Trimin1|178236|e_gw1.167.79.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178236
Unique NameTrimin1|178236|e_gw1.167.79.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length293
Homology
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A835Z8Y7_9STRA (Tic22-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y7_9STRA)

HSP 1 Score: 575 bits (1482), Expect = 3.240e-207
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query:    1 MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY 292
            MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY
Sbjct:    1 MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY 292          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: D7FZH1_ECTSI (Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH1_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 6.910e-47
Identity = 103/270 (38.15%), Postives = 157/270 (58.15%), Query Frame = 0
Query:   19 KKRLAQVAAGFAVATAGAPALS-------QGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGG-QQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA---VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVR 276
            ++ LA+ AA  A  T GA ALS         + S    +  V     M SAEASV + F +RT++EKLAN+PAF + N+ G+ YL+  E G  Q  +FFT+ +DA +ML EM+Q      +ARIL++ ++KA+ M+K  P+ TG  ND G  E ++F+    +H  +K     +     AA   VPVFY  GL + ++G  VKP+F D  +L++AW KAA ++P+MP  P ++V+N+P++++ ME    +   FGF  +    E IK+ R
Sbjct:  104 RRSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTEPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTGYQNDEGVDERMDFKLEPDMHSFQKARRLGLDVSPAAANIDVPVFYVEGLEVKRDGGLVKPLFMDPADLVEAWKKAAASNPDMPAEPTVKVFNMPDVIVAMELTD-EFNQFGFFASTEGAEFIKQAR 372          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: R7QF31_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF31_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 2.930e-27
Identity = 80/227 (35.24%), Postives = 125/227 (55.07%), Query Frame = 0
Query:   61 SAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYL-NIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIK-HPRATGMVNDMGQPETIEFRFH---EAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHT-DFGFVPAGSSVEAI-KEVRGQHG 280
            +A A    KF+++T+ EKL+ VP FA+ N  G  YL N+  +G Q G+ F S  DA +ML +M ++PG + DAR+ I+ LDKA++M+K  P+ +G+    G+  T+ FRF    + V   E ++    + +    +PVF A GLT+ K    V P+F   ++L  AW K   ++ ++P    + V NL  ++  MESD      + GF    +SVE + KE  G  G
Sbjct:   13 AAPAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPGAS-DARVYIMGLDKAYEMVKAKPQPSGIRGAAGEELTMVFRFFPDSKQVKAAEGLQRKLRRRRGVEGIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYVTKEQAGPTG 238          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A7J7IP27_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP27_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 5.440e-25
Identity = 79/237 (33.33%), Postives = 122/237 (51.48%), Query Frame = 0
Query:   69 KFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNG-DARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA--VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMES--------DPTKHTDF---GFVPAGSSVE-----AIKEVRGQHGTRARP 285
            +++++TL EKLA VP FA+ N  G  +L   E G Q G+ F    DA  ML ++ +S G    DARI ++ LD+AF+M+K  P+ +G+    G    + FRF+      E       + KQ     VP F A GLT+ K    V PVF D ++L DAW +  +   ++P+ P+++V +L E++L +E         D  +  D     F P+  SVE     ++K+ +G     ARP
Sbjct:  134 RYSRKTLDEKLAQVPVFAVTNESGQPFLAAMERGTQVGLIFFDPSDAMKMLEDLKRSSGKEAEDARIFVMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQVEHARSLARKTKQPLVRGVPCFVAKGLTLRKGKEFVIPVFLDKRDLEDAWSRLRQDMSDLPKHPEVEVGDLIEVILRLEEAAKNPKSLDEKELQDIRRVAFFPSSKSVEFMKQESMKQFKGTARMHARP 370          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: M1URJ3_CYAM1 (Similar to chloroplast inner membrane protein Tic22 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1URJ3_CYAM1)

HSP 1 Score: 111 bits (278), Expect = 9.280e-25
Identity = 83/254 (32.68%), Postives = 128/254 (50.39%), Query Frame = 0
Query:   52 QVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNG-DARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA--VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMES--------DPTKHTDF---GFVPAGSSVE-----AIKEVRGQHGTRARP 285
            QVL      SA  +   +++++TL EKLA VP FA+ N  G  +L   E G Q G+ F   +DA  ML ++ +S G    DARI I+ LD+AF+M+K  P+ +G+    G    + FRF+      E       + KQ     VP F A GLT+ K    V P+F D ++L +AW +  +    +P+ P+I+V +L E++L +E         + T+  D     F P+  SVE     + K+ +G     +RP
Sbjct:  109 QVLLGAPAVSAAKTPHARYSRKTLSEKLAQVPVFAVTNESGQPFLAAMERGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQLEYARTVAKKTKQPTVRGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNRLRQELAELPKQPEIEVGDLIEVILRLEEAAKNPKSLNETELQDLRRVAFFPSSKSVEFMKRESAKQFKGTARMHSRP 362          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A6H5L2Q1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.750e-19
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 0
Query:   17 RLKKRLAQVAAGFAVATAGAPALS-------QGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGG-QQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKH-PRATG 153
            R ++ LA+ AA  A  T GA ALS         + S    +  V     M SAEASV + F +RT++EKLAN+PAF + N+ G+ YL+  + G  Q  +FFT+ +DA +ML EM+Q      +ARIL++ ++KA+ M+K  P+ TG
Sbjct:  102 RARRSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTKPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTG 247          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A2V3IZ91_9FLOR (Protein TIC 22, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ91_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 1.320e-16
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 0
Query:  101 TGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIK-HPRATGMVNDMGQPETIEFRFH---EAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHT-DFGFVPAGSSVEAI-KEVRGQHG 280
            +G Q G+ F S  DA +ML +M ++PG + DAR+ I+ LDKA++M+K  P  +G+    G+  T+ FRF+   + V   E ++           VPVF A GLT+ K    + P+F   ++L  +W K  +++ ++P    + V NL  ++  MESD      + GF    +SVE + KE  G  G
Sbjct:    4 SGSQIGLIFFSHLDALNMLKDMQKNPGAS-DARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKHLPNSAPVAVGNLLYIIQQMESDEQPQLRNLGFFAPRASVEYVSKEQAGPTG 188          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A6H5L2U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U4_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.410e-15
Identity = 43/124 (34.68%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  156 NDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA---VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVR 276
            ND G  E ++F+    +H  +K     +     AA   +PVFYA GL + ++G  VKP+F D  +L++AW KA  ++P+MP  P ++V+N+P++++ ME    +   FGF  +    E IK+ R
Sbjct:   23 NDDGVDEMMDFKLEPDMHSFQKARRLGLDVSPAAANTDIPVFYAEGLEVKRDGGLVKPLFMDPADLVEAWKKATASNPDMPAEPTVKVFNMPDVIVAMELTD-EFNQFGFFASTEGAEFIKQAR 145          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A1X6NSW5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSW5_PORUM)

HSP 1 Score: 80.1 bits (196), Expect = 1.270e-13
Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 0
Query:   78 KLANVPAFAIVNRGGNFYL-NIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIK-HPRATGMVNDMGQPETIEFRFH-EAVHPREKMELYRVQDKQG----AAVPVFYAGGLTIVKEGVKVKPVFFDVKEL 218
            KLA VP FA+ N GG  YL N+   G Q G+ F S E+A  M  +M +SP    DAR+ I+ LDKA++M+K  P  +G+    G+   + FRF  +         L R     G    A VPVF A GLT+ K G  V P+F   +++
Sbjct:  123 KLAQVPVFAVTNAGGQPYLANVDGAGTQVGLIFFSHEEALSMQADMQKSP-TTADARVYIMGLDKAYEMVKAKPTPSGIRGPAGEELRMVFRFSPDRKQVGHAARLLRAVPIGGGGETAGVPVFAAPGLTLRKAGEPVVPLFLAKEDM 269          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835Z8Y7_9STRA3.240e-207100.00Tic22-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
D7FZH1_ECTSI6.910e-4738.15Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
R7QF31_CHOCR2.930e-2735.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7J7IP27_9RHOD5.440e-2533.33Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1URJ3_CYAM19.280e-2532.68Similar to chloroplast inner membrane protein Tic2... [more]
A0A6H5L2Q1_9PHAE8.750e-1940.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3IZ91_9FLOR1.320e-1633.33Protein TIC 22, chloroplastic n=1 Tax=Gracilariops... [more]
A0A6H5L2U4_9PHAE1.410e-1534.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X6NSW5_PORUM1.270e-1338.51Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1350.100coord: 170..263
e-value: 8.4E-28
score: 99.5
NoneNo IPR availableGENE3D3.40.1350.100coord: 73..273
e-value: 8.4E-28
score: 99.5
NoneNo IPR availablePANTHERPTHR33926:SF4PROTEIN TIC 22, CHLOROPLASTICcoord: 53..276
IPR007378Tic22-likePFAMPF04278Tic22coord: 69..269
e-value: 7.6E-17
score: 61.4
IPR007378Tic22-likePANTHERPTHR33926PROTEIN TIC 22, CHLOROPLASTICcoord: 53..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_167contigContig_167:175446..177813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178236mRNA_16950Tribonema minus UTEX_B_3156 mRNAContig_167 175446..177813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178236|e_gw1.167.79.1 ID=Trimin1|178236|e_gw1.167.79.1|Name=jgi.p|Trimin1|178236|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=293bp
MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTS
GQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKE
TGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPR
ATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLT
IVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLM
ESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like