Trimin1|179148|e_gw1.185.19.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|179148
Unique NameTrimin1|179148|e_gw1.185.19.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length377
Homology
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BLAST of jgi.p|Trimin1|179148 vs. uniprot
Match: A0A835Z5Y8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Y8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.470e-25
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:    1 MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHGCEYLTR 56
            MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHGCEYLTR
Sbjct:    1 MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHGCEYLTR 56
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BLAST of jgi.p|Trimin1|179148 vs. uniprot
Match: A0A836CKU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKU4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.040e-23
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHGCEYLT 55
            MLRTAIRATDDGFQADALPLVR LAP++RAASLPDDFGALSALTDCDLHGCEYLT
Sbjct:    1 MLRTAIRATDDGFQADALPLVRSLAPSRRAASLPDDFGALSALTDCDLHGCEYLT 55
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BLAST of jgi.p|Trimin1|179148 vs. uniprot
Match: A0A835YQD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD9_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.070e-9
Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:    1 MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHGCEYL 54
            MLRTAIRATD GFQADAL LV+ L P +R  SLPDD   LSALT  D+  CE L
Sbjct:    1 MLRTAIRATDTGFQADALSLVQSLVPNERVTSLPDDISVLSALTAVDVSSCEKL 54
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BLAST of jgi.p|Trimin1|179148 vs. uniprot
Match: A0A835ZFG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.560e-7
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0 
Query:    1 MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHGCEYLT 55
            MLRTA+RAT  GFQADAL LV     + R ASLPD+ GALSA+T   L GC+ LT
Sbjct:  161 MLRTAVRATGAGFQADALALVHSFTLSDRVASLPDEVGALSAVTVVVLSGCDRLT 215
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179148 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z5Y8_9STRA2.470e-25100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CKU4_9STRA8.040e-2394.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQD9_9STRA3.070e-966.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFG8_9STRA3.560e-761.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 364..376
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 246..365
coord: 178..268
coord: 78..195
coord: 30..126
coord: 127..247
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 35..364
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 89..147
e-value: 5.6E-7
score: 29.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 25..376
e-value: 7.8E-76
score: 256.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_185contigContig_185:118628..119758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179148mRNA_15471Tribonema minus UTEX_B_3156 mRNAContig_185 118628..119758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|179148|e_gw1.185.19.1 ID=Trimin1|179148|e_gw1.185.19.1|Name=jgi.p|Trimin1|179148|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=377bp
MLRTAIRATDDGFQADALPLVRPLAPTKRAASLPDDFGALSALTDCDLHG
CEYLTRLPDCISNLSGLTRLYARYCSRLLSLPACIGSLPALATLDLTRCY
SLSSLPDSIGGLAALTDLNLSGCTITTRLPDSIGNLVSLKSLNLSACTSL
FGLPDSIGNLALLTALNMCDCTVFYNCPSSIGNLAALAKLDLGNCDTLSS
LPESIGGLTALTWLNLSGLTVLRRLPNSIGHLVSLAKLNMMCCRTLKSLP
ESIGALAALTYLCLAKCKRLTSLPDSIGALRSLKVLDLAECEALTALPDS
IGDLSALSQLRLRSCMRLSELPVCLGELAQLTLLDLSFCSQLASLPDTLG
KLALLTKIHTDGCRERLTQSAKALQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf