Trimin1|159492|e_gw1.9.182.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|159492
Unique NameTrimin1|159492|e_gw1.9.182.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length74
Homology
[Close]
BLAST of jgi.p|Trimin1|159492 vs. uniprot
Match: A0A835YHG9_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.360e-26
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 LLGRGASVTATDHAANTALHWASFAGNVDVIRLLARCGAPLDXXXXXXXXXXXXXXXXXXXXXVQVGAKRWCC 73
            LLGRGASVTATDHAANTALHWASFAGNVDVIRLLARCGAPLDXXXXXXXXXXXXXXXXXXXXXVQVGAKRWCC
Sbjct:    1 LLGRGASVTATDHAANTALHWASFAGNVDVIRLLARCGAPLDXXXXXXXXXXXXXXXXXXXXXVQVGAKRWCC 73
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159492 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YHG9_9STRA3.360e-26100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 16..65
e-value: 1.2E-9
score: 38.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 14..46
score: 11.27379
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..70
e-value: 1.8E-18
score: 68.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..65
NoneNo IPR availablePANTHERPTHR24126ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATEDcoord: 1..65
NoneNo IPR availablePANTHERPTHR24126:SF56PHYTOCHROME-INTERACTING ANKYRIN-REPEAT PROTEIN 1-RELATEDcoord: 1..65
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 14..45
score: 9.914011

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:351401..351622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159492mRNA_3536Tribonema minus UTEX_B_3156 mRNAContig_9 351401..351622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|159492|e_gw1.9.182.1 ID=Trimin1|159492|e_gw1.9.182.1|Name=jgi.p|Trimin1|159492|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=74bp
LLGRGASVTATDHAANTALHWASFAGNVDVIRLLARCGAPLDAANQDGDT
ALHFASKWARPDVVQVGAKRWCC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf