Trimin1|146722|gw1.38.112.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|146722
Unique NameTrimin1|146722|gw1.38.112.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length248
Homology
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BLAST of jgi.p|Trimin1|146722 vs. uniprot
Match: A0A836CCS5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.230e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 
Query:    1 KAPSYNVPGVGAQWCSDHKTGDMQDVAHKMCQGCGLKIPIFGIEDGSPTH 50
            KAPSYNVPGVGAQWCSDHKTGDMQDVAHKMCQGCGLKIPIFGIEDGSPTH
Sbjct:    1 KAPSYNVPGVGAQWCSDHKTGDMQDVAHKMCQGCGLKIPIFGIEDGSPTH 50
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BLAST of jgi.p|Trimin1|146722 vs. uniprot
Match: A0A835ZBE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.180e-18
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0 
Query:    1 KAPSYNVPGVGAQWCSDHKTGDMQDVAHKMCQGCGLKIPIFGIEDGSPTH 50
            KAP YN+PG  AQWC +HKTGDMQDVAHK C  CGLKIP FG EDG PTH
Sbjct:  358 KAPIYNIPGAAAQWCREHKTGDMQDVAHKRCMRCGLKIPKFGTEDGRPTH 407
[Close]
BLAST of jgi.p|Trimin1|146722 vs. uniprot
Match: A0A835ZGH9_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-8
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:   15 CSDHKTGDMQDVAHKMCQGCGLKIPIFGIEDGSPTH 50
            C +HKTGDMQDV+HK C  C LKIP FG EDG PTH
Sbjct:    1 CREHKTGDMQDVSHKRCMQCRLKIPKFGTEDGRPTH 36
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146722 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CCS5_9STRA2.230e-28100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZBE1_9STRA3.180e-1876.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGH9_9STRA1.420e-872.22Uncharacterized protein (Fragment) n=2 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 141..171
e-value: 0.28
score: 11.9
coord: 175..206
e-value: 0.014
score: 16.0
coord: 103..135
e-value: 4.6
score: 8.0
coord: 3..26
e-value: 0.036
score: 14.7
coord: 67..99
e-value: 0.023
score: 15.3
coord: 31..63
e-value: 0.016
score: 15.8
coord: 211..243
e-value: 0.0019
score: 18.8
NoneNo IPR availableGENE3D6.10.140.110coord: 10..75
e-value: 1.0E-7
score: 34.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:713692..714435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146722mRNA_9326Tribonema minus UTEX_B_3156 mRNAContig_38 713692..714435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|146722|gw1.38.112.1 ID=Trimin1|146722|gw1.38.112.1|Name=jgi.p|Trimin1|146722|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp
KAPSYNVPGVGAQWCSDHKTGDMQDVAHKMCQGCGLKIPIFGIEDGSPTH
CGDCKTEDMQDVYNNKCVQCSLKQPNFGTEDGSPTHCGDCKTADMRDVRS
RMCKGCSLKRPSFETEEGHPTHCGDCKTADMRDVRSRKCRGCEVKTPTFG
TEDGSPTHCGDCKTADMRYVRSRKCVKCGLKQPSFGKEDGSPTHCRDCKM
ADMRDVSNKKCEKCERKIPIFGTEDSRPTHCGDCKLADMLDVRRKCPH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys