mRNA_9920 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349939
Unique NamemRNA_9920
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349939 vs. uniprot
Match: A0A836CCT3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT3_9STRA)

HSP 1 Score: 613 bits (1580), Expect = 1.630e-221
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 1 
Query:    1 MQTSLMSLALMLAPLLLCGAIEPPERVLPSQSLAEAAAGLDIGCNKGVLTVTQLDMGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQASMCRQDARCGVRYISDDPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLNPCQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK 933
            MQTSLMSLALMLAPLLLCGAIEPPERVLPSQSLAEAAAGLDIGCNKGVLTVTQLDMGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQASMCRQDARCGVRYISDDPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLNPCQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK
Sbjct:    1 MQTSLMSLALMLAPLLLCGAIEPPERVLPSQSLAEAAAGLDIGCNKGVLTVTQLDMGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQASMCRQDARCGVRYISDDPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLNPCQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK 311
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BLAST of jgi.p|Trimin1|349939 vs. uniprot
Match: A0A836CBA5_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA5_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 1.420e-152
Identity = 204/294 (69.39%), Postives = 228/294 (77.55%), Query Frame = 1 
Query:   79 VLPSQSLAEAAAGLDIGCNKGVLTVTQLDMGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQASMCRQDARCGVRYISDDPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLN---------PCQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK 933
            +LPSQSLAEAA GLDI C++GVLTVTQLDMGAGLCP+LVCCPKNCPLCADRANCLKHADDPSCCPK DIAT+L HIDTGLSDIEVSCRYKAPPCTMPPADDPCV    ++CRQDARCGVRY+SD PSYVQGT+TSTD+GCIG E+YCACP GFTG RCERKCKKGQT CGY      SK F PNDICCAR++VC++V E +G+ T CLP+G P                          +KCT +         PC+NGG+CVNLN +QQ QY AYVCRCAKGFHG LCQ+KDK
Sbjct:    1 MLPSQSLAEAAPGLDISCDRGVLTVTQLDMGAGLCPLLVCCPKNCPLCADRANCLKHADDPSCCPKPDIATSLQHIDTGLSDIEVSCRYKAPPCTMPPADDPCVDRHGAVCRQDARCGVRYVSDAPSYVQGTSTSTDSGCIGAEAYCACPEGFTGPRCERKCKKGQTPCGYGYSPVRSKSFGPNDICCARDRVCVKVGEHWGYNTRCLPKGRP--------------------------QKCTPSKFTHPQVPDPCRNGGKCVNLNYWQQPQYAAYVCRCAKGFHGPLCQYKDK 268
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BLAST of jgi.p|Trimin1|349939 vs. uniprot
Match: A0A836CBW0_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW0_9STRA)

HSP 1 Score: 374 bits (961), Expect = 1.190e-124
Identity = 189/311 (60.77%), Postives = 211/311 (67.85%), Query Frame = 1 
Query:  100 AEAAAGLDIGCNKGVLTVTQLDMGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQAS--MCRQDARCGVRYISDDPSYVQ------------GTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQ----------VCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLNP---------CQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK 933
            A A+  LDIGCN+GVLTVTQ+DMGAGLCP+LVCCPKNCPLCA+RANCLK+A +PSCCP++DIA TL  IDTGLSDIEVSCRYKAPPCTMPPADDPCVG      +C ++ARCGVRY+SDDP YVQ            GTTTSTDNGCIGTE YC C    TG RCERKCKKGQTACGYE   Y SK F PNDI  ARN           VC RV E++GF T CLP+GHP                          KKC+ +P         CQNGG+CVN+N  Q  QY AY+C CAKGFHG LCQ+KDK
Sbjct:  212 AAASQRLDIGCNRGVLTVTQVDMGAGLCPLLVCCPKNCPLCANRANCLKNAKNPSCCPEKDIAATLQRIDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQEDLAYYALGGVQGTTTSTDNGCIGTEFYCECAKDVTGSRCERKCKKGQTACGYEFDPYRSKDFRPNDI--ARNAPMSGYRHTVLVCERVGEKYGFTTKCLPKGHP--------------------------KKCSPSPWAHPQLPDPCQNGGKCVNINSNQVAQYAAYLCDCAKGFHGPLCQYKDK 494
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BLAST of jgi.p|Trimin1|349939 vs. uniprot
Match: A0A836CAP6_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP6_9STRA)

HSP 1 Score: 343 bits (880), Expect = 2.760e-116
Identity = 163/258 (63.18%), Postives = 183/258 (70.93%), Query Frame = 1 
Query:  166 MGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQAS--MCRQDARCGVRYISDDPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLNPCQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK 933
            MGAGLCP+LVCCPKNCPLCA+RANCLK+ADDPSCCPK+DI T+L  +DTGLSDIEVSCRYKAPPCTMPPADDPCVG      +C ++ARCGVRY+SDDP YVQGT+TS DNGCIGTE YC CP G TGRRCERKCKKGQTACGY        GF P         VC+RV E +G+ T C+P+GHP                               +PCQNGG+CVNLN +QQ    AYVCRCAKGFHG LCQ+KDK
Sbjct:    1 MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGY--------GFDP---------VCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLP-----------------DPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK 224
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349939 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CCT3_9STRA1.630e-221100.00EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A836CBA5_9STRA1.420e-15269.39EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A836CBW0_9STRA1.190e-12460.77EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A836CAP6_9STRA2.760e-11663.18EGF-like domain-containing protein n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_52contigContig_52:139720..146072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349939|estExt_Genemark1.C_Ctg_520020
GOsGO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0008150,GO:0010810,GO:0010811,GO:0030155,GO:0044877,GO:0045785,GO:0048518,GO:0050789,GO:0050839,GO:0065007
Preferred nameEDIL3
Descriptionintegrin binding
COG categoryT
Max annot lvl33208|Metazoa
EggNOG OGs28MRG@1|root,2QU9M@2759|Eukaryota,38FY9@33154|Opisthokonta,3BBAC@33208|Metazoa,3D0TY@33213|Bilateria,488VH@7711|Chordata,48ZN4@7742|Vertebrata,3J9E3@40674|Mammalia,35P54@314146|Euarchontoglires
Evalue3.1e-05
Seed ortholog246437.XP_006143541.1
Hectar predicted targeting categorysignal peptide
TranscriptId350261
TrackFilteredModels1
ProteinId349939
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349939gene_9920Tribonema minus UTEX_B_3156 geneContig_52 139720..146072 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349939Trimin1|349939|estExt_Genemark1.C_Ctg_520020Tribonema minus UTEX_B_3156 polypeptideContig_52 139720..146072 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9920_7exon_9920_7Tribonema minus UTEX_B_3156 exonContig_52 139720..139923 -
exon_9920_6exon_9920_6Tribonema minus UTEX_B_3156 exonContig_52 139988..140065 -
exon_9920_5exon_9920_5Tribonema minus UTEX_B_3156 exonContig_52 140971..141156 -
exon_9920_4exon_9920_4Tribonema minus UTEX_B_3156 exonContig_52 141809..141935 -
exon_9920_3exon_9920_3Tribonema minus UTEX_B_3156 exonContig_52 142988..143119 -
exon_9920_2exon_9920_2Tribonema minus UTEX_B_3156 exonContig_52 143731..143824 -
exon_9920_1exon_9920_1Tribonema minus UTEX_B_3156 exonContig_52 145958..146072 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9920CDS_9920Tribonema minus UTEX_B_3156 CDSContig_52 145958..146072 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9920 ID=mRNA_9920|Name=jgi.p|Trimin1|349939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=936bp|location=Sequence derived from alignment at Contig_52:139720..146072- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGACGAGCCTGATGTCCCTGGCGCTGATGCTGGCGCCTTTGCTGCT
GTGCGGCGCAATAGAGCCTCCTGAGCGAGTGCTGCCATCCCAGAGCCTTG
CGGAGGCAGCAGCAGGGCTGGACATTGGCTGCAACAAGGGTGTGCTAACC
GTGACGCAGCTTGACATGGGTGCCGGGCTGTGCCCGATGCTGGTCTGCTG
CCCCAAAAACTGCCCACTGTGCGCGGACCGCGCCAACTGCCTCAAGCACG
CAGACGACCCGTCGTGCTGCCCGAAGCAAGACATCGCGACCACGCTGCTG
CACATCGACACGGGCCTGTCCGACATCGAGGTCTCGTGCAGGTACAAGGC
GCCGCCCTGCACCATGCCGCCCGCGGACGATCCATGCGTCGGCACGCAAG
CGTCAATGTGCCGGCAGGACGCGCGCTGCGGCGTGCGCTACATCAGCGAC
GACCCCAGCTACGTGCAGGGCACGACAACTTCCACCGACAACGGCTGCAT
CGGCACCGAGTCCTACTGCGCGTGCCCCGCGGGCTTCACCGGGCGGCGCT
GCGAGAGGAAGTGCAAGAAGGGGCAGACGGCGTGCGGCTACGAGGTCATC
TCGTACCACTCCAAGGGCTTCACGCCGAACGACATCTGCTGCGCGCGCAA
CCAGGTCTGCATGAGGGTCGCCGAGCGCTTTGGCTTCAAGACTCTGTGCC
TGCCAGAGGGGCACCCCAATGATTCGGGCACTGTCTGCGTGAGGGTCGCC
GAGCGCTACGGCTTCAAGACTCGGTGCCTGCCCAAGGGGCACCCCAAGAA
GTGCACGCTGAACCCCTGCCAGAACGGCGGCAGGTGCGTCAACCTCAATG
AGTACCAGCAGGATCAGTATGGCGCGTACGTGTGCCGCTGCGCCAAGGGG
TTCCACGGGGCGCTGTGCCAGTTCAAGGACAAGTGA
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protein sequence of jgi.p|Trimin1|349939

>Trimin1|349939|estExt_Genemark1.C_Ctg_520020 ID=Trimin1|349939|estExt_Genemark1.C_Ctg_520020|Name=jgi.p|Trimin1|349939|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=312bp
MQTSLMSLALMLAPLLLCGAIEPPERVLPSQSLAEAAAGLDIGCNKGVLT
VTQLDMGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLL
HIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQASMCRQDARCGVRYISD
DPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVI
SYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTVCVRVA
ERYGFKTRCLPKGHPKKCTLNPCQNGGRCVNLNEYQQDQYGAYVCRCAKG
FHGALCQFKDK*
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mRNA from alignment at Contig_52:139720..146072-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9920 ID=mRNA_9920|Name=jgi.p|Trimin1|349939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6353bp|location=Sequence derived from alignment at Contig_52:139720..146072- (Tribonema minus UTEX_B_3156 )
ATGCAGACGAGCCTGATGTCCCTGGCGCTGATGCTGGCGCCTTTGCTGCT
GTGCGGCGCAATAGAGCCTCCTGAGCGAGTGCTGCCATCCCAGAGCCTTG
CGGAGGCAGCAGCAGGTAAGCGGCAAAATTGCAGGCAATCATTTTAATCG
TGGCGAGAAGTATTGTAAGCGCTGAAGGGAGACCTGGCGTTGAATGCTGT
TGAAGGTATCATATGATTTGCATGCTGGTACTAGCACCTGTTTTTACGAG
ACTTCCGTTGTATCTCACTTTGTACATCATCTTCACCATGCGAGACTTGT
GCATATTGTCCCTGATTAATGGGTCAATGAATTCAGGATCTGGCTGCCTG
GTATCTTTTGCACCAGCAATGAATCAGTCATCGATAAACCGAACACCGGC
TTGCGGATCCTGCAGCATGCATCCCCACACACACCTCCAAGTGCCTCAAC
TGGTGCTCTTGCACACACACAAAGCCACAAAATGAGGCCAGTGCAGAGGC
AGTTGTAGGAGCTCGGACTCAACTCTGAGTCAGGTTCAAGTTGTCTTTAC
ATCTGACTGAAGATCAAATGATGACGTGAAGAGCACACCAGTGTGACTTT
CAGACTCTGTCGGACTTGGGGCATATTTTCAATCTCAGTTACGAAGATGA
CTCCTGCTAGTGATCTTCTTGAAGTTCAACTCCAACATGAAGTTTGAAAT
GGGGCTCCCGTGCTGAGTCACTATGCAATCCTGAACAATCTCAACACAAT
CAGTCACATCATAACCTCTGAGTCAACATCATGTAATAATGCAGCAGCGA
CCGCTGGCAGGGTTAGCAGACTTCAAGTTGGCCAATTCAGAAGCGTTTTT
TAAACTTACAGTAGGTCCTCTTCTCCAAACTTTGAAGCCACGTCCTGCTC
TTGCAATTCAACTTGAAACAAGATACTTCTTTATGCAGTCTCCCCAATGG
GTCCCATGTCGCAGCCACTCAGACTCTCGGAGACTCAGTCTGTCGTTGAG
TTACCGACATCCCGGCCAGTGAGTGACATAAATTTTGAATCACTGGAGCA
CGGTGAGCTTTGAGCACGAGATGAGATGAAGCCGAAGGCGTACTATTAGT
AGGTTGGGGGGCTCAGGCTGCGCAACGGAGCGCGTTGTGGTGGCCACAAA
AGATCCGGACCGGGTTCTGAATCAGTCGACTTGAATGCGGTTCTAAGACT
TCTCCATTCAAATTGAATGTTGAACTGAGGAGGCAATGGCCGGGCATCCA
ATGGGCCATGCATGCCATGTATTGCCCCGGGCCACGGCGGCTGTGCGCAA
CTTGGACCTTCTTTCATTGTTACTAAGTAGTACTCACTGACAAACTGACG
CTGACGCACCTATCATATAGTGCGGCACGAGCTGGAACTGATGGCAACAT
GTTGCAGAAACTTGAACACGACCATGTTACATTGTGTGCGTCCTTGCGGC
AGATTTTGAACATAACAATGCATTCAGCACAATTGCCGCTGTGCCAGCTG
CGGCCATGTTACTGCATGCCAGGGCAATATGACATAATTTCAGCCCCAGG
TTGACACTACTCAGTCTCGTAAGCTGCACATTCAATCTGTCAAGAGTCAA
CTTACTGCCTGTCACTCACAAAGTGAATTGCGTGCTGTCGAGTTGGCTTT
CACACAGCGCGTCCTCAGTGGGGGTTTTCCTGACAATGAGCGCACAGCGC
AGGGCCGCTGGCTCACATTGTTTTGCGGCCAGGCACCGGTGCAGAACTGG
AGCACTCTTCATGTCATGATGGCACGTGGACGCTACTGATGCCACATGCC
ACAGCATGCGTGCGTGCGGGCCCTCACATGAGGTCAAGAGCTAAAGTTGC
GCTATCAGGCCGTCACGTTTCAGAACTTCAATTGAATGCAGAAGCCCTCA
GTGACAGCCGATGCTTGTTACTGTCCACTTGACCACGTTATCATCCCCAC
AATGTCAGCCAAAAGCTGTCTTCAGGCCGGTTGCGCAGCTCATCAACTGT
GACTGTTTGCCTCCCCCCCTCCCCCCCCCAGCACACACACACACACTCAC
TGTGACACTTAAGGAATTTCCTCTCCACTTAAGCAGGTCATAGCCCCCCC
CCGTGGTGCGTGACACTCTCAGCCAAGAGCCGACCCCGGGCCGGTGAAGC
AGTCCATCTAATTACTTCTATGCAGTATTTCATGCATCTCCCCCTCCCCC
CCCCCCACGCACACACTCCCCCGGGCCTCTTGTCGTGAACCGCCGCAGGG
CTGGACATTGGCTGCAACAAGGGTGTGCTAACCGTGACGCAGCTTGACAT
GGGTGCCGGGCTGTGCCCGATGCTGGTCTGCTGCCCCAAAAAGTGAGTCA
CTCGCGCCCCCTCCAAGAGTGACTCAAGTGTGCGCCATGCTCCACAAGTT
CGCGCAGCACTCATTGGGCACGACAGCATACGTTCATTGACAAGGGGGGG
GTGAGTCAGTGCAGGGCAGATCTTCTGCGCTGCATGATAGTCGGGCATGC
TGTGCACTGCTGTGGAGCAGCTGCCTACCGGCTGCTCTGTTGAATGGCAG
CAACTGCCACGTTGCAGATTGTACCACGAGGTTGTATTGCTGTTGTAGGT
GTGACTGCCCTTGGCTGCCATCTGCACCATTCATGTGCTGAAGTGCACAT
GGTGTCACTACTGACCGCATCGCTGCCATTGCCACGGTTGCTTTGAAGCT
TTATATATCGACCTGCTTTACAGGACGGTCTCTTAGGACCTGCGGCCCAC
CAATTCAACAGCAGACAAAATGTATCAAAACTAAAAATAAAGTCGCTTGT
GACACAGCGCACGACAGGTGTTGGACTCAACATAAGTATTCCAGGCCCGT
GGTATGACGAAGCTGTTGCCTCCAGCGCGCGCCTTGGAGAGTCGGGTGTC
GGCGCCGCCTCCTAATACCCCATCATTTTCTGGTATACACTTGGCTGCTG
CAGCTGCCCACTGTGCGCGGACCGCGCCAACTGCCTCAAGCACGCAGACG
ACCCGTCGTGCTGCCCGAAGCAAGACATCGCGACCACGCTGCTGCACATC
GACACGGGCCTGTCCGACATCGAGGTCTCGTGCAGGTAAACAAAATTACA
AGCAACTATCAGCAACTATACGCATTCGGGCAAGTGCGTATTGCGCATAC
CATAGGTATGTCAGTTATATTCACCATCACTGTACGGTACATGCGCCGCA
GCGCGCTTGAAGTGGGCTTCTGGTCCCGCTCCCAGGTTTCCTACAGGTGA
TAAGGAGCAACAATTAGCGTCCGCTTCGCGCTCCATGTTTGGGTAGCCGT
CGTGTTGCGCATACTGTATGCAAGACTTTGTGTTGGAAGTCGCCTGCAAG
TGGGTGTCCGTGCGCATGGACCGCATGCTGCATGCCTCAAATCAACGCAC
TTGACGCGCCTCAGGCGGCCTGGGTGCAGCACATGTGCAATCACATTCAC
TGTGGCACAGCACGTGTTTCGCGCGTGAATGAGTTGTACGGTGCTGAACC
ATGCAGCGGCAGAGCACCGCCAAGTGACGTCCGAAGAACTCTCAACTGCG
TCCTCATCAAAACGCGGCGCCATCGACTCTAAGGCACCCTGCCCGACGCA
TGATGATGCTCAGCGCCTGCAAGTACTCTGATCGTTGACTGCACTTTGCG
CTGATCTTGCGCGTCAGCATGCGTTGAAAGTATTCCCACTCACACTTGCA
TACCGATAGCAGGGCGTTACAGAAACCAGACCCGCCCCGCCCCGCGCGCC
TTCGCACCACAACCAAAGCGTGCAATGCACGTGCCTCACGCGCAAAGCAG
CGCCATGCGGGCGGCGCAGTGCCACAGCCCTGCTGACTGCGTGGTGGCAA
CGGCTTGCTGGGCGCTGATGCTGCAGGTACAAGGCGCTGCCCTGCACCGT
GCCGCCCGCAACCGATATACATGTAAGAAGTATGTTTTCCCCGCAAACTT
GTTCGGCTTACACGCAATGTCGAGAGTGACGCTGACTGCGCGAGCGCTGA
CGCTGCGCAGGTACTAGGCGCCGCCTTGCACCACGTCGCCTGCAGACGAC
AGGCATTAAAGCCCAGTTGAACTTCGAAGATGGAACGCTTTTTGAGGCCC
TGAACACTGACACTGAGCACTGCTGTTGCTGCTGCAGGTACAAGGCGCCG
CCCTGCACCATGCCGCCCGCGGACGATCCATGCGTCGGCACGCAAGCGTC
AATGTGCCGGCAGGACGCGCGCTGCGGCGTGCGCTACATCAGCGACGACC
CCAGCTACGTGCAGGTACGCCACTTCGTGCTCATGTAAAACGTGTACTGC
CGGTGTGTGCTGCACCATGGCCGTCTTTTGCCTGTTCTAGTTCCATTGTG
CGCTCTGGTGTACTACGCTCCCGGCCAAGTGCAGGCGCGGCGCCGGCCTT
GGGCGGTCGAGTCTTTGCTGTACTGCTCTCAATGAGTCAGAGGGGATCTC
GGTGTGGTGCAGGGGCCCTGCGCGGGACGCTCCTCTGCGTGCGATGCGCC
AATGTGTGGCACTGGGGCGAGGAGGAGAGAGGGGGGCAAGGCGCTGCTTG
CGTTGCAAACAAGCCAGGGCTCAGCGGGGCTCGAGGCTGCATCATGCTGA
GTCCTACTCCTAGAAGGTCGCTGTTAGGTACGCCGTGACCCCGCTGCTTG
AATCGCTCTGCCATCTGCGTCTCCCTCGCCCACCCACCCACCCCACGAAC
CCCATGCACCACTTCAATGCTGCTCTCACTTGCCATCCAGGGTACTTCAA
CTTCCACCGACAATGGCTGCATCGGCGCCGAGTCCTACTGCTTGAAGTAC
GCACTGACCCTGCCGTTTGAATTGTTCTTCCATTGCTCTCTCTCTCTCTC
TCTCACACACACACACATACCATGACCCCGATGCACCCCTCGTTGCTGCT
CTCAATCCCTCTCCAGGGCACGACAACTTCCACCGACAACGGCTGCATCG
GCACCGAGTCCTACTGCGCGTGCCCCGCGGGCTTCACCGGGCGGCGCTGC
GAGAGGAAGTGCAAGAAGGGGCAGACGGCGTGCGGCTACGAGGTCATCTC
GTACCACTCCAAGGGCTTCACGCCGAACGACATCTGCTGCGCGCGCAACC
AGGTCAGGAGACGAAGTGGCGCAGTTGAAGTTGCTGTGCAGTTTTGCGCG
TTTCTCATCGCGCGTCACGCCGCCTCGCCGTGTATGCAAATGGGGCGCTG
CTGCTGTTGACGTACAGGGGGCTGCGTGCCTGCGCATCTGACGTGTGCCC
CCCCCTTTTGTAAGTTTTCCCCCTCACTTAGGACACGAAGCAGCCCAGAT
TGTGGAAGTTAATTTTGCCATTATTTATGAATCTACATACTCAAGTCTGC
GTTGTGACATGGTGTCTTGATGCGCGCCAACTATCAATTCTACACGACGT
CAAAAAATGAACCCTCTCACCACTACATCCTCCATCTGTCCGCCCCCTGT
GGACGCCGCCACGTGTGTCATCAGACGCAAAGAGTGCGCCCTCCTTGTAC
TTCTTCTTAATCCATGCTTGGAGCCTGAAACGGCCCACATGTACGGGTTT
GCCACACCGTCAAGGTTGACTTGGGTGTTCCATCTAGGCATAGCGCTTGG
GATATGCGGCCCTATTACTGATCACTGCGACACGTTGCACTATGGTGCAT
ACATTGGTATGGGTGTTCACTGATCAGTCATACTCAAGTATGATACTTCT
TTGAAGTATCTGTCAACTACCTGTAAATGCACATGGATCTACACAATACG
GACTTACCAACACTTGTACTAGTGACCTAACCCCGCCGCTTGCAATCCGC
ACGACCAAGGCGCTCCGTACGCACGAACACACCCCGTGCGAAACTCTCAC
TGCGTCAACTATCCGTACGTATGAATGCCCCGCGTTAAACTTTCACTGTG
TTAAATATCTGACGTAATTTTTATGCCACCTCTAATGCAATCTCCCCTCC
CCCCCCCCTCCCCCCCTTGCAAACTAACTCTCCATTGCCCTCCCCCCCTC
TCCGCAGGTCTGCATGAGGGTCGCCGAGCGCTTTGGCTTCAAGACTCTGT
GCCTGCCAGAGGGGCACCCCAATGATTCGGGCACTGTGCCATCTTTCTGA
CGTCCCTCTCACGGAAACTCCTACTACCCCCCCTCCCCCCCCCCCGCAGG
TCTGCGTGAGGGTCGCCGAGCGCTACGGCTTCAAGACTCGGTGCCTGCCC
AAGGGGCACCCCAAGAAGTGCACGCTGAACCCCTGCCAGAACGGCGGCAG
GTGCGTCAACCTCAATGAGTACCAGCAGGATCAGTATGGCGCGTACGTGT
GCCGCTGCGCCAAGGGGTTCCACGGGGCGCTGTGCCAGTTCAAGGACAAG
TGA
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Coding sequence (CDS) from alignment at Contig_52:139720..146072-

>mRNA_9920 ID=mRNA_9920|Name=jgi.p|Trimin1|349939|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=936bp|location=Sequence derived from alignment at Contig_52:139720..146072- (Tribonema minus UTEX_B_3156 )
ATGCAGACGAGCCTGATGTCCCTGGCGCTGATGCTGGCGCCTTTGCTGCT
GTGCGGCGCAATAGAGCCTCCTGAGCGAGTGCTGCCATCCCAGAGCCTTG
CGGAGGCAGCAGCAGGGCTGGACATTGGCTGCAACAAGGGTGTGCTAACC
GTGACGCAGCTTGACATGGGTGCCGGGCTGTGCCCGATGCTGGTCTGCTG
CCCCAAAAACTGCCCACTGTGCGCGGACCGCGCCAACTGCCTCAAGCACG
CAGACGACCCGTCGTGCTGCCCGAAGCAAGACATCGCGACCACGCTGCTG
CACATCGACACGGGCCTGTCCGACATCGAGGTCTCGTGCAGGTACAAGGC
GCCGCCCTGCACCATGCCGCCCGCGGACGATCCATGCGTCGGCACGCAAG
CGTCAATGTGCCGGCAGGACGCGCGCTGCGGCGTGCGCTACATCAGCGAC
GACCCCAGCTACGTGCAGGGCACGACAACTTCCACCGACAACGGCTGCAT
CGGCACCGAGTCCTACTGCGCGTGCCCCGCGGGCTTCACCGGGCGGCGCT
GCGAGAGGAAGTGCAAGAAGGGGCAGACGGCGTGCGGCTACGAGGTCATC
TCGTACCACTCCAAGGGCTTCACGCCGAACGACATCTGCTGCGCGCGCAA
CCAGGTCTGCATGAGGGTCGCCGAGCGCTTTGGCTTCAAGACTCTGTGCC
TGCCAGAGGGGCACCCCAATGATTCGGGCACTGTCTGCGTGAGGGTCGCC
GAGCGCTACGGCTTCAAGACTCGGTGCCTGCCCAAGGGGCACCCCAAGAA
GTGCACGCTGAACCCCTGCCAGAACGGCGGCAGGTGCGTCAACCTCAATG
AGTACCAGCAGGATCAGTATGGCGCGTACGTGTGCCGCTGCGCCAAGGGG
TTCCACGGGGCGCTGTGCCAGTTCAAGGACAAGTGA
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