Trimin1|128954|gw1.222.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|128954
Unique NameTrimin1|128954|gw1.222.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length56
Homology
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A835Z544_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z544_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.360e-33
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query:    1 TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER
Sbjct:    1 TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A835Z6K2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.250e-22
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    4 KRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            KR+ERWS +EH+ FL+AM +HGRDWK IK  LPTR+LTQVRTHAYWYL+K+ER
Sbjct:    1 KRSERWSDEEHQAFLQAMKEHGRDWKLIKRSLPTRSLTQVRTHAYWYLSKLER 53          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A2D4BZS8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZS8_PYTIN)

HSP 1 Score: 67.8 bits (164), Expect = 5.820e-12
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    3 SKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            SKR ERW+ DEH +F++ + ++GR WKKI+A + T+T  QVRTHAY Y AK+ R
Sbjct:  202 SKRRERWTEDEHALFMEGLNRYGRKWKKIQAFVKTKTAVQVRTHAYGYFAKLLR 255          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A2D4CHR8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHR8_PYTIN)

HSP 1 Score: 67.8 bits (164), Expect = 7.220e-12
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    3 SKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            SKR ERW+ DEH +F++ + ++GR WKKI+A + T+T  QVRTHAY Y AK+ R
Sbjct:  248 SKRRERWTEDEHALFMEGLNRYGRKWKKIQAFVKTKTAVQVRTHAYGYFAKLLR 301          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A1V9Z3Y4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Y4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.520e-11
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    8 RWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            RW++DE   F++ +  HG+DWKKI A +PTRTL Q+RTHA  Y  K+ER
Sbjct:   88 RWTTDEQEAFVEGLNTHGKDWKKIAAMIPTRTLMQIRTHAQKYFKKMER 136          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A0C6WCU0_9POAL (ScMYB57 protein n=1 Tax=Saccharum hybrid cultivar Co 86032 TaxID=672234 RepID=A0A0C6WCU0_9POAL)

HSP 1 Score: 58.9 bits (141), Expect = 4.690e-10
Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKV 54
            T SK+ E+W+ DEH++FL+A+ QHGR W++I+  +  +T  Q+R+HA  + +KV
Sbjct:   30 TISKQREKWTEDEHKLFLEALQQHGRAWRRIQEHIGCKTAVQIRSHAQKFFSKV 83          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: F0W9K9_9STRA (Uncharacterized protein AlNc14C40G3464 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9K9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 9.120e-10
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    7 ERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            ERW+  EH +F+K +  +GR WKKI+  + T+T+ QVRTHAY Y AK+ R
Sbjct:   95 ERWTEREHALFMKGLLAYGRKWKKIQTLVQTKTVVQVRTHAYGYFAKLLR 144          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: B4FVU9_MAIZE (Protein REVEILLE 1 n=4 Tax=Zea mays TaxID=4577 RepID=B4FVU9_MAIZE)

HSP 1 Score: 61.2 bits (147), Expect = 1.500e-9
Identity = 26/56 (46.43%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            T SK+ E+W+ DEHR+FL+A+ QHGR W++I+  + ++T  Q+R+HA  + +KV R
Sbjct:   53 TISKQREKWTEDEHRLFLEALRQHGRAWRRIQEHVGSKTAVQIRSHAQKFFSKVIR 108          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A835BMQ2_9POAL (Uncharacterized protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835BMQ2_9POAL)

HSP 1 Score: 60.5 bits (145), Expect = 2.770e-9
Identity = 25/56 (44.64%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            T SK+ E+W+ DEH++FL+A+ QHGR W++I+  + ++T  Q+R+HA  + +KV R
Sbjct:   29 TISKQREKWTEDEHKLFLEALQQHGRAWRRIQEHIGSKTAVQIRSHAQKFFSKVIR 84          
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Match: A0A3L6FPD6_MAIZE (Protein REVEILLE 1 n=5 Tax=Zea mays TaxID=4577 RepID=A0A3L6FPD6_MAIZE)

HSP 1 Score: 60.5 bits (145), Expect = 2.810e-9
Identity = 25/56 (44.64%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWYLAKVER 56
            T SK+ E+W+ DEH++FL+A+ QHGR W++I+  + ++T  Q+R+HA  + +KV R
Sbjct:   51 TISKQREKWTEDEHKLFLEALQQHGRAWRRIQEHIGSKTAVQIRSHAQKFFSKVIR 106          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|128954 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z544_9STRA1.360e-33100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z6K2_9STRA1.250e-2273.58Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2D4BZS8_PYTIN5.820e-1255.56Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A2D4CHR8_PYTIN7.220e-1255.56Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1V9Z3Y4_9STRA3.520e-1155.10Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A0C6WCU0_9POAL4.690e-1044.44ScMYB57 protein n=1 Tax=Saccharum hybrid cultivar ... [more]
F0W9K9_9STRA9.120e-1052.00Uncharacterized protein AlNc14C40G3464 n=1 Tax=Alb... [more]
B4FVU9_MAIZE1.500e-946.43Protein REVEILLE 1 n=4 Tax=Zea mays TaxID=4577 Rep... [more]
A0A835BMQ2_9POAL2.770e-944.64Uncharacterized protein n=2 Tax=Digitaria exilis T... [more]
A0A3L6FPD6_MAIZE2.810e-944.64Protein REVEILLE 1 n=5 Tax=Zea mays TaxID=4577 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 5..53
e-value: 4.9E-8
score: 42.7
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..51
score: 7.073359
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 8..48
e-value: 1.48582E-6
score: 37.9402
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 8..50
e-value: 5.1E-11
score: 42.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..55
score: 17.488312
NoneNo IPR availableGENE3D1.10.10.60coord: 8..55
e-value: 1.0E-14
score: 56.3
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 4..50
e-value: 3.6E-10
score: 38.0
IPR017884SANT domainPROSITEPS51293SANTcoord: 4..54
score: 11.005564
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 4..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_222contigContig_222:136125..136292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|128954mRNA_17452Tribonema minus UTEX_B_3156 mRNAContig_222 136125..136292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|128954|gw1.222.1.1 ID=Trimin1|128954|gw1.222.1.1|Name=jgi.p|Trimin1|128954|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=56bp
TQSKRAERWSSDEHRVFLKAMTQHGRDWKKIKAQLPTRTLTQVRTHAYWY
LAKVER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR017884SANT_dom
IPR009057Homeobox-like_sf