mRNA_17131 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|179758
Unique NamemRNA_17131
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A835Z2T9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T9_9STRA)

HSP 1 Score: 454 bits (1167), Expect = 2.260e-161
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1 
Query:    1 MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVLSDDDKLG 681
            MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVLSDDDKLG
Sbjct:    1 MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVLSDDDKLG 227
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A836C7Y9_9STRA (Solute:Sodium symporter family (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y9_9STRA)

HSP 1 Score: 247 bits (631), Expect = 4.190e-80
Identity = 122/201 (60.70%), Postives = 152/201 (75.62%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 657
            CCQ   CNIPCPA+W P A L+T YG++ V +I+++C+ G+V    VRG +E+YFVAGR L L V TL LA Q IDSNA LG  D AYKY ++DGAV+ +GL  SL+LN LL+A+H+N A  LT+PDFYAR+YG LFEVLVSLVLCT+FI +LAGNLVG GR+L FC+  L + GGV  +A L ASYT+GGGL SV+  GV
Sbjct:    3 CCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGV 203
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A835YRZ9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ9_9STRA)

HSP 1 Score: 259 bits (663), Expect = 3.640e-79
Identity = 130/202 (64.36%), Postives = 154/202 (76.24%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 660
            CCQ + CNIPCPA+W P A+L   YG A V +I ++C+ G      VRG +E YFVAGR L L V TL LA Q IDSNA LG  D AYK+ ++DGA +PIGL  SL+LNGLLLA+H+N A  LTLPDFYAR YG LFEVLVSLVLCT+FI +LAGNLVGLGR+LQFC+GG+S+AGGV  +A L ASYT+GGGL SVVY  V+
Sbjct:   19 CCQKSACNIPCPAEWSPSANLAEVYGVANVCAIAVYCLIGFYFLWKVRGKVENYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKFAWFDGAALPIGLGVSLILNGLLLARHVNNACCLTLPDFYARKYGKLFEVLVSLVLCTSFISLLAGNLVGLGRILQFCFGGISKAGGVWVAAALCASYTIGGGLVSVVYADVV 220
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: D7FZ36_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ36_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.910e-64
Identity = 105/200 (52.50%), Postives = 135/200 (67.50%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTG 654
            C Q   C +PCPA+W P+A L   YG AV+ SI  F   G+     ++G +E +FV GR L L V  L LA+Q IDSNA LG  D AYK+++WDGAV+P+GL  SLV+NGL +A+HIN A  LTLPDFY + +GP  EVLVSL+ C +FIC+LAGNLVGL  +++F +GG   A  V  + ++T  YT  GGL SV YTG
Sbjct:    5 CDQLDTCGLPCPAEWTPKADLVEVYGVAVIVSIAFFVSIGVATIFLIKGKVENFFVGGRSLPLFVIALTLASQSIDSNATLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGG-ELATSVFIAGIVTMIYTGAGGLLSVAYTG 203
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A6H5KJW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW0_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 4.350e-59
Identity = 105/201 (52.24%), Postives = 135/201 (67.16%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 657
            C Q   C +PCPA+W P+A L   YG AV+ SI  F   G+     ++G +E +FV GR L L V  L LA+Q IDSNA LG  D AYK+++WDGAV+P+GL  SLV+NGL +A+HIN A  LTLPDFY + +GP  EVLVSL+ C +FIC+LAGNLVGL  +++F +GG   A  V  + ++T  YT  GGL SV YT V
Sbjct:    5 CDQLDTCGLPCPAEWIPKADLVEVYGVAVIVSIAFFVSIGVATIFLIKGKVENFFVGGRSLPLFVIALTLASQSIDSNATLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGG-ELATSVFIAGIVTMIYTGAGGLLSVAYTDV 204
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A7S3K6Q6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6Q6_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.400e-52
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 657
            CCQ  +C IPC AD QP A    +YG  ++ +++ FC  GIV    ++G    +FV GR L L V TL LA+QC+DSN++LG  D +YKY+FWDGA +P+GL  SL+LNGL LA+H+N A +LTLPD +AR YG   EV+   V   +F  +LAGNLVG G +L F +G +S   G+  S +L   YT+ GG+ SV Y+ +
Sbjct:   48 CCQFDICGIPCSADDQPVAD---WYGVVIIIAVIFFCAIGIVASFGIKGDYTNFFVGGRTLSLPVVTLTLASQCVDSNSVLGNADLSYKYHFWDGACLPLGLGLSLILNGLFLARHMNRAGLLTLPDLWARKYGKAAEVIGGSVCIVSFCALLAGNLVGCGTILAFLFG-VSLKEGILISGILMFLYTVCGGILSVAYSDI 244
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A7S3ZPW5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPW5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.740e-50
Identity = 97/199 (48.74%), Postives = 127/199 (63.82%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYT 651
            CCQ  VC +PC     P+ +   FYG +V  ++  FC  G+V    V G   ++FVAGR L L +  + LA+QCID+NA+LG  D +Y Y+F+DGAV+PIGL  SL+LNGL LAK IN   +LTLPD YAR YG L EVL SL+   +FI +LAGNLVG G++L + Y  +    G+  S L+   YT  GGL SV Y+
Sbjct:  129 CCQFDVCGLPCAQPHDPK-NAPKFYGRSVAMAVAAFCAIGLVASYYVGGDTAKFFVAGRTLPLPIVVMTLASQCIDANAVLGNADLSYWYHFYDGAVLPIGLGLSLILNGLFLAKPINEMKLLTLPDLYARKYGRLTEVLGSLICTASFIALLAGNLVGCGKILAYLYPTVPLKAGIVTSGLVMLLYTAAGGLVSVAYS 326
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: K8FEG1_9CHLO (Solute:Sodium symporter family n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FEG1_9CHLO)

HSP 1 Score: 183 bits (464), Expect = 3.600e-50
Identity = 105/213 (49.30%), Postives = 134/213 (62.91%), Query Frame = 1 
Query:   22 PALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 660
            P+LP       CCQ  VC IPCPA   P+   D  +G  V+  ++LFCM GI     V G  + +FVAGR L L V  L LA+Q IDSNALLG  D +YK+ F+DGAV+PIGL  SL+LN L  AK +NA  VLTLPD Y + YG   E++ SLVLC +F+C+LAGNLVG+ ++L + +  L    GV  S ++   YT  GGL SV YT V+
Sbjct:   62 PSLPTAGS---CCQMDVCAIPCPAT-VPKPDSD--FGIGVICVVVLFCMIGIGTVYFVGGKAKNFFVAGRSLPLPVVILTLASQSIDSNALLGNADLSYKFAFFDGAVLPIGLGLSLILNALFFAKKMNAEGVLTLPDVYGKRYGVATEIIASLVLCCSFLCLLAGNLVGMAKILAYLFD-LDITDGVFLSGIIILVYTACGGLFSVAYTDVI 267
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: C1E525_MICCC (Solute:Sodium symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E525_MICCC)

HSP 1 Score: 179 bits (455), Expect = 6.980e-49
Identity = 102/212 (48.11%), Postives = 131/212 (61.79%), Query Frame = 1 
Query:   34 AGEDGPL---CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 660
            AG   PL   CCQ  VC IPCPA     AS    +G  +   I  FC  G+     V G  E +FVAGR L L V TL LA+Q IDSNALLG  D +YKY+F+DGAV+PIGL  SL+LNG+ LA  +N   VLTLPD Y + YG   E++ S+  C +F+C+LAGNLVG+  +L + +  +S+ G V  S ++  +YT  GGL SV YT V+
Sbjct:   41 AGAPIPLANSCCQMDVCAIPCPAAHPKPAS---GFGVGIGIMIAFFCAIGLGAFYFVGGKAENFFVAGRSLPLFVVTLTLASQSIDSNALLGNADLSYKYHFYDGAVLPIGLGLSLILNGIFLAHKVNEELVLTLPDIYGKKYGKAVEIVTSICTCCSFLCLLAGNLVGMSVILAYIFD-ISEVGAVFLSGIICLAYTACGGLFSVAYTDVV 248
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BLAST of jgi.p|Trimin1|179758 vs. uniprot
Match: A0A8J6CCI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI3_DIALT)

HSP 1 Score: 179 bits (454), Expect = 7.120e-49
Identity = 101/202 (50.00%), Postives = 128/202 (63.37%), Query Frame = 1 
Query:   55 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGVL 660
            CCQ  VC +PC A   P       +  AV  +I +FC+ G      V G  E +FVAGR L L V  L LAAQ IDSNALLG  D +YK++FWDGAV+PIGL  SL++NG+ LA+ I+  +VLTLP+ YAR YGP+ EV VS V C +FI +LAGNLVG+  VL +  GG+ Q   V  S  +   YT+ GGL SV +T V+
Sbjct:   46 CCQKDVCGLPCAA---PPPVPKVGFVIAVGVAIAIFCLIGFASYFFVGGKTENFFVAGRSLPLPVIALTLAAQSIDSNALLGNADLSYKFHFWDGAVLPIGLGLSLIINGVFLARFIHRENVLTLPEIYARYYGPVVEVCVSFVCCASFISLLAGNLVGMAAVLGYL-GGIDQTTAVFVSGTVLFVYTVSGGLFSVAFTDVV 243
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179758 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2T9_9STRA2.260e-161100.00Solute:Sodium symporter family n=1 Tax=Tribonema m... [more]
A0A836C7Y9_9STRA4.190e-8060.70Solute:Sodium symporter family (Fragment) n=1 Tax=... [more]
A0A835YRZ9_9STRA3.640e-7964.36Solute:Sodium symporter family n=1 Tax=Tribonema m... [more]
D7FZ36_ECTSI1.910e-6452.50Solute:Sodium symporter family n=1 Tax=Ectocarpus ... [more]
A0A6H5KJW0_9PHAE4.350e-5952.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3K6Q6_9STRA3.400e-5247.76Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZPW5_9STRA1.740e-5048.74Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
K8FEG1_9CHLO3.600e-5049.30Solute:Sodium symporter family n=1 Tax=Bathycoccus... [more]
C1E525_MICCC6.980e-4948.11Solute:Sodium symporter family n=2 Tax=Micromonas ... [more]
A0A8J6CCI3_DIALT7.120e-4950.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_201contigContig_201:99722..101285 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|179758|e_gw1.201.12.1
Descriptioncholine:sodium symporter activity
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0591@1|root,KOG3761@2759|Eukaryota
Evalue3.13e-65
Seed ortholog2880.D7FZ36
Hectar predicted targeting categoryother localisation
TranscriptId180080
TrackFilteredModels1
ProteinId179758
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179758gene_17131Tribonema minus UTEX_B_3156 geneContig_201 99722..101285 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17131_1exon_17131_1Tribonema minus UTEX_B_3156 exonContig_201 99722..100073 +
exon_17131_2exon_17131_2Tribonema minus UTEX_B_3156 exonContig_201 100288..100378 +
exon_17131_3exon_17131_3Tribonema minus UTEX_B_3156 exonContig_201 101045..101285 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17131CDS_17131Tribonema minus UTEX_B_3156 CDSContig_201 99722..100073 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179758Trimin1|179758|e_gw1.201.12.1Tribonema minus UTEX_B_3156 polypeptideContig_201 99722..101285 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17131 ID=mRNA_17131|Name=jgi.p|Trimin1|179758|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=684bp|location=Sequence derived from alignment at Contig_201:99722..101285+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATAACGGAAGGTTTGTGCCCGGCGCTGCCGGCTGGCGAAGACGGTCC
GTTGTGTTGTCAGCACGCAGTATGCAATATTCCCTGCCCCGCTGACTGGC
AGCCTCGTGCTTCTCTAGACACGTTCTATGGCAGCGCTGTGGTCAGCTCA
ATACTGCTCTTCTGCATGACCGGCATCGTCGTCAAAGCGAACGTGAGGGG
GATGCTGGAGCAATACTTCGTGGCGGGCAGGGGCCTCGGCCTGCTTGTCA
CCACCCTTGGGCTGGCGGCTCAATGCATAGACTCGAATGCGCTGCTGGGC
ACAGTGGACGCAGCTTACAAGTACAATTTCTGGGATGGGGCTGTGATACC
AATTGGACTCACGGCATCGCTGGTGCTGAATGGACTCTTACTGGCCAAGC
ACATCAACGCTGCGCACGTGCTGACTCTGCCGGACTTTTATGCGCGCACG
TACGGCCCGCTTTTTGAGGTCCTGGTGAGCCTGGTGCTCTGCACGACGTT
CATCTGCGTGCTCGCGGGCAATTTGGTGGGGCTCGGGAGGGTGCTGCAGT
TCTGCTACGGGGGGCTGAGCCAGGCGGGGGGGGTGGCGGCGTCGGCGCTG
CTGACGGCGAGCTACACCATGGGGGGGGGACTAAAGTCCGTCGTGTACAC
AGGTGTGCTGAGCGATGACGACAAGTTAGGTTGA
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protein sequence of jgi.p|Trimin1|179758

>Trimin1|179758|e_gw1.201.12.1 ID=Trimin1|179758|e_gw1.201.12.1|Name=jgi.p|Trimin1|179758|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=228bp
MITEGLCPALPAGEDGPLCCQHAVCNIPCPADWQPRASLDTFYGSAVVSS
ILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLG
TVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYART
YGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASAL
LTASYTMGGGLKSVVYTGVLSDDDKLG*
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mRNA from alignment at Contig_201:99722..101285+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17131 ID=mRNA_17131|Name=jgi.p|Trimin1|179758|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1564bp|location=Sequence derived from alignment at Contig_201:99722..101285+ (Tribonema minus UTEX_B_3156 )
ATGATAACGGAAGGTTTGTGCCCGGCGCTGCCGGCTGGCGAAGACGGTCC
GTTGTGTTGTCAGCACGCAGTATGCAATATTCCCTGCCCCGCTGACTGGC
AGCCTCGTGCTTCTCTAGACACGTTCTATGGCAGCGCTGTGGTCAGCTCA
ATACTGCTCTTCTGCATGACCGGCATCGTCGTCAAAGCGAACGTGAGGGG
GATGCTGGAGCAATACTTCGTGGCGGGCAGGGGCCTCGGCCTGCTTGTCA
CCACCCTTGGGCTGGCGGCTCAATGCATAGACTCGAATGCGCTGCTGGGC
ACAGTGGACGCAGCTTACAAGTACAATTTCTGGGATGGGGCTGTGATACC
AAGTGAGTGCCGCGGCGTGCGCTGGTGCGCCAGTGTAAGAAGTAGCAGAC
CGGTCATCATAGACTAGATTGTTCTCGCCTGCACAGTTTCTGGCACCAAC
ATCACACTGCGCAAGCTTGCCACGCCCACGTTGGAATTGCCTCTATAATA
CAGCATGCCGCCTCAATTCACTTTGCTAAGCATATATTGCAATTGACCTT
GGTTTGATCCATGCAGTTGGACTCACGGCATCGCTGGTGCTGAATGGACT
CTTACTGGCCAAGCACATCAACGCTGCGCACGTGCTGACTCTGCCGGACT
TTTATGCGTAAGTGCAAGAGTGCTAAGCAGAACCCCAGCTTTGGCAGCAT
CGAGCGCTTGCAATTTTTGCAGTGCTTGCACCCTTTTTGAAGACTTGACT
GCTACTAGCAGCACGGGCACGTGCTACCAAAGGAAGTACTTCAATTACAC
TTGTCTGAAGCTGAAGTATGCCAAGCGATGGCCACTGCATTTTTATATAT
TGTGAGCACAGCCGCGGCAAGGTAAATGATGGCGTTGCTAGTCTCGTCTT
CTTGTTGGCGCATACCTGGCTCAGCCAATGCCATTGTCTATAAAAAAAAG
CAGCAAACGGCAGTTTCTTGCAAGTGCCACCAGGCAAGGCAGGCAAGGCT
GTCGTTGGTGGAATCGGCTGCCCGTAGAGTAGTCAAGGCGCTGTGTAACA
CGCTGTTTCATATAACACCACAGCAATCTGTTATCCTGCTTGTCACAAAG
AAGCATTGGAGTCAGCCTCAAATGTAATTGAGCTACAGACCCTTACTCTG
CAATGGCACCCGCTGGCACTGCACATATTCCTCTCCTACAAGTGCTCTTC
CTGTCCTTTGAGGCTTGAGCTGTCTCTCACAAATGGATTCAAACAATCAG
CAGTTCAACACAGCATTGCGTGCGCAGCTGCTCCACGCTGCTCCAACCCG
CTGCCTGCACCTCACCGCCGCAGGCGCACGTACGGCCCGCTTTTTGAGGT
CCTGGTGAGCCTGGTGCTCTGCACGACGTTCATCTGCGTGCTCGCGGGCA
ATTTGGTGGGGCTCGGGAGGGTGCTGCAGTTCTGCTACGGGGGGCTGAGC
CAGGCGGGGGGGGTGGCGGCGTCGGCGCTGCTGACGGCGAGCTACACCAT
GGGGGGGGGACTAAAGTCCGTCGTGTACACAGGTGTGCTGAGCGATGACG
ACAAGTTAGGTTGA
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Coding sequence (CDS) from alignment at Contig_201:99722..101285+

>mRNA_17131 ID=mRNA_17131|Name=jgi.p|Trimin1|179758|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=684bp|location=Sequence derived from alignment at Contig_201:99722..101285+ (Tribonema minus UTEX_B_3156 )
ATGATAACGGAAGGTTTGTGCCCGGCGCTGCCGGCTGGCGAAGACGGTCC
GTTGTGTTGTCAGCACGCAGTATGCAATATTCCCTGCCCCGCTGACTGGC
AGCCTCGTGCTTCTCTAGACACGTTCTATGGCAGCGCTGTGGTCAGCTCA
ATACTGCTCTTCTGCATGACCGGCATCGTCGTCAAAGCGAACGTGAGGGG
GATGCTGGAGCAATACTTCGTGGCGGGCAGGGGCCTCGGCCTGCTTGTCA
CCACCCTTGGGCTGGCGGCTCAATGCATAGACTCGAATGCGCTGCTGGGC
ACAGTGGACGCAGCTTACAAGTACAATTTCTGGGATGGGGCTGTGATACC
AATTGGACTCACGGCATCGCTGGTGCTGAATGGACTCTTACTGGCCAAGC
ACATCAACGCTGCGCACGTGCTGACTCTGCCGGACTTTTATGCGCGCACG
TACGGCCCGCTTTTTGAGGTCCTGGTGAGCCTGGTGCTCTGCACGACGTT
CATCTGCGTGCTCGCGGGCAATTTGGTGGGGCTCGGGAGGGTGCTGCAGT
TCTGCTACGGGGGGCTGAGCCAGGCGGGGGGGGTGGCGGCGTCGGCGCTG
CTGACGGCGAGCTACACCATGGGGGGGGGACTAAAGTCCGTCGTGTACAC
AGGTGTGCTGAGCGATGACGACAAGTTAGGTTGA
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