Trimin1|179758|e_gw1.201.12.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|179758
Unique NameTrimin1|179758|e_gw1.201.12.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length228
Homology
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A835Z2T9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T9_9STRA)

HSP 1 Score: 454 bits (1167), Expect = 2.260e-161
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query:    1 MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVLSDDDKLG 227
            MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVLSDDDKLG
Sbjct:    1 MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVLSDDDKLG 227          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A836C7Y9_9STRA (Solute:Sodium symporter family (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y9_9STRA)

HSP 1 Score: 247 bits (631), Expect = 4.190e-80
Identity = 122/201 (60.70%), Postives = 152/201 (75.62%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 219
            CCQ   CNIPCPA+W P A L+T YG++ V +I+++C+ G+V    VRG +E+YFVAGR L L V TL LA Q IDSNA LG  D AYKY ++DGAV+ +GL  SL+LN LL+A+H+N A  LT+PDFYAR+YG LFEVLVSLVLCT+FI +LAGNLVG GR+L FC+  L + GGV  +A L ASYT+GGGL SV+  GV
Sbjct:    3 CCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGV 203          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A835YRZ9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ9_9STRA)

HSP 1 Score: 259 bits (663), Expect = 3.640e-79
Identity = 130/202 (64.36%), Postives = 154/202 (76.24%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 220
            CCQ + CNIPCPA+W P A+L   YG A V +I ++C+ G      VRG +E YFVAGR L L V TL LA Q IDSNA LG  D AYK+ ++DGA +PIGL  SL+LNGLLLA+H+N A  LTLPDFYAR YG LFEVLVSLVLCT+FI +LAGNLVGLGR+LQFC+GG+S+AGGV  +A L ASYT+GGGL SVVY  V+
Sbjct:   19 CCQKSACNIPCPAEWSPSANLAEVYGVANVCAIAVYCLIGFYFLWKVRGKVENYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKFAWFDGAALPIGLGVSLILNGLLLARHVNNACCLTLPDFYARKYGKLFEVLVSLVLCTSFISLLAGNLVGLGRILQFCFGGISKAGGVWVAAALCASYTIGGGLVSVVYADVV 220          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: D7FZ36_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ36_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.910e-64
Identity = 105/200 (52.50%), Postives = 135/200 (67.50%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTG 218
            C Q   C +PCPA+W P+A L   YG AV+ SI  F   G+     ++G +E +FV GR L L V  L LA+Q IDSNA LG  D AYK+++WDGAV+P+GL  SLV+NGL +A+HIN A  LTLPDFY + +GP  EVLVSL+ C +FIC+LAGNLVGL  +++F +GG   A  V  + ++T  YT  GGL SV YTG
Sbjct:    5 CDQLDTCGLPCPAEWTPKADLVEVYGVAVIVSIAFFVSIGVATIFLIKGKVENFFVGGRSLPLFVIALTLASQSIDSNATLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGG-ELATSVFIAGIVTMIYTGAGGLLSVAYTG 203          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A6H5KJW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW0_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 4.350e-59
Identity = 105/201 (52.24%), Postives = 135/201 (67.16%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 219
            C Q   C +PCPA+W P+A L   YG AV+ SI  F   G+     ++G +E +FV GR L L V  L LA+Q IDSNA LG  D AYK+++WDGAV+P+GL  SLV+NGL +A+HIN A  LTLPDFY + +GP  EVLVSL+ C +FIC+LAGNLVGL  +++F +GG   A  V  + ++T  YT  GGL SV YT V
Sbjct:    5 CDQLDTCGLPCPAEWIPKADLVEVYGVAVIVSIAFFVSIGVATIFLIKGKVENFFVGGRSLPLFVIALTLASQSIDSNATLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGG-ELATSVFIAGIVTMIYTGAGGLLSVAYTDV 204          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A7S3K6Q6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6Q6_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.400e-52
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 219
            CCQ  +C IPC AD QP A    +YG  ++ +++ FC  GIV    ++G    +FV GR L L V TL LA+QC+DSN++LG  D +YKY+FWDGA +P+GL  SL+LNGL LA+H+N A +LTLPD +AR YG   EV+   V   +F  +LAGNLVG G +L F +G +S   G+  S +L   YT+ GG+ SV Y+ +
Sbjct:   48 CCQFDICGIPCSADDQPVAD---WYGVVIIIAVIFFCAIGIVASFGIKGDYTNFFVGGRTLSLPVVTLTLASQCVDSNSVLGNADLSYKYHFWDGACLPLGLGLSLILNGLFLARHMNRAGLLTLPDLWARKYGKAAEVIGGSVCIVSFCALLAGNLVGCGTILAFLFG-VSLKEGILISGILMFLYTVCGGILSVAYSDI 244          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A7S3ZPW5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPW5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.740e-50
Identity = 97/199 (48.74%), Postives = 127/199 (63.82%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYT 217
            CCQ  VC +PC     P+ +   FYG +V  ++  FC  G+V    V G   ++FVAGR L L +  + LA+QCID+NA+LG  D +Y Y+F+DGAV+PIGL  SL+LNGL LAK IN   +LTLPD YAR YG L EVL SL+   +FI +LAGNLVG G++L + Y  +    G+  S L+   YT  GGL SV Y+
Sbjct:  129 CCQFDVCGLPCAQPHDPK-NAPKFYGRSVAMAVAAFCAIGLVASYYVGGDTAKFFVAGRTLPLPIVVMTLASQCIDANAVLGNADLSYWYHFYDGAVLPIGLGLSLILNGLFLAKPINEMKLLTLPDLYARKYGRLTEVLGSLICTASFIALLAGNLVGCGKILAYLYPTVPLKAGIVTSGLVMLLYTAAGGLVSVAYS 326          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: K8FEG1_9CHLO (Solute:Sodium symporter family n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FEG1_9CHLO)

HSP 1 Score: 183 bits (464), Expect = 3.600e-50
Identity = 105/213 (49.30%), Postives = 134/213 (62.91%), Query Frame = 0
Query:    8 PALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 220
            P+LP       CCQ  VC IPCPA   P+   D  +G  V+  ++LFCM GI     V G  + +FVAGR L L V  L LA+Q IDSNALLG  D +YK+ F+DGAV+PIGL  SL+LN L  AK +NA  VLTLPD Y + YG   E++ SLVLC +F+C+LAGNLVG+ ++L + +  L    GV  S ++   YT  GGL SV YT V+
Sbjct:   62 PSLPTAGS---CCQMDVCAIPCPAT-VPKPDSD--FGIGVICVVVLFCMIGIGTVYFVGGKAKNFFVAGRSLPLPVVILTLASQSIDSNALLGNADLSYKFAFFDGAVLPIGLGLSLILNALFFAKKMNAEGVLTLPDVYGKRYGVATEIIASLVLCCSFLCLLAGNLVGMAKILAYLFD-LDITDGVFLSGIIILVYTACGGLFSVAYTDVI 267          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: C1E525_MICCC (Solute:Sodium symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E525_MICCC)

HSP 1 Score: 179 bits (455), Expect = 6.980e-49
Identity = 102/212 (48.11%), Postives = 131/212 (61.79%), Query Frame = 0
Query:   12 AGEDGPL---CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 220
            AG   PL   CCQ  VC IPCPA     AS    +G  +   I  FC  G+     V G  E +FVAGR L L V TL LA+Q IDSNALLG  D +YKY+F+DGAV+PIGL  SL+LNG+ LA  +N   VLTLPD Y + YG   E++ S+  C +F+C+LAGNLVG+  +L + +  +S+ G V  S ++  +YT  GGL SV YT V+
Sbjct:   41 AGAPIPLANSCCQMDVCAIPCPAAHPKPAS---GFGVGIGIMIAFFCAIGLGAFYFVGGKAENFFVAGRSLPLFVVTLTLASQSIDSNALLGNADLSYKYHFYDGAVLPIGLGLSLILNGIFLAHKVNEELVLTLPDIYGKKYGKAVEIVTSICTCCSFLCLLAGNLVGMSVILAYIFD-ISEVGAVFLSGIICLAYTACGGLFSVAYTDVV 248          
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A8J6CCI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI3_DIALT)

HSP 1 Score: 179 bits (454), Expect = 7.120e-49
Identity = 101/202 (50.00%), Postives = 128/202 (63.37%), Query Frame = 0
Query:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 220
            CCQ  VC +PC A   P       +  AV  +I +FC+ G      V G  E +FVAGR L L V  L LAAQ IDSNALLG  D +YK++FWDGAV+PIGL  SL++NG+ LA+ I+  +VLTLP+ YAR YGP+ EV VS V C +FI +LAGNLVG+  VL +  GG+ Q   V  S  +   YT+ GGL SV +T V+
Sbjct:   46 CCQKDVCGLPCAA---PPPVPKVGFVIAVGVAIAIFCLIGFASYFFVGGKTENFFVAGRSLPLPVIALTLAAQSIDSNALLGNADLSYKFHFWDGAVLPIGLGLSLIINGVFLARFIHRENVLTLPEIYARYYGPVVEVCVSFVCCASFISLLAGNLVGMAAVLGYL-GGIDQTTAVFVSGTVLFVYTVSGGLFSVAFTDVV 243          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2T9_9STRA2.260e-161100.00Solute:Sodium symporter family n=1 Tax=Tribonema m... [more]
A0A836C7Y9_9STRA4.190e-8060.70Solute:Sodium symporter family (Fragment) n=1 Tax=... [more]
A0A835YRZ9_9STRA3.640e-7964.36Solute:Sodium symporter family n=1 Tax=Tribonema m... [more]
D7FZ36_ECTSI1.910e-6452.50Solute:Sodium symporter family n=1 Tax=Ectocarpus ... [more]
A0A6H5KJW0_9PHAE4.350e-5952.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3K6Q6_9STRA3.400e-5247.76Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZPW5_9STRA1.740e-5048.74Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
K8FEG1_9CHLO3.600e-5049.30Solute:Sodium symporter family n=1 Tax=Bathycoccus... [more]
C1E525_MICCC6.980e-4948.11Solute:Sodium symporter family n=2 Tax=Micromonas ... [more]
A0A8J6CCI3_DIALT7.120e-4950.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001734Sodium/solute symporterPFAMPF00474SSFcoord: 72..220
e-value: 3.6E-14
score: 52.5
IPR001734Sodium/solute symporterPROSITEPS50283NA_SOLUT_SYMP_3coord: 40..227
score: 17.789604
IPR038377Sodium/glucose symporter superfamilyGENE3D1.20.1730.10Sodium/glucose cotransportercoord: 46..221
e-value: 3.2E-25
score: 90.3
NoneNo IPR availablePANTHERPTHR48086:SF3SODIUM/PROLINE SYMPORTERcoord: 47..219
NoneNo IPR availablePANTHERPTHR48086SODIUM/PROLINE SYMPORTER-RELATEDcoord: 47..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_201contigContig_201:99722..101285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179758mRNA_17131Tribonema minus UTEX_B_3156 mRNAContig_201 99722..101285 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|179758|e_gw1.201.12.1 ID=Trimin1|179758|e_gw1.201.12.1|Name=jgi.p|Trimin1|179758|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=228bp
MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSS
ILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLG
TVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYART
YGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASAL
LTASYTMGGGLKSVVYTGVLSDDDKLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001734Na/solute_symporter
IPR038377Na/Glc_symporter_sf