mRNA_9878 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352731
Unique Name	mRNA_9878
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352731 vs. uniprot
Match: A0A835ZA05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA05_9STRA)

HSP 1 Score: 1529 bits (3960), Expect = 0.000e+0
Identity = 851/851 (100.00%), Postives = 851/851 (100.00%), Query Frame = 1

Query:    1 MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISISHWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTAADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHCKVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEXXXXXXXXXXXXXXXXXXEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAAAAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWGEGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAGLTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSXXXXXXAGTVCGAVAKDGEAVCGGHGVCSXXXACECAAGYWGVKCENRCSDCSRHGLCRPDTGHXXXXXXXXXXXXXVRACPFDCYGHGTCDDGGLCVCAPGWSGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDETAMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAPQPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGATVGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLTGAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEPHVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDLLWRVAARSFHPLPSGGXXXXXEEDIGAGADEFEMTAAGRGGSSELDWRSLR 2553
            MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISISHWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTAADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHCKVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEXXXXXXXXXXXXXXXXXXEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAAAAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWGEGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAGLTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSXXXXXXAGTVCGAVAKDGEAVCGGHGVCSXXXACECAAGYWGVKCENRCSDCSRHGLCRPDTGHXXXXXXXXXXXXXVRACPFDCYGHGTCDDGGLCVCAPGWSGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDETAMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAPQPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGATVGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLTGAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEPHVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDLLWRVAARSFHPLPSGGXXXXXEEDIGAGADEFEMTAAGRGGSSELDWRSLR
Sbjct:    1 MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISISHWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTAADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHCKVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEXXXXXXXXXXXXXXXXXXEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAAAAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWGEGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAGLTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSXXXXXXAGTVCGAVAKDGEAVCGGHGVCSXXXACECAAGYWGVKCENRCSDCSRHGLCRPDTGHXXXXXXXXXXXXXVRACPFDCYGHGTCDDGGLCVCAPGWSGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDETAMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAPQPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGATVGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLTGAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEPHVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDLLWRVAARSFHPLPSGGXXXXXEEDIGAGADEFEMTAAGRGGSSELDWRSLR 851

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352731 vs. uniprot

BLAST of jgi.p|Trimin1|352731 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZA05_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_129	contig	Contig_129:339041..346347 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352731\|estExt_Genemark1.C_Ctg_1290050
Description	TIGRFAM Outer membrane protein
COG category	V
Max annot lvl	1224\|Proteobacteria
EggNOG OGs	COG2373@1\|root,COG2373@2\|Bacteria,1QV7E@1224\|Proteobacteria
Evalue	0.000253
Seed ortholog	395493.BegalDRAFT_0071
Hectar predicted targeting category	other localisation
TranscriptId	353053
Track	FilteredModels1
ProteinId	352731

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352731	gene_9878	Tribonema minus UTEX_B_3156	gene	Contig_129 339041..346347 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352731	Trimin1\|352731\|estExt_Genemark1.C_Ctg_1290050	Tribonema minus UTEX_B_3156	polypeptide	Contig_129 339041..346347 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_9878_1	exon_9878_1	Tribonema minus UTEX_B_3156	exon	Contig_129 339041..339142 +
exon_9878_2	exon_9878_2	Tribonema minus UTEX_B_3156	exon	Contig_129 339435..339785 +
exon_9878_3	exon_9878_3	Tribonema minus UTEX_B_3156	exon	Contig_129 340220..340814 +
exon_9878_4	exon_9878_4	Tribonema minus UTEX_B_3156	exon	Contig_129 341293..341586 +
exon_9878_5	exon_9878_5	Tribonema minus UTEX_B_3156	exon	Contig_129 341949..342115 +
exon_9878_6	exon_9878_6	Tribonema minus UTEX_B_3156	exon	Contig_129 343165..343259 +
exon_9878_7	exon_9878_7	Tribonema minus UTEX_B_3156	exon	Contig_129 344498..344663 +
exon_9878_8	exon_9878_8	Tribonema minus UTEX_B_3156	exon	Contig_129 345174..345416 +
exon_9878_9	exon_9878_9	Tribonema minus UTEX_B_3156	exon	Contig_129 345805..346347 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_9878	CDS_9878	Tribonema minus UTEX_B_3156	CDS	Contig_129 339041..339142 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_129:339041..346347+
coding sequence from alignment at Contig_129:339041..346347+

spliced messenger RNA

>mRNA_9878 ID=mRNA_9878|Name=jgi.p|Trimin1|352731|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2556bp|location=Sequence derived from alignment at Contig_129:339041..346347+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGGCAGCGGCGGTGTGGACAGCAGCAGCAATCCGTTTGGCAATGC
TTCCTTCATCACCTTTGAGATGATGACAACAAGAGACGATCTGCTTCTAG
AGTCCCTGACGCTTAATAACGCTCAGACGCCGGGCCTGATCTCCATCTCG
CACTGGGCGGAAGCCAACGCGGCGGCGGCGGCGGCGAAGCCCGGCAACTG
GCGCGACATCACAGCGCAGCTCTCGGATGCAGACTTTGTGCAGCCCGGCG
CGGTGGGTTGGTCCGGCCTCACATCTGCGCGCTTCGTCTTCAGCACTGCT
GCGGACGACAGGGACTCGACGGTGGCGTTCCGGCTGGCCAAGGTGTGCAA
GACCATGGCGGAGCCGAGCCTGTGCGTGGCGCGGCGGCAGTACGCGTACG
CGCTGCACGCGCACAAGTGCGACTGCGGCGTGTGCCACTCGTGCCACTGC
AAGGTGCAGGCCGTCTTCGACAAGGACGTCACGTGCGCGCACGGCGCCTG
CGACTCGTGCTGGTGCTCGCTGCTCGCCTCTTGCGGCTGCTGCTACGAGG
CCGAGTGCGCGTACGAGTGCGGCTGCCGCGCGTGCTTCGACACGAGCACG
GCGGAGGTCTGCGAGGCCGCGGTTCACTACGGCGCGGGCGCGGCGTCGCC
CGCGCGCGGCGCGCCCGCGGGCGGCCCTGTCGTCGCCGTCGCCGCCGCCC
CCGGCACCCAGTTCGCCGCCACCCAGGTCCTGTGCCGCTTCGGCGCCGCC
GCCGCCGCGCAGGGCTACTTCATTGCGCCGGATCGTGTGGCGTGCCTCGT
GCCGCCGCTGGCGGAGGCGGCGCCGGGCGCGGACGCTGCGCAGGGCAACA
TTACGGTGCCGGTCGCGGTGGCGCTGGGGGAGGGGGCGCCGGCGTGGGGG
GAGGGGGGCGCGGAGTTCACGTACGCGACGTGCCGCGGGGATGCGGACTG
CGGCGGCGGCGGCACGTGCGGCGCGGAGGATGGGGCGTGCGCGTGCGACG
CGATGCACACCGGGGACTTCTGCGAGTACACGTGCCCCACGGGGGCAGGC
CTTACTCAGCCGTGCAGCGGCTTTGGCGCATGCGACTTTGCGGCAGAATC
CGGCGGCGCCGTGTGCTACTGCGTCGAGGGGCACACCGGCGCGGGCTGCG
AGCAGGAGGACCTGGCGCCCGTTGCAGGCGGCGGCGGCAGCGGCGGCGGC
GGCAGCAGCGCCGGTACGGTGTGCGGAGCGGTGGCGAAGGACGGCGAGGC
TGTGTGCGGGGGGCACGGCGTGTGCAGCAGCGGCGGCGCGTGCGAGTGCG
CGGCGGGGTACTGGGGGGTGAAGTGCGAGAACCGCTGCAGTGACTGCTCG
CGCCACGGCCTGTGCCGCCCCGACACGGGCCACTGCGTGTGCTTCTCGGG
CTTCAGCGGCCCCAAGTGCGAGGTGCGCGCGTGCCCATTCGACTGCTACG
GCCACGGCACGTGCGACGACGGCGGCCTGTGCGTCTGCGCGCCGGGGTGG
AGTGGCCAGCCAACAATGTCATTCGTAGCAGTCAACGCCTCGTCGTACGC
GGCGATTGCGGGCGTTGGCGGCGCCCTTACAATCGCCGTGGTGCGCACAG
GCAGCCTGGCCGCCAACATATCCGTCTCCTATGCGACAATTGACGAGACG
GCTATGGCCGGCATCGACTATCGGGAGGCGCATGGGTCGCTAGCATGGCC
CGTCGGGGATGCTTCCCCGCGCTTTGTGGACATTACACTGCTGCCGCATC
CGCTGCCGGAAGTTGGGGAGGCGTCCTTCGTCTTTGCGCTAGCAGCGCCG
CAGCCGCAGCAGCAGTGCCAGCTCGGCGGCGGCGCCGCCGCGCGCGCTGC
GGTAAGACTGCAGAGCGACGGCAGCGGCGGCGCCGTGGAAGGCGCGGCGA
CGGTTCGCGTGACATTTCTCAGCGGGCGCGCGGACGTGGCGGGGGCGACG
GTTGGGGCGGAGAGGGACGTGTTCAAAGGCGACGTCGTGCGCATCATAGC
GTCGCTGCTCGCGGTGCCGCGCGCGCGCCTCTTCGTCGCGTCGGTCACCG
CGTACAGCGGCGGCGCGCTGATCGCGCTCGACATTTTGCCGCCGCTCACC
GGCGCCGGCGCCGCCGCCGCGGAGGTCAACGCGGCGCTGCCCTCCGCCGC
CGTCGCCGCCGCGCTCGTCCAGGCGATCGCCAGCCCCGGCAGCGAGCTCT
ACGGACACGCCGCGAGAGTGAAGCTGGCGGTGGACCCGGCGTACGAGCCC
CATGTGCGCGCATCGTCGGCGGCGGCAAGTGCAACCGACGGCCGGTCACG
GGGGGGTCATGGCGCGCGCACCACGGCGATCGCGCTGTCGCTGCTGCTGG
CGGCGCTCGTGGGCGTCATGGCGGTGGCCTTTGTGAAGCGGCGCGACCTG
CTGTGGCGCGTGGCGGCGCGCAGCTTTCACCCGCTGCCCAGCGGCGGCGG
CGGCGGCGGCAATGAGGAGGACATCGGCGCGGGTGCGGACGAGTTTGAGA
TGACCGCCGCCGGCCGCGGCGGCAGCAGCGAGCTGGACTGGCGCAGTCTG
CGGTGA

protein sequence of jgi.p|Trimin1|352731

>Trimin1|352731|estExt_Genemark1.C_Ctg_1290050 ID=Trimin1|352731|estExt_Genemark1.C_Ctg_1290050|Name=jgi.p|Trimin1|352731|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=852bp
MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISIS
HWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTA
ADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHC
KVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEAECAYECGCRACFDTST
AEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAA
AAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWG
EGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAG
LTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSGGG
GSSAGTVCGAVAKDGEAVCGGHGVCSSGGACECAAGYWGVKCENRCSDCS
RHGLCRPDTGHCVCFSGFSGPKCEVRACPFDCYGHGTCDDGGLCVCAPGW
SGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDET
AMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAP
QPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGAT
VGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLT
GAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEP
HVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDL
LWRVAARSFHPLPSGGGGGGNEEDIGAGADEFEMTAAGRGGSSELDWRSL
R*

mRNA from alignment at Contig_129:339041..346347+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_9878 ID=mRNA_9878|Name=jgi.p|Trimin1|352731|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7307bp|location=Sequence derived from alignment at Contig_129:339041..346347+ (Tribonema minus UTEX_B_3156 )
ATGGCTGGCAGCGGCGGTGTGGACAGCAGCAGCAATCCGTTTGGCAATGC
TTCCTTCATCACCTTTGAGATGATGACAACAAGAGACGATCTGCTTCTAG
AGGTGAGAGAGCTGCAATACATGTAGATTGCGGCGAAGGCTTGAGCTGGC
CTGCACCGCCGGCCTCACGACAGGCCGCTGACATTCATCACTCATCTGTT
TACCTGAAAGGCTCCCGTCCAAAACATAGTGGCCCCTATGAGCATCAGTA
GGCCTTGCATCAAGAGCTCTGAAGCTGTGCAAGCCCGCCTCATGAATCAG
CCGAGCACCGGACCTTCAGTAAGCCGCGCAATTCATGTGTTCAAGACACC
TGCGCATTGCACTGACGCGCTGCACGTGTTACACCGCCGCGCAGTCCCTG
ACGCTTAATAACGCTCAGACGCCGGGCCTGATCTCCATCTCGCACTGGGC
GGAAGCCAACGCGGCGGCGGCGGCGGCGAAGCCCGGCAACTGGCGCGACA
TCACAGCGCAGCTCTCGGATGCAGACTTTGTGCAGCCCGGCGCGGTGGGT
TGGTCCGGCCTCACATCTGCGCGCTTCGTCTTCAGCACTGCTGCGGACGA
CAGGGACTCGACGGTGGCGTTCCGGCTGGCCAAGGTGTGCAAGACCATGG
CGGAGCCGAGCCTGTGCGTGGCGCGGCGGCAGTACGCGTACGCGCTGCAC
GCGCACAAGTGCGACTGCGGCGTGTGCCACTCGTGCCACTGCAAGGTACG
GGGAAAGTGCAGATGCTACATATGGTGCCTGCTGTCGCTTCTGCTTCACC
TGATGATGCAAATAAGCTTCTCTTAAAGTGTGGTGCAGCTCTGCTTAGTT
ATTAGACCTCAGCGTCCTGACCTTGTGCATCAGGAGGACTGCGCATTGCA
AGCTGGCCTATATGCATTGCTGCAGGTGGCACTTCCGAGATCTTGTTTGC
AAGTCCGATTCACTTATGGAATGCGACAGGCCTTTGTCCACAGCAGCAAC
CTCAATGCACGCAGAGGCTCCTCTTCTTGCTCTCCGCGTCATCAAGTGCG
CAAGCGTATGAAAGTTGGGCTACACCACTTGGTGCCTGCCTTGGCATCAT
CATGTCCAGTAGCCCACACAACCATACGCAACTCCGACGCGCCGCCGGGG
GCCCTGCCCGACTGTGCGCGCCGCCGCAGGTGCAGGCCGTCTTCGACAAG
GACGTCACGTGCGCGCACGGCGCCTGCGACTCGTGCTGGTGCTCGCTGCT
CGCCTCTTGCGGCTGCTGCTACGAGGCCGAGTGCGCGTACGAGTGCGGCT
GCCGCGCGTGCTTCGACACGAGCACGGCGGAGGTCTGCGAGGCCGCGGTT
CACTACGGCGCGGGCGCGGCGTCGCCCGCGCGCGGCGCGCCCGCGGGCGG
CCCTGTCGTCGCCGTCGCCGCCGCCCCCGGCACCCAGTTCGCCGCCACCC
AGGTCCTGTGCCGCTTCGGCGCCGCCGCCGCCGCGCAGGGCTACTTCATT
GCGCCGGATCGTGTGGCGTGCCTCGTGCCGCCGCTGGCGGAGGCGGCGCC
GGGCGCGGACGCTGCGCAGGGCAACATTACGGTGCCGGTCGCGGTGGCGC
TGGGGGAGGGGGCGCCGGCGTGGGGGGAGGGGGGCGCGGAGTTCACGTAC
GCGACGTGCCGCGGGGATGCGGACTGCGGCGGCGGCGGCACGTGCGGCGC
GGAGGATGGGGCGTGCGCGTGCGACGCGATGCACACCGGGGACTTCTGCG
AGTACACGTGCCCCACGGGGGCAGGTGAGAGGGGGCGCGGGTGCTGACTG
AAGTGGGGTGCATTGGTGCTGTCACACTCTGGCATTTGCGTTCTGTTCAC
ACCTTAAGTATATCTGTTTGTGGATTTGTTGCGCGTTGGGATGCCTGCAT
TGGAAGGTGGTGTTTCTTGCGCCACTGGTCGTGTTCTTGTGCGCGCTGCT
GCGCCACCGTGGTTTTGCGCACCCATTACTGCTCTGCACGCCGCGATCGC
AGCCCACCACGCAGTCCACGAGTAGTACGTTGGTGTACATATGCAGTCCA
CAAGCAGTACACCAAGCCATGCATGGGGTCTGAGGCAACTACGCAGAGGT
GCGCAGCCAGCCTGTGCCCAGCTCGTCCGTCACATGCCATGTGTACCTAA
TCGCTAGCCTGTCCGCAGGCACGTGCCGACAAACCAGAGCTGCGCGCTGA
GACGCAAAGACTTGAGTCGCAACTCCTCGCCACCGCCGCTGCGCCTCCCC
AGGCCTTACTCAGCCGTGCAGCGGCTTTGGCGCATGCGACTTTGCGGCAG
AATCCGGCGGCGCCGTGTGCTACTGCGTCGAGGGGCACACCGGCGCGGGC
TGCGAGCAGGAGGACCTGGCGCCCGTTGCAGGCGGCGGCGGCAGCGGCGG
CGGCGGCAGCAGCGCCGGTACGGTGTGCGGAGCGGTGGCGAAGGACGGCG
AGGCTGTGTGCGGGGGGCACGGCGTGTGCAGCAGCGGCGGCGCGTGCGAG
TGCGCGGCGGGGTACTGGGGGGTGAAGTGCGAGAACCGCTGCAGTGGTGA
GTCACCGAGTACCAGTGGCAGTGCTCCGGTAGTTTAGTATTTGGGCAAGG
GTGTTGTGCGTGATGTGCGTAACATGCGGGGCTGAGAGAAATGGGTGCTG
TGGGTAGGTGATGAGGGCAGATCGACGTCACTGGACACAATGCAAGCTTT
CTGTGGGACCAAAGCTTCGTGCATTAGACCGCCTTCACCTTGTTGCTCAT
ACGTTCCATGTCACCATTTGAACCTGACATAACCTGTTCTCTTGTCCTGT
AGTGGGGCTAAGCTCTTCAATTGGGGAGCATTCCCGTTCGTTCTGCTGCT
GTGCACTGATACCACGCTGCGTCGCCGAACATGCATGCACTACCCTGCTT
CGCCACAGACTGCTCGCGCCACGGCCTGTGCCGCCCCGACACGGGCCACT
GCGTGTGCTTCTCGGGCTTCAGCGGCCCCAAGTGCGAGGTGCGCGCGTGC
CCATTCGACTGCTACGGCCACGGCACGTGCGACGACGGCGGCCTGTGCGT
CTGCGCGCCGGGGTGGAGTGGCCAGGTATGTGTGTAGCGGTTCGCGTTTG
AGCCATATACCTGCCTATACATCAAGCCCCCCTTACGGCAGTGCTCATGT
GTCGTAGTACAGGTGCTCGCCTGGGTGGAGTGGCCAGGTATGTAGCGTCT
GAACCCTATACGTACCTATCTATACAGCAAGCCCTTCTTGCGGCAGCGCT
CATAATGCGAGTCAGAAGCTGCTCCCACCCCCACAAGTGGCCTGCATTGC
TGCGGGGACGTGTGCTGCCAGCCGCGGCTTTTGAGAAGCCTTTTTTTGCG
AAGGTGTCGATATGTGCGGTATCGATGCTGCTCCTCGGGCTTCACAAGGC
ACTGATGCTGTTGGTCTATGCAAGTGTCGATTCATGTCAATGATTGTGCT
CTTTGAAACATGCTGGTCACTCGTTGCATTGAAGCAAACAGAGTACACGC
GGTGCAATGGCGCAGCAGCTGACAGCACTGCTTTGGGGCACACTCGGATC
ACTCACTTGTGCAAGCACTTGAGGCCGAACGCATCAGTGGTTATTACGAC
AAGTGCATAGCTGCATGTTGTTTATTACTACATGACATCTCCAACTTGCT
GCGAAGCGGCTCAGTGTGCAATGAGACCGTATGGAACGCCACCGTTTCAG
TTGCCAGTGAGCAAATGCAGTCAACGTTGCTCCTGACTGACCATGCTGGC
TGGCTGCATGTCACGACCGCGGCACTGTGGCAATGCCTTGCTGCAGCAGC
CATTCCCCAGTGGGGGCCTTGGAGCACAATCTCTTCGCAGTCGTGTGTGC
ACTGGTAGCGTGGTTGGCGCACCGCCGTGCCTTGCACCTCGCACGTGCTG
TTCCTAGTTGCACACGCCTGGCTACACCTTGCTGCACTTTTTGGTTCTCG
TTGACGTGCATGGTGCTCGGCGCTATCTTTGCTGCACTGTGCATGCGTTT
GGCTGGTGGTCATCCCTGCTCATTGCGAGCCACAACTTGTACAAACACAT
GCCTGACGCACGTGCCCCCCCCCCCCCCCCCGCTTAAAAAATGGCAGTTT
TGCAGCGCGCGTGACATCCCCAAGCCAACAATGTCATTCGTAGCAGTCAA
CGCCTCGTCGTACGCGGCGATTGCGGGCGTTGGCGGCGCCCTTACAATCG
CCGTGGTGCGCACAGGCAGGTGTGTTGATTCGTTTGTGGTTGCTGCATCA
CGTTGATTGCTTGGTACATAGTGTAATGTCGAGCAAGTGTCGGCCATGTG
CATCCACCATGACAAGGGGAGTGTGGCAGTGCTTTGAGGCTGTCTCTCAG
AGTGGTGTATGCCGCATAAGCCCCGGTCTCTAGCACCTTGACCGCGTACG
CCTGGGGCTGCGTGTCAATGGCAGTTTGAGTTTGAGTCGCTCCCCACACA
CCCCCTTCAAATCCTGCACCTAATCGTCTCTTGAAGGAAAGACGGCCGCA
AGGTGTGCCAATAGGATCCTTAGGCACGCGAATGGTCAGATCCATCGCCC
TCCCGCGCGTTGGCTGCGTTGTTGTGTGTGGATTTTTGGGTACGTGTGTC
AATTGCTGTACTAGCAATTTTCTCGCTCGCTGAAATAGAGGCGCCTGTGT
ACTGCTGCCAGCTCTGCGTTGCTGCCGCCAAGGCTCTCTCCTGAGGTCAG
GGATACGTCTGCGCTCCCTGACGCTCATGGCGCTGCCTTGAATGGCAAGT
ACCTGGACGAAAGTGAAAGCTTTATTAGGCTTGCTGGGTAGCAGCCGCTG
GCTGGGTTGATGCAAGCGTTAGCTGACGGACTGTCCTGACTGCTTGCTTC
AACTTTACTCAACCATCATGTCATCATATACTTGAAGTACTATGTGTACA
TACCATCAGCTCAATACCATTGTGTGTAGGGGACGCATGTGTGAGCTCAG
AGCGTGCAGCTCATCGCTGATATACAACACAAGTCTCTAGCATGCCCAGC
GCGCCATGTGCAGCAGTTGTCTGCAGCATCATCAGCTCAGCAGCAGATCA
TGTAAGTGAGACCGTCCGCTTGTTTATATCAGGCACTCGTCGCCCTGGTA
CCCTGGTTCGATGCAGCGGTCCAGCGCTCGATTCAAAGCATGCGGCCAAA
AAAGCATTCTGTCGCCATCAGAGGGGGCGATCGCCTGCTGTGCCCCCAGT
CAGCCACCAGCGCGCAGCAGCCGTGCGCCGATGGCACTATGCATGTCGCA
TATGAGACATGCACACAGCATGGACGAGAACATTCATGCTCAGCTCTAGC
AGAGAGAGACTCTTTGGAAACAGGCCTGCGCTCAAAGATACAGCAACACA
TCGCATTGGTGCCATAGTCGTGAAAGTGCTGCGCGGCAATCGTGTCACTG
TCGCTGCTGAACACCATTATAATTGCCCCACGTCCCCTACTGCTCTGCGC
TCCGCAGCCTGGCCGCCAACATATCCGTCTCCTATGCGACAATTGACGAG
ACGGCTATGGCCGGCATCGACTATCGGGAGGCGCATGGGTCGCTAGCATG
GCCCGTCGGGGATGCTTCCCCGCGCTTTGTGGACATTACACTGCTGCCGC
ATCCGCTGCCGGAAGTTGGGGAGGTCAGTTCCCGTCGACCCTGAGCCTTG
CTCTGACAATAGCAGCGAGTGGTCCATGCGACGCGTGTGCTTGCCGCTGC
GGGATGCCGGACACCCGCAGGCCATTGCCTTGCCTTGCGTGATTGTACTT
GGCACTTGGACACGGCTCAATGTGCAAGGCATGTGCGGTGATTTGGACAC
GGCTCAATGCGCAAGGCCTGTGCGGTGATGTGGGTGCTGCCGAGCACTGC
CAGGGCCGCCACCAATATTGATTGCAGTATGGGAGTGGGAGTCAGCACTC
AACAGTGCTGGCTGCATCGTGCGAAAGACGGCTTGCCGATGCGGCCACGT
CCCGACGCTCGTGGTGCACATGACTATTAACCGTTCCATTGCTGCAGCGT
GCTCCGCAGGGCCGCCGCTGGTCATTGTACATCACGGCAGAAGCAGCAGC
GCACGGACGGACAATGAGCACCAAAACTTCACCCGCTGCGCGCACACCAG
CACTCACTGCGCGCTTGTCTGCATGCGGCGCAGGCGTCCTTCGTCTTTGC
GCTAGCAGCGCCGCAGCCGCAGCAGCAGTGCCAGCTCGGCGGCGGCGCCG
CCGCGCGCGCTGCGGTAAGACTGCAGAGCGACGGCAGCGGCGGCGCCGTG
GAAGGCGCGGCGACGGTTCGCGTGACATTTCTCAGCGGGCGCGCGGACGT
GGCGGGGGCGACGGTTGGGGCGGAGAGGGACGTGTTCAAAGGCGACGTCG
TGCGCATCATAGCGTCGCTGCTCGCGGTACGTAAGCATGGCAGCCCCCAG
AGAACATTTGCGTCGTCTGTGACGTGTACCTCAGCGGGCAACGCGTCGGC
TGCTTGTGATTTCTGTTGGTGCTTGCTGTGAGAGCGCTGCATGTGCGGAT
GGGATGCCAGGTGTGCGCCGCCGTGTGCGCCCAAGCGGCGCACGCGCCGC
TTAAGCCTCGCTGGCTACCCATTGGCGGCTGAGGCGGGCTCAGCTCACCA
TGAGACCTGCGATATGCAGTGCGTGCTGCTGTTCGAATCTTCTGCTGCCC
GTGCCAGTTCAACCGGCACGCCGCCTTGCTCGCCTTGCGCGCCCCTGCCG
GCAATGCTCCAATGCCGACAACCCACGCGTGACGCGTGCGCCCTTCCGCC
CCCTCCACGCGCAGGTGCCGCGCGCGCGCCTCTTCGTCGCGTCGGTCACC
GCGTACAGCGGCGGCGCGCTGATCGCGCTCGACATTTTGCCGCCGCTCAC
CGGCGCCGGCGCCGCCGCCGCGGAGGTCAACGCGGCGCTGCCCTCCGCCG
CCGTCGCCGCCGCGCTCGTCCAGGCGATCGCCAGCCCCGGCAGCGAGCTC
TACGGACACGCCGCGAGAGTGAAGCTGGCGGTGGACCCGGCGTACGAGCC
CCATGTGCGCGCATCGTCGGCGGCGGCAAGTGCAACCGACGGCCGGTCAC
GGGGGGGTCATGGCGCGCGCACCACGGCGATCGCGCTGTCGCTGCTGCTG
GCGGCGCTCGTGGGCGTCATGGCGGTGGCCTTTGTGAAGCGGCGCGACCT
GCTGTGGCGCGTGGCGGCGCGCAGCTTTCACCCGCTGCCCAGCGGCGGCG
GCGGCGGCGGCAATGAGGAGGACATCGGCGCGGGTGCGGACGAGTTTGAG
ATGACCGCCGCCGGCCGCGGCGGCAGCAGCGAGCTGGACTGGCGCAGTCT
GCGGTGA

Coding sequence (CDS) from alignment at Contig_129:339041..346347+

>mRNA_9878 ID=mRNA_9878|Name=jgi.p|Trimin1|352731|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2556bp|location=Sequence derived from alignment at Contig_129:339041..346347+ (Tribonema minus UTEX_B_3156 )
ATGGCTGGCAGCGGCGGTGTGGACAGCAGCAGCAATCCGTTTGGCAATGC
TTCCTTCATCACCTTTGAGATGATGACAACAAGAGACGATCTGCTTCTAG
AGTCCCTGACGCTTAATAACGCTCAGACGCCGGGCCTGATCTCCATCTCG
CACTGGGCGGAAGCCAACGCGGCGGCGGCGGCGGCGAAGCCCGGCAACTG
GCGCGACATCACAGCGCAGCTCTCGGATGCAGACTTTGTGCAGCCCGGCG
CGGTGGGTTGGTCCGGCCTCACATCTGCGCGCTTCGTCTTCAGCACTGCT
GCGGACGACAGGGACTCGACGGTGGCGTTCCGGCTGGCCAAGGTGTGCAA
GACCATGGCGGAGCCGAGCCTGTGCGTGGCGCGGCGGCAGTACGCGTACG
CGCTGCACGCGCACAAGTGCGACTGCGGCGTGTGCCACTCGTGCCACTGC
AAGGTGCAGGCCGTCTTCGACAAGGACGTCACGTGCGCGCACGGCGCCTG
CGACTCGTGCTGGTGCTCGCTGCTCGCCTCTTGCGGCTGCTGCTACGAGG
CCGAGTGCGCGTACGAGTGCGGCTGCCGCGCGTGCTTCGACACGAGCACG
GCGGAGGTCTGCGAGGCCGCGGTTCACTACGGCGCGGGCGCGGCGTCGCC
CGCGCGCGGCGCGCCCGCGGGCGGCCCTGTCGTCGCCGTCGCCGCCGCCC
CCGGCACCCAGTTCGCCGCCACCCAGGTCCTGTGCCGCTTCGGCGCCGCC
GCCGCCGCGCAGGGCTACTTCATTGCGCCGGATCGTGTGGCGTGCCTCGT
GCCGCCGCTGGCGGAGGCGGCGCCGGGCGCGGACGCTGCGCAGGGCAACA
TTACGGTGCCGGTCGCGGTGGCGCTGGGGGAGGGGGCGCCGGCGTGGGGG
GAGGGGGGCGCGGAGTTCACGTACGCGACGTGCCGCGGGGATGCGGACTG
CGGCGGCGGCGGCACGTGCGGCGCGGAGGATGGGGCGTGCGCGTGCGACG
CGATGCACACCGGGGACTTCTGCGAGTACACGTGCCCCACGGGGGCAGGC
CTTACTCAGCCGTGCAGCGGCTTTGGCGCATGCGACTTTGCGGCAGAATC
CGGCGGCGCCGTGTGCTACTGCGTCGAGGGGCACACCGGCGCGGGCTGCG
AGCAGGAGGACCTGGCGCCCGTTGCAGGCGGCGGCGGCAGCGGCGGCGGC
GGCAGCAGCGCCGGTACGGTGTGCGGAGCGGTGGCGAAGGACGGCGAGGC
TGTGTGCGGGGGGCACGGCGTGTGCAGCAGCGGCGGCGCGTGCGAGTGCG
CGGCGGGGTACTGGGGGGTGAAGTGCGAGAACCGCTGCAGTGACTGCTCG
CGCCACGGCCTGTGCCGCCCCGACACGGGCCACTGCGTGTGCTTCTCGGG
CTTCAGCGGCCCCAAGTGCGAGGTGCGCGCGTGCCCATTCGACTGCTACG
GCCACGGCACGTGCGACGACGGCGGCCTGTGCGTCTGCGCGCCGGGGTGG
AGTGGCCAGCCAACAATGTCATTCGTAGCAGTCAACGCCTCGTCGTACGC
GGCGATTGCGGGCGTTGGCGGCGCCCTTACAATCGCCGTGGTGCGCACAG
GCAGCCTGGCCGCCAACATATCCGTCTCCTATGCGACAATTGACGAGACG
GCTATGGCCGGCATCGACTATCGGGAGGCGCATGGGTCGCTAGCATGGCC
CGTCGGGGATGCTTCCCCGCGCTTTGTGGACATTACACTGCTGCCGCATC
CGCTGCCGGAAGTTGGGGAGGCGTCCTTCGTCTTTGCGCTAGCAGCGCCG
CAGCCGCAGCAGCAGTGCCAGCTCGGCGGCGGCGCCGCCGCGCGCGCTGC
GGTAAGACTGCAGAGCGACGGCAGCGGCGGCGCCGTGGAAGGCGCGGCGA
CGGTTCGCGTGACATTTCTCAGCGGGCGCGCGGACGTGGCGGGGGCGACG
GTTGGGGCGGAGAGGGACGTGTTCAAAGGCGACGTCGTGCGCATCATAGC
GTCGCTGCTCGCGGTGCCGCGCGCGCGCCTCTTCGTCGCGTCGGTCACCG
CGTACAGCGGCGGCGCGCTGATCGCGCTCGACATTTTGCCGCCGCTCACC
GGCGCCGGCGCCGCCGCCGCGGAGGTCAACGCGGCGCTGCCCTCCGCCGC
CGTCGCCGCCGCGCTCGTCCAGGCGATCGCCAGCCCCGGCAGCGAGCTCT
ACGGACACGCCGCGAGAGTGAAGCTGGCGGTGGACCCGGCGTACGAGCCC
CATGTGCGCGCATCGTCGGCGGCGGCAAGTGCAACCGACGGCCGGTCACG
GGGGGGTCATGGCGCGCGCACCACGGCGATCGCGCTGTCGCTGCTGCTGG
CGGCGCTCGTGGGCGTCATGGCGGTGGCCTTTGTGAAGCGGCGCGACCTG
CTGTGGCGCGTGGCGGCGCGCAGCTTTCACCCGCTGCCCAGCGGCGGCGG
CGGCGGCGGCAATGAGGAGGACATCGGCGCGGGTGCGGACGAGTTTGAGA
TGACCGCCGCCGGCCGCGGCGGCAGCAGCGAGCTGGACTGGCGCAGTCTG
CGGTGA