGKLGAEVSLEDGQAAARLCAINVLAQARAAIGDLDQIARCVRLGGFINALPNFSALAAVMNGASDLMVTALGDRGRHARSTIGVAELPLDAAVEVEAMFEIA 156

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A5B2VZ46_9HYPH (RidA family protein n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2VZ46_9HYPH)

HSP 1 Score: 197 bits (500), Expect = 4.750e-62
Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIF 153
            MS V+ +L E G+ LP AAAPVA+YVP VR G+LI ISGQIC G DG ++PAH GKLG  +S   GR AAR+  +N+LAQLK AVGD DRV RCVRL G+IN  P + A+ Q+MNGASDLMV   GE GRHAR+T+GVA+LPLD+AVEVEG+F
Sbjct:    1 MSAVDTKLAELGITLPKAAAPVADYVPFVRTGNLIVISGQICLGPDGKLSPAHTGKLGAEISPEAGREAARLCAINLLAQLKAAVGDLDRVVRCVRLGGFINVVPTFAAVAQVMNGASDLMVDVLGEAGRHARSTIGVAELPLDAAVEVEGMF 153

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A2U8VT31_9HYPH (YjgF_endoribonc domain-containing protein n=5 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A2U8VT31_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 1.990e-61
Identity = 104/156 (66.67%), Postives = 120/156 (76.92%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDR-VARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAM 155
            MS ++ RL   GL LP AAAPVANYVP VR G+L+ ISGQICFG DG +AP H GKLGDTVS   G AAAR+  LNVLAQL+ AVGD DR V +CVRL G+INA P +  L  IMNGASDLMV   G+ GRHAR+TVGVA+LPLD+AVEVE +FA+
Sbjct:    1 MSSIKERLQALGLALPKAAAPVANYVPFVRTGNLVVISGQICFGPDGKLAPEHTGKLGDTVSNEAGIAAARLCALNVLAQLEAAVGDLDRAVDQCVRLGGFINAVPTFAGLAPIMNGASDLMVEVLGDRGRHARSTVGVAELPLDAAVEVEAMFAV 156

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A5N8AEE1_9SPHN (RidA family protein n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=A0A5N8AEE1_9SPHN)

HSP 1 Score: 194 bits (492), Expect = 7.830e-61
Identity = 100/156 (64.10%), Postives = 119/156 (76.28%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA 156
            MS +E  L + G+ LP+  APVANYVP V+ G+LI+ISGQIC G  G IA AH+GKLG +VS+  GR AAR+  +N+LAQLK AVGDF  V RC+RL G+IN+ PDY AL  IMNGASDLMV   GE GRHAR+TVGVA+LPLD AVEVE IF +A
Sbjct:    1 MSMIEHNLTQLGITLPTPLAPVANYVPYVQSGNLIYISGQICAGAGGTIADAHKGKLGGSVSDEAGREAARLCVINILAQLKAAVGDFSNVKRCIRLGGFINSMPDYAALAPIMNGASDLMVEVMGEAGRHARSTVGVAELPLDCAVEVEAIFEVA 156

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BLAST of jgi.p|Trimin1|182095 vs. uniprot
Match: A0A1Q4C1V0_9HYPH (YjgF_endoribonc domain-containing protein n=1 Tax=Rhizobiales bacterium 62-47 TaxID=1895811 RepID=A0A1Q4C1V0_9HYPH)

HSP 1 Score: 193 bits (491), Expect = 1.220e-60
Identity = 99/157 (63.06%), Postives = 128/157 (81.53%), Query Frame = 0

Query:    1 MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIAPAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVG-DFDRVARCVRLCGYINAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVEGIFAMA 156
            MS++E  L +AG+ LP+ AAPVANYV AV  G+L+ ISGQ+C G +GA+  AH+GKLGDTVS   G+AAAR+  +N+LAQ KLA+G + DR+ RCVRL G+INA P Y+A+PQ+MNGASD+MV A G++GRHAR+TVGVAQLPL+ AVEVEG+F +A
Sbjct:    1 MSKIENNLKQAGIVLPTPAAPVANYVGAVICGNLLVISGQLCLGANGAVDSAHQGKLGDTVSLEVGQAAARLCAINLLAQAKLALGGNLDRLRRCVRLGGFINATPTYEAIPQVMNGASDMMVKAMGDSGRHARSTVGVAQLPLNCAVEVEGMFEIA 157

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|182095 vs. uniprot

BLAST of jgi.p|Trimin1|182095 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CD06_9STRA	1.710e-103	100.00	Endoribonuclease L-PSP n=1 Tax=Tribonema minus Tax...	[more]
A0A651G304_9HYPH	9.550e-69	67.97	RidA family protein n=1 Tax=Salinarimonadaceae bac...	[more]
UPI00166750AF	6.080e-68	69.93	RidA family protein n=2 Tax=Salinarimonas TaxID=69...	[more]
A0A0P7X6T0_9HYPH	1.770e-65	68.00	Putative translation initiation inhibitor, yjgF fa...	[more]
A0A4Q1KM55_9SPHN	1.660e-62	64.10	RidA family protein n=1 Tax=Sphingobium fluviale T...	[more]
UPI00166DB703	2.360e-62	60.26	RidA family protein n=1 Tax=Chelatococcus reniform...	[more]
A0A5B2VZ46_9HYPH	4.750e-62	64.71	RidA family protein n=1 Tax=Salinarimonas soli Tax...	[more]
A0A2U8VT31_9HYPH	1.990e-61	66.67	YjgF_endoribonc domain-containing protein n=5 Tax=...	[more]
A0A5N8AEE1_9SPHN	7.830e-61	64.10	RidA family protein n=1 Tax=Sphingobium sp. TaxID=...	[more]
A0A1Q4C1V0_9HYPH	1.220e-60	63.06	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 1..155 e-value: 8.5E-55 score: 186.6
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 1..154
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 5..153 e-value: 5.9E-37 score: 127.1
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	CDD	cd02199	YjgF_YER057c_UK114_like_1	coord: 10..154 e-value: 1.16941E-66 score: 197.297
None	No IPR available	PANTHER	PTHR43760	ENDORIBONUCLEASE-RELATED	coord: 1..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_353	contig	Contig_353:6491..6961 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|182095	mRNA_18560	Tribonema minus UTEX_B_3156	mRNA	Contig_353 6491..6961 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|182095|e_gw1.353.16.1 ID=Trimin1|182095|e_gw1.353.16.1|Name=jgi.p|Trimin1|182095|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp
MSEVERRLIEAGLRLPSAAAPVANYVPAVRVGDLIFISGQICFGEDGAIA
PAHRGKLGDTVSEADGRAAARVAGLNVLAQLKLAVGDFDRVARCVRLCGY
INAAPDYDALPQIMNGASDLMVLAFGETGRHARTTVGVAQLPLDSAVEVE
GIFAMA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like