Trimin1|168669|e_gw1.59.12.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168669
Unique NameTrimin1|168669|e_gw1.59.12.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length213
Homology
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A835YQG3_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG3_9STRA)

HSP 1 Score: 436 bits (1121), Expect = 7.350e-155
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
            LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM
Sbjct:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 6.280e-81
Identity = 133/220 (60.45%), Postives = 164/220 (74.55%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPG--------REQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
            +NS+LQQLYH + FS  L+G  P RR G        +EQDE+L +LQVLFASL + QR+++DT+P C+ F+DYDG+P+  AEQKD  EFC+ LL KLE SS  A  L+   FGGTL YQ++ R+  C HTS R EPF++LTAEVQ K++L  +L L  +GE L GDN YLCE+CG+RV AQRRCAIK LP TLIVHLKRFEF+L TM RHKLNHRC+FPM
Sbjct: 2687 MNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESNHPLQEQDEVLLQLQVLFASLRISQRKFYDTKPFCAVFMDYDGQPLRHAEQKDVNEFCTHLLHKLEGSSKQAGSLIDKVFGGTLAYQVISRD--CEHTSERTEPFIVLTAEVQDKESLEGSLQLLVAGEMLTGDNCYLCEKCGQRVTAQRRCAIKQLPSTLIVHLKRFEFDLSTMRRHKLNHRCSFPM 2904          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 7.440e-80
Identity = 131/220 (59.55%), Postives = 164/220 (74.55%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPG--------REQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
            +NS+LQQLYH + FS  L+G  P RR G        +E+DE+L +LQVLFA+L + QR+++DT+P C+ F+DYDG+P+  AEQKD  EFC+ LL KLE SS  A  L+   FGGTL YQ++ R+  C HTS R EPF++LTAEVQ K++L  +L L  +GE L GDN YLCE+CG+RV AQRRCAIK LP TLIVHLKRFEF+L TM RHKLNHRC+FPM
Sbjct: 1704 MNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESSDPLQEEDEVLLQLQVLFATLRISQRKFYDTKPFCAVFMDYDGQPLRHAEQKDVNEFCTHLLHKLEGSSKQAGSLIAKVFGGTLAYQVISRD--CEHTSERTEPFIVLTAEVQDKESLEGSLQLLVAGEMLTGDNCYLCEKCGQRVTAQRRCAIKQLPSTLIVHLKRFEFDLGTMRRHKLNHRCSFPM 1921          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A7S3MAA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA4_9STRA)

HSP 1 Score: 189 bits (479), Expect = 8.210e-56
Identity = 104/226 (46.02%), Postives = 137/226 (60.62%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQD-------------ELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIV--PREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFP 211
            +NS +QQL+H  AF   L+    A +  ++               ELLF+LQV+F  ++  Q+RY+DT P C +FLDYD  P+SL EQKD  EF  ML DK+E + +AA     A    T+Q +IV   R     + S R+E F MLTAEV+ K TL  +L+LFT+ E   GDNK    + GR+V A R CAI+ LPPTLI+HLKRFEF+LETM R K+N   +FP
Sbjct:   31 MNSFIQQLFHIPAFKTGLLRINAAAKTAKDATSNNSLEEKPDPNVELLFQLQVMFGFMNFSQKRYYDTLPFCRTFLDYDAEPISLTEQKDINEFAGMLFDKIEHNKEAA-----ALLASTIQGKIVWRTRSLETPYKSEREETFYMLTAEVKDKATLEDSLELFTADELFSGDNKIEDAEAGRKVDALRGCAIRSLPPTLIIHLKRFEFDLETMNRKKVNDHISFP 251          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: L8GPA8_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPA8_ACACA)

HSP 1 Score: 187 bits (475), Expect = 4.200e-51
Identity = 89/214 (41.59%), Postives = 140/214 (65.42%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARE--LVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
            +NS++QQ +    F   ++    +    ++++ LL++LQ +F  L   +++Y+DTRP CSS+ D++G+PM++ +Q+DA EF +MLLD+LE      +E  L+   FGG L  QI+ ++  C H S R+E F  L+ +++ K ++  +L L+  G+ L+GDNK+ C +C  +V A +RC +K+LP  LIVHLKRFEF+LETM R KLN  C FPM
Sbjct: 1407 MNSLMQQFFMIPGFRWGMLEVQDSEE--KKEESLLWQLQTIFGYLQESEKKYYDTRPFCSSYKDWEGQPMNVGQQQDADEFMNMLLDRLESILKKTQEEKLLSQFFGGALSNQIISKD--CTHVSEREENFFTLSLDIKNKKSILESLALYVEGDMLEGDNKFHCSECNAKVDALKRCCVKNLPDNLIVHLKRFEFDLETMKRIKLNDSCQFPM 1616          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A482SHC7_9ARCH (USP domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHC7_9ARCH)

HSP 1 Score: 183 bits (465), Expect = 9.150e-50
Identity = 97/211 (45.97%), Postives = 134/211 (63.51%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFP 211
            +N+ +QQLYH + F+  L+  +       E   LL ++Q++FA L   Q+R +DT P C + +DYDG+P+SL+EQKD  EF  ML DKLE++S AA EL+  T  GT  +Q    E    + S R+E F M+T EV+ K TL  AL+L  + E   G+NK    +  ++V A RRCAI+DLPP LI+HLKRFEF+LETM R K+N   +FP
Sbjct: 1823 MNAFIQQLYHAQTFTDQLLSVSTYAEEA-EYSHLLLQMQMMFAYLKYSQKRVYDTLPFCKALIDYDGQPISLSEQKDINEFAGMLFDKLEKNS-AAAELLAQTIQGTYIWQTKSLET--TYYSEREEKFYMITVEVKNKKTLLEALELTVAEELFTGENKIEDSENNKKVDAVRRCAIRDLPPVLIIHLKRFEFDLETMNRKKVNDYMSFP 2029          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A6B2KX30_9EUKA (USP domain-containing protein n=2 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KX30_9EUKA)

HSP 1 Score: 174 bits (442), Expect = 9.190e-47
Identity = 88/214 (41.12%), Postives = 134/214 (62.62%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELV--KATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
            +NS+LQQL+ T  F   ++ A  A +   + D +L +LQ LFA L  G  +Y +T   C  +   +G+P++ ++Q DA+EF + LLDKLE        L+  +  FGG L  Q++  + GC H   R+EPF  ++ +++ K+ L +AL+LF  GE L G+NKY+CE CG  V+  +RC IKDLP  L++HLKRFEF+ +T+ R K++  C+FPM
Sbjct:    1 MNSLLQQLFLTTDFRKVVLQAPNATQD--KSDSVLHQLQCLFAGLQEGITKYQETTSFCRGYK-VNGQPVNTSQQMDAWEFFNTLLDKLENELRGTNSLISMRKIFGGNLTNQLIGVQ-GCDHKREREEPFYTISVDIKQKENLESALELFVQGEMLTGENKYMCESCGEPVSTLKRCCIKDLPHMLVIHLKRFEFDYDTLDRKKVSSPCSFPM 210          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: X6N2M1_RETFI (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N2M1_RETFI)

HSP 1 Score: 173 bits (439), Expect = 1.890e-46
Identity = 91/234 (38.89%), Postives = 135/234 (57.69%), Query Frame = 0
Query:    1 LNSVLQQLY--------------HTRAFSGPLMG-----AAPARRPG-REQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAAREL--VKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
            +NS+LQQL+              HT A +   +G     +   R+ G   +D +L+++Q+LF  L + Q++++DT PLC++   YDG P+ L EQ+D  EFC+ L D+LE   +    +  ++  FGG L  QI+ ++  C H S + E FL ++  V+ K  L  +LDL+  G+ LDGDNKY C QC  ++ A RR   K LP  L++HL RFEF+  +MTR KLN R  FPM
Sbjct:  477 MNSLLQQLFINEDFRRDILEARLHTSAMAEENLGNEEKESLELRKHGILPKDSVLYQMQLLFGYLMISQKKFYDTMPLCTTLKGYDGNPLPLGEQQDVNEFCNRLFDELEHDLNKTDRMDAIRENFGGYLVSQIISKDDTCDHRSEQVERFLTVSLTVKNKANLRESLDLYVQGDLLDGDNKYFCSQCNTKILALRRVCFKTLPKCLLLHLSRFEFDFNSMTRLKLNSRFEFPM 710          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A0D2WMI0_CAPO3 (Ubiquitinyl hydrolase 1 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WMI0_CAPO3)

HSP 1 Score: 173 bits (439), Expect = 2.890e-46
Identity = 91/213 (42.72%), Postives = 131/213 (61.50%), Query Frame = 0
Query:    1 LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLE-RSSDAARELV-KATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFP 211
            +NS++QQ +   +F   ++ A  A       D +L++LQ +F++L   ++R  DTRP   +F DYDG+PM++A Q D  EF + L D+LE R   +  E + K TFGG L  QI+ ++  C H S+R E    L  EV+ K ++  +L L+  GE LDGDNKY C  C R V A++R  +  LP TLIVHLKRFEF++ET+ R+K+N  C FP
Sbjct: 1833 MNSIMQQFFMIPSFRRNVL-AIDASAETDPADSMLYQLQCIFSNLQESEKRTFDTRPFTLTFKDYDGQPMNVAMQMDVDEFFTTLFDRLETRLKGSPHETIFKQTFGGQLIQQIISQD--CEHVSSRVEDCFALQCEVKNKKSILESLALYVEGEMLDGDNKYFCATCSRHVTAKKRACVFSLPQTLIVHLKRFEFDMETLRRYKINDYCEFP 2042          
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Match: A0A7S1CQN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQN3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 8.150e-46
Identity = 92/213 (43.19%), Postives = 128/213 (60.09%), Query Frame = 0
Query:    2 NSVLQQLYHTRAFSGPLMGAA-PARRPGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARE--LVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFP 211
            NSVLQQL+ T  F   ++ A  PA+ P   ++ +LF+LQ LF  L   +R+  D RP  ++F D DG P ++  Q+DA EF S+LLD++E +     +   +  TF G +  +I   +  C H S   EPF +L+  +    +L  AL   T+GE L GDN Y C  CG +V A +R  I++LPPTLIVHLKRFEF+ ETM + KLN RC+FP
Sbjct:  157 NSVLQQLFMTPRFRRAVLDAVDPAKDP---RESVLFQLQSLFGWLQESERKCKDPRPFFAAFKDLDGNPTNVRVQQDADEFLSLLLDRIETAVKGLPQEAAITRTFAGKVVNKITGEK--CGHVSDNQEPFQVLSVAINGHASLEEALSAHTAGEPLRGDNAYACGTCGHKVDAIKRLCIRELPPTLIVHLKRFEFDYETMLKRKLNSRCSFP 364          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168669 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQG3_9STRA7.350e-155100.00USP domain-containing protein n=1 Tax=Tribonema mi... [more]
D8LU88_ECTSI6.280e-8160.45Ubiquitin domain-containing protein (Partial) (Fra... [more]
A0A6H5KTV6_9PHAE7.440e-8059.55USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3MAA4_9STRA8.210e-5646.02Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
L8GPA8_ACACA4.200e-5141.59Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba caste... [more]
A0A482SHC7_9ARCH9.150e-5045.97USP domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A6B2KX30_9EUKA9.190e-4741.12USP domain-containing protein n=2 Tax=Arcella inte... [more]
X6N2M1_RETFI1.890e-4638.89Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A0D2WMI0_CAPO32.890e-4642.72Ubiquitinyl hydrolase 1 n=1 Tax=Capsaspora owczarz... [more]
A0A7S1CQN3_9STRA8.150e-4643.19Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 1..211
e-value: 2.0E-16
score: 60.3
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 1..212
e-value: 4.7E-46
score: 159.2
NoneNo IPR availablePANTHERPTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 1..211
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..212
score: 26.813553
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_59contigContig_59:740429..744039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168669mRNA_11158Tribonema minus UTEX_B_3156 mRNAContig_59 740429..744039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168669|e_gw1.59.12.1 ID=Trimin1|168669|e_gw1.59.12.1|Name=jgi.p|Trimin1|168669|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
LNSVLQQLYHTRAFSGPLMGAAPARRPGREQDELLFKLQVLFASLHVGQR
RYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELV
KATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFT
SGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMT
RHKLNHRCAFPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf