Trimin1|174657|e_gw1.116.50.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|174657
Unique Name	Trimin1\|174657\|e_gw1.116.50.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	186

Homology

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A835ZE75_9STRA (Protein tyrosine phosphatase type IVA protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE75_9STRA)

HSP 1 Score: 338 bits (868), Expect = 3.530e-117
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0

Query:    1 MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185
            MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM
Sbjct:    1 MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A835YN25_9STRA (Protein tyrosine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN25_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.690e-76
Identity = 129/187 (68.98%), Postives = 142/187 (75.94%), Query Frame = 0

Query:    1 MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVT----------GXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHR 177
            M L   +SLAT+PSL+EW N+KGRKLSFLIMDAPKAHNL +YLKECK+HNVV MVRVCE TYPA+EV RAGI M  MEY DG APP EII  WLDVVD T                XXXXXX    PT+AVHCVAGLGRAPVLVAIALIE+GM+   AVEYIR RRRGAINRKQL+YLE+Y   RH+
Sbjct:    1 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHK 187

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: D7FKQ1_ECTSI (Protein tyrosine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ1_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.010e-60
Identity = 105/166 (63.25%), Postives = 121/166 (72.89%), Query Frame = 0

Query:    6 ATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERY 171
            A +++  PSL+EW     +KL F+IMDAPKA+NL LY++E K+ NVV +VRVCE TYPA EV  AGI +  MEY DG APP EIIN+WLDVV  T                PTIAVHCVAGLGRAPVLVAIALIE G DPI AVEYIR+RRRGAINRKQL+YL+ Y
Sbjct:   32 AATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGIKLLEMEYDDGGAPPVEIINKWLDVVQTT-FHNAPDSSGPNGSEGPTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSY 191

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A6H5KJ35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ35_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 3.320e-59
Identity = 103/166 (62.05%), Postives = 121/166 (72.89%), Query Frame = 0

Query:    6 ATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERY 171
            A +++  PSL+EW     +KL F+IMDAPKA+NL LY++E K+ NVV +VRVCE TYPA EV  AG+ +  MEY DG APP EIIN+WL+VV  T                PTIAVHCVAGLGRAPVLVAIALIE G DPI AVEYIR+RRRGAINRKQL+YL+ Y
Sbjct:   43 AATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPVEIINKWLNVVKTT-FHNAPDSSGPNGSEGPTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSY 202

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A7S3GSY3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSY3_9STRA)

HSP 1 Score: 177 bits (450), Expect = 9.080e-54
Identity = 98/180 (54.44%), Postives = 116/180 (64.44%), Query Frame = 0

Query:    6 ATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185
            A SL  +PSLIEW       L  LIMDAPK  NL LYLK+CK+ NV S+VR+ E +Y  EEV ++GI +H M YPDG +PP ++I +WL V+  T                P IA+HCVAGLGRAPVLVAIALIE GMD I AV +IRERRRGAIN  QL YLE Y P R +    C +M
Sbjct:    4 ANSLVNKPSLIEWG-----PLRLLIMDAPKDSNLHLYLKQCKKSNVTSIVRISEPSYSREEVEKSGIALHEMYYPDGHSPPPDVIARWLTVLADT-------FDNKGPDETPCIAIHCVAGLGRAPVLVAIALIEYGMDAISAVTFIRERRRGAINTVQLNYLESYKPMRKKGDKKCTIM 171

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A7R9Y7Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7Z4_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.660e-53
Identity = 101/185 (54.59%), Postives = 123/185 (66.49%), Query Frame = 0

Query:    2 VLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIE-SGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185
            V ++  SLA RPSL+E  + +     FLI+DAPK H+L  YL ECK++NVV +VRVC+ TY AE V  AGI MH MEY DG  PPQE+I++WLDVV+ T                P IAVHCVAGLGRAPVLVAIALIE + ++P  AV  IR++RRGAIN KQL YLE Y  TR     +C +M
Sbjct:    8 VELNTVSLAGRPSLVEVDDMR-----FLILDAPKEHDLPQYLLECKKNNVVHLVRVCQPTYNAEHVESAGIHMHEMEYADGSHPPQEVIDKWLDVVEQT----FSAKAVAKADEKPCIAVHCVAGLGRAPVLVAIALIEFAALEPTEAVTLIRKQRRGAINSKQLQYLESYVATRAGGACSCVIM 183

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A8K1FCX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCX2_PYTOL)

HSP 1 Score: 174 bits (441), Expect = 1.980e-52
Identity = 93/174 (53.45%), Postives = 120/174 (68.97%), Query Frame = 0

Query:   12 RPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185
            +P+L++W      +LSF+IMDAP   NL LYLKE K++NV  +VR CE TY  E V  AGI +H ME+PDG+ P  EI+++WLD+V  T                 +IAVHCVAGLGRAPVLVAIALIE G+DPI+AVE+IR+ RRGAIN +QL YLE+Y P+R  +   C++M
Sbjct:    7 KPTLVQW-----EELSFVIMDAPNNSNLHLYLKELKKYNVTELVRACEVTYGREGVEAAGIRVHEMEFPDGEPPDAEILDKWLDLVSET-----FKDNKAGSRSNKSIAVHCVAGLGRAPVLVAIALIEHGLDPINAVEHIRKHRRGAINLRQLKYLEKYEPSRGHK-SKCSIM 169

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: H3GU63_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GU63_PHYRM)

HSP 1 Score: 174 bits (440), Expect = 2.800e-52
Identity = 91/174 (52.30%), Postives = 120/174 (68.97%), Query Frame = 0

Query:   12 RPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185
            +P++++W +     LSF+IMDAP   NL +YLKE K+HNV  +VR CE TY +E V  AGI +H +E+PDG++P  EI++QWLD+V+                   +IAVHCVAGLGRAPVLVAIALIE G+DPI+AVE+IR+ RRGAIN +QL YLE+Y P R  +   C +M
Sbjct:    7 KPTMVKWEH-----LSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLVE-----ECFKDNSIDAKNNKSIAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQPRRGNK-AKCVIM 169

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A7S2XV81_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV81_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.380e-52
Identity = 93/159 (58.49%), Postives = 104/159 (65.41%), Query Frame = 0

Query:   16 IEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPT 174
            +EW       L FLIMD P+ HNL LY+KE K +NV  +VRVCE  Y A EV +AGI MH ME+ DGD+PP  II  WL +VD T                P IAVHCVAGLGRAPVLVAIA IE G DP+H V+YIR RRRGAIN KQL YLE YA T
Sbjct:    1 VEWG-----PLRFLIMDTPREHNLHLYIKEMKNNNVTDVVRVCEKAYSAAEVEKAGIRMHEMEFDDGDSPPGGIITDWLHLVDET-----FKGVKEGNPSSPAIAVHCVAGLGRAPVLVAIACIERGADPLHIVKYIRNRRRGAINAKQLMYLENYAAT 149

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BLAST of jgi.p|Trimin1|174657 vs. uniprot
Match: A0A485KIA3_9STRA (Aste57867_5759 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIA3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.510e-52
Identity = 94/174 (54.02%), Postives = 118/174 (67.82%), Query Frame = 0

Query:   12 RPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM 185
            +PS +++      +LSFLI+DAP   NL LY+KE K++ V  +VR CE TY    V  AG  +H ME+PDGD P  EIINQWLD+V+ T                 TIAVHCVAGLGRAPVLVAIALIE+G+D I+AVE+IR+ RRGAIN +QL YLE+Y PTR + +G C +M
Sbjct:    7 KPSHVQY-----EQLSFLILDAPNDTNLPLYVKEFKKYQVTDIVRACESTYSCTSVESAGFRLHEMEFPDGDPPSAEIINQWLDLVETT-FKDNSKVNAGNNPNDKTIAVHCVAGLGRAPVLVAIALIENGLDVINAVEHIRQSRRGAINLRQLKYLEKYQPTR-KDKGKCTIM 173

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|174657 vs. uniprot

BLAST of jgi.p|Trimin1|174657 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZE75_9STRA	3.530e-117	100.00	Protein tyrosine phosphatase type IVA protein 1 n=...	[more]
A0A835YN25_9STRA	2.690e-76	68.98	Protein tyrosine phosphatase n=1 Tax=Tribonema min...	[more]
D7FKQ1_ECTSI	1.010e-60	63.25	Protein tyrosine phosphatase n=1 Tax=Ectocarpus si...	[more]
A0A6H5KJ35_9PHAE	3.320e-59	62.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3GSY3_9STRA	9.080e-54	54.44	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7R9Y7Z4_9STRA	2.660e-53	54.59	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A8K1FCX2_PYTOL	1.980e-52	53.45	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
H3GU63_PHYRM	2.800e-52	52.30	Uncharacterized protein n=24 Tax=Peronosporaceae T...	[more]
A0A7S2XV81_9STRA	4.380e-52	58.49	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A485KIA3_9STRA	4.510e-52	54.02	Aste57867_5759 protein n=1 Tax=Aphanomyces stellat...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000242	Tyrosine-specific protein phosphatase, PTPase domain	PRINTS	PR00700	PRTYPHPHTASE	coord: 143..158 score: 25.33 coord: 69..86 score: 23.63 coord: 118..136 score: 44.46
IPR000242	Tyrosine-specific protein phosphatase, PTPase domain	PFAM	PF00102	Y_phosphatase	coord: 51..163 e-value: 1.4E-4 score: 21.5
IPR003595	Protein-tyrosine phosphatase, catalytic	SMART	SM00404	ptp_7	coord: 70..174 e-value: 4.6E-5 score: 32.8
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10	Protein tyrosine phosphatase superfamily	coord: 10..172 e-value: 8.9E-42 score: 144.8
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 28..170
None	No IPR available	PIRSR	PIRSR037322-1	PIRSR037322-1	coord: 120..171 e-value: 7.3E-4 score: 16.8
None	No IPR available	PIRSR	PIRSR620405-1	PIRSR620405-1	coord: 119..168 e-value: 0.0013 score: 15.9
None	No IPR available	PIRSR	PIRSR000927-1	PIRSR000927-1	coord: 118..156 e-value: 0.0012 score: 14.9
None	No IPR available	PANTHER	PTHR23339	TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE	coord: 23..182
None	No IPR available	PANTHER	PTHR23339:SF98	PRL-1 PHOSPHATASE, ISOFORM A	coord: 23..182
None	No IPR available	CDD	cd14500	PTP-IVa	coord: 13..175 e-value: 8.74536E-80 score: 232.496
IPR000387	Tyrosine-specific protein phosphatases domain	PROSITE	PS50056	TYR_PHOSPHATASE_2	coord: 115..167 score: 15.74304

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_116	contig	Contig_116:327578..328763 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|174657	mRNA_11298	Tribonema minus UTEX_B_3156	mRNA	Contig_116 327578..328763 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|174657|e_gw1.116.50.1 ID=Trimin1|174657|e_gw1.116.50.1|Name=jgi.p|Trimin1|174657|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=186bp
MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHN
VVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVT
GGGGSSGGGAEGGGGGPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVE
YIRERRRGAINRKQLTYLERYAPTRHRRRGTCAVM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000242	PTP_cat
IPR003595	Tyr_Pase_cat
IPR029021	Prot-tyrosine_phosphatase-like
IPR000387	Tyr_Pase_dom