Trimin1|173761|e_gw1.106.35.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|173761
Unique Name	Trimin1\|173761\|e_gw1.106.35.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	179

Homology

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BLAST of jgi.p|Trimin1|173761 vs. uniprot
Match: A0A835ZHF7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHF7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.860e-26
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query:    1 AQGSTQFCIAHGGGRRCTHPGCTKGARDRFXXXXXXXXXXXXXXXXXXASLFFLCRATAAVGGSSLXXXXXXXXXXXXXXXXKSAQSSTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHNQQHPDG 152
            AQGSTQFCIAHGGGRRCTHPGCTKGARDRFXXXXXXXXXXXXXXXXXXASLFFLCRATAAVGGSSLXXXXXXXXXXXXXXXXKSAQSSTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHNQQHPDG
Sbjct:    1 AQGSTQFCIAHGGGRRCTHPGCTKGARDRFXXXXXXXXXXXXXXXXXXASLFFLCRATAAVGGSSLXXXXXXXXXXXXXXXXKSAQSSTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHNQQHPDG 152

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BLAST of jgi.p|Trimin1|173761 vs. uniprot
Match: A0A7S2KTT1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTT1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.240e-8
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query:    1 AQGSTQFCIAHGGGRRCTHPGCTKGARDRF 30
            AQG T+FCIAHGGGRRCT PGC KGARD+F
Sbjct:    1 AQGPTRFCIAHGGGRRCTFPGCDKGARDKF 30

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BLAST of jgi.p|Trimin1|173761 vs. uniprot
Match: A0A6H5L6T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T1_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 5.730e-8
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0

Query:    1 AQGSTQFCIAHGGGRRCTHPGCTKGARDRF 30
            +QG+T+ CIAHGGGRRCTHPGC KGARDRF
Sbjct: 1151 SQGNTRLCIAHGGGRRCTHPGCNKGARDRF 1180

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|173761 vs. uniprot

BLAST of jgi.p|Trimin1|173761 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835ZHF7_9STRA	1.860e-26	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A7S2KTT1_9STRA	4.240e-8	83.33	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A6H5L6T1_9PHAE	5.730e-8	83.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..178
None	No IPR available	PANTHER	PTHR31827:SF39	SUBFAMILY NOT NAMED	coord: 59..148
None	No IPR available	PANTHER	PTHR31827:SF39	SUBFAMILY NOT NAMED	coord: 1..112
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 59..148
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 1..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_106	contig	Contig_106:503699..507911 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|173761	mRNA_9536	Tribonema minus UTEX_B_3156	mRNA	Contig_106 503699..507911 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|173761|e_gw1.106.35.1 ID=Trimin1|173761|e_gw1.106.35.1|Name=jgi.p|Trimin1|173761|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=179bp
AQGSTQFCIAHGGGRRCTHPGCTKGARDRFFCAAHGGGKRCSMSSCTKAS
LFFLCRATAAVGGSSLCTAHGGGKRCTAPGCSKSAQSSTPFCVKHGGGRL
CERAGCEKVARGRTRFCAAHGGGIRCRMERCNRAAVGKLQLCRVHNQQHP
DGGGGGGSAASGGGGGGSAGAGGGGESA*