Trimin1|179449|e_gw1.194.49.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|179449
Unique NameTrimin1|179449|e_gw1.194.49.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length206
Homology
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A835Z349_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z349_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 1.470e-137
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQVQMLILLPYAVVYDLVESGTWI 205
            KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQVQMLILLPYAVVYDLVESGTWI
Sbjct:    1 KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQVQMLILLPYAVVYDLVESGTWI 205          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A6L5CIY9_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CIY9_9INSE)

HSP 1 Score: 108 bits (269), Expect = 1.570e-24
Identity = 78/197 (39.59%), Postives = 107/197 (54.31%), Query Frame = 0
Query:    2 LRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEG--LSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLID-----------------SW-DECAGLFSATVSASLVELSFNGN 178
            +R+L+LQ N I+ +D LPALP L+FLDLY + +  L      +   P+LRVL++GKNR           L++L+ LDLH N + T  G  L AL  L+VLN+AGN+LR V    L GL  L ELNL RN +  V    ++  L++LFLS+N I                   W D    L + + S  L+ELS +GN
Sbjct:  105 VRLLSLQHNAITRLDGLPALPRLVFLDLYDNQLERLV----GIGVLPNLRVLLIGKNR------PGFQDLLRLEVLDLHGNRL-TKLGRGLEALSELKVLNVAGNQLRGVSNHELQGLVRLQELNLRRNQLQQVDALSKVSSLKKLFLSNNNIQRFKPLIVQTIGDLVNQRQWFDSMVELMNTSSSCGLLELSIDGN 290          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A7S3NLU7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.390e-17
Identity = 69/179 (38.55%), Postives = 92/179 (51.40%), Query Frame = 0
Query:    2 LRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRV-LNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNP 179
            L++LNLQ N I  +  L  +PNLIFLD Y + ++ L      L +   LRV MLGKNRL ++     N + KL  LD                       LNLA N+L  ++    L SLTELNL RN I TV   ++LP+LQRLFL+HN ++S  +    +   +S    ELS   NP
Sbjct:   43 LKLLNLQNNEIECLQYLDCVPNLIFLDFYHNKLQHL--DGTQLEKIAQLRVFMLGKNRLKSIG----NEIQKLQFLDXXXXXXXXXXXXXXXXXXXXXXXLNLAQNKLTEID-FKNLDSLTELNLRRNQIHTV--HIQLPKLQRLFLAHNCLNSLAQLRSFWHLPLS----ELSLQDNP 208          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A7S3XMA4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMA4_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 1.410e-16
Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 0
Query:   94 ALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIA 181
            AL  LRVLNLAGN +R V  L GLR LTELNL RN +  V     LPRLQR+FLS+N + S+D    LF    S SL+ELS + NPIA
Sbjct:    2 ALRDLRVLNLAGNAIRVVHNLGGLRGLTELNLRRNRVEHVFELHFLPRLQRVFLSNNQVRSFDHVQCLFK---SQSLLELSLDNNPIA 86          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: G9K8S2_MUSPF (Leucine rich repeat containing 49 (Fragment) n=1 Tax=Mustela putorius furo TaxID=9669 RepID=G9K8S2_MUSPF)

HSP 1 Score: 74.3 bits (181), Expect = 8.130e-14
Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   77 LDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEG--LSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQ 183
            LDLH N I  +    +S L  LRVLNLA N L  V+   LSGL SLTELNL  N IT V     LP LQRLFLS N I +++    L     S+SL +++F+GN IA +
Sbjct:    2 LDLHGNQITKIEN--VSHLCDLRVLNLARNLLSHVDNHNLSGLDSLTELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLAD---SSSLSDITFDGNSIAQE 105          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A0S4ITQ7_BODSA (Leucine-rich repeat protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4ITQ7_BODSA)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-12
Identity = 68/217 (31.34%), Postives = 107/217 (49.31%), Query Frame = 0
Query:    2 LRMLNLQKNCISDIDNLPALP------------------NLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALN-TLVKLDTLDLHSNAIAT-------------VSGCCLSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPR----LQRLFLSHNL-IDSWDECAGLFSA-TVSASLVELSFNGNPI 180
            +++LNLQ N   D+++L A P                  ++++LDLY++ ++ L+ + +       LRVLM+GKNRLT LS+     T   L+ LD+H N + T              S         LRVLN+AGNRL  + G+  L +L+E N  RN IT +   +  PR    L++ FLS+ L +  W+E   +    T    L E++ + NP+
Sbjct:  303 VKLLNLQNN---DLEHLTAPPLASSPPYAPAPTPLSCFGSVVYLDLYNNRLQSLSGAEQL----KKLRVLMVGKNRLTDLSLLHEQVTPTALEVLDVHGNCLTTFFLSLEESTASGGASPVATKVFPQLRVLNVAGNRLTNLCGMECLPALSEFNARRNRITDLPDSM--PRHALNLRKCFLSYQLGVAGWEEARHVVKTITACKHLEEVTLDANPL 510          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A3Q3X7P0_MOLML (Uncharacterized protein n=3 Tax=Mola mola TaxID=94237 RepID=A0A3Q3X7P0_MOLML)

HSP 1 Score: 71.2 bits (173), Expect = 6.520e-11
Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   92 LSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQ 183
            +S L  L+VLNLAGN + RVE L GL  LTE NL  N I+ V     LP LQRLFLS N I S+D+ A L       SL E++ +GNPIA +
Sbjct:  131 VSHLSQLKVLNLAGNSISRVENLQGLDCLTEHNLWHNCISVVIEVDLLPCLQRLFLSCNNIISFDQLACLGEL---CSLSEVTLDGNPIALE 219          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: UPI0015FCF0DF (leucine-rich repeat-containing protein 49 isoform X1 n=2 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015FCF0DF)

HSP 1 Score: 69.3 bits (168), Expect = 3.070e-10
Identity = 64/187 (34.22%), Postives = 84/187 (44.92%), Query Frame = 0
Query:    1 KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSREL----ELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQ 183
            +LR+LN Q N I+ I NL  L +L FLDLY + I  ++  +++            G  R     I +L+ L KLD LDLH N I+ +    LS L                                    TV RE     +LP LQRLFLS N I S+DE A L     S SL EL+ +GNP+A +
Sbjct:   42 RLRLLNFQHNLITHIHNLSHLRHLAFLDLYDNHISQMSGISQSAYA---------GIQR-----ICSLDNLTKLDILDLHGNQISQIGN--LSHLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVRERREVDQLPCLQRLFLSCNSITSFDELACLGE---SCSLSELTLDGNPVALE 209          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: F0YKZ7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKZ7_AURAN)

HSP 1 Score: 65.1 bits (157), Expect = 1.500e-9
Identity = 61/183 (33.33%), Postives = 78/183 (42.62%), Query Frame = 0
Query:    1 KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRVLNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHNLIDSWDECAGLFSATVSASLVELSFNGNPIATQ 183
            ++R+LN Q N I +I +L  LPNLIFLDLY++ I  L+   R L   P+LRVLMLGKNR+ A+S   L  L KL                                                                   LQR+FLS+N + S+D  A LF       L+ELS +GNPIA Q
Sbjct:    1 RVRLLNYQNNYIEEIRHLSHLPNLIFLDLYNNCIESLS---RDLECVPTLRVLMLGKNRIKAIS--HLEKLGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXLQRVFLSNNRVQSFDAVACLFDVRF---LMELSMDGNPIALQ 173          
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Match: A0A8J2SSU8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSU8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.640e-9
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSLRVLMLGKNRLTALSIAALNTLVKLD 75
            ++R+LN Q N I +I NL  LPNLIFLDLY++ I +L+     L   P+LRVLMLGKNR+ A+S   L+ LVKLD
Sbjct:  235 QVRLLNYQSNYIKEIQNLVHLPNLIFLDLYNNRIENLSHD---LGCVPTLRVLMLGKNRIRAIS--HLDKLVKLD 304          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179449 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A835Z349_9STRA1.470e-137100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6L5CIY9_9INSE1.570e-2439.59Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A7S3NLU7_9STRA4.390e-1738.55Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3XMA4_HETAK1.410e-1656.82Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
G9K8S2_MUSPF8.130e-1448.62Leucine rich repeat containing 49 (Fragment) n=1 T... [more]
A0A0S4ITQ7_BODSA1.030e-1231.34Leucine-rich repeat protein, putative n=1 Tax=Bodo... [more]
A0A3Q3X7P0_MOLML6.520e-1151.09Uncharacterized protein n=3 Tax=Mola mola TaxID=94... [more]
UPI0015FCF0DF3.070e-1034.22leucine-rich repeat-containing protein 49 isoform ... [more]
F0YKZ7_AURAN1.500e-933.33Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2SSU8_9STRA3.640e-954.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 95..116
e-value: 23.0
score: 10.2
coord: 117..137
e-value: 27.0
score: 9.7
coord: 71..94
e-value: 9.7
score: 13.4
coord: 139..162
e-value: 7.1
score: 14.5
coord: 21..44
e-value: 63.0
score: 6.7
coord: 47..70
e-value: 58.0
score: 7.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 88..200
e-value: 4.6E-19
score: 70.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..87
e-value: 8.0E-16
score: 59.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 48..108
e-value: 5.4E-12
score: 45.3
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 97..118
score: 8.428121
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1..22
score: 8.928666
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 119..140
score: 7.303818
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 141..162
score: 7.057395
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 1..39
e-value: 3.2E-6
score: 27.4
NoneNo IPR availablePANTHERPTHR45973:SF8LEUCINE-RICH REPEAT-CONTAINING 49coord: 1..184
NoneNo IPR availablePANTHERPTHR45973PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATEDcoord: 1..184
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_194contigContig_194:202008..203878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179449mRNA_17476Tribonema minus UTEX_B_3156 mRNAContig_194 202008..203878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|179449|e_gw1.194.49.1 ID=Trimin1|179449|e_gw1.194.49.1|Name=jgi.p|Trimin1|179449|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=206bp
KLRMLNLQKNCISDIDNLPALPNLIFLDLYSSGIRDLADSARALARTPSL
RVLMLGKNRLTALSIAALNTLVKLDTLDLHSNAIATVSGCCLSALGGLRV
LNLAGNRLRRVEGLSGLRSLTELNLGRNFITTVSRELELPRLQRLFLSHN
LIDSWDECAGLFSATVSASLVELSFNGNPIATQVQMLILLPYAVVYDLVE
SGTWI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR025875Leu-rich_rpt_4