Trimin1|352731|estExt_Genemark1.C_Ctg_1290050 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352731
Unique NameTrimin1|352731|estExt_Genemark1.C_Ctg_1290050
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length852
Homology
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BLAST of jgi.p|Trimin1|352731 vs. uniprot
Match: A0A835ZA05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA05_9STRA)

HSP 1 Score: 1529 bits (3960), Expect = 0.000e+0
Identity = 851/851 (100.00%), Postives = 851/851 (100.00%), Query Frame = 0 
Query:    1 MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISISHWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTAADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHCKVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEXXXXXXXXXXXXXXXXXXEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAAAAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWGEGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAGLTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSXXXXXXAGTVCGAVAKDGEAVCGGHGVCSXXXACECAAGYWGVKCENRCSDCSRHGLCRPDTGHXXXXXXXXXXXXXVRACPFDCYGHGTCDDGGLCVCAPGWSGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDETAMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAPQPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGATVGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLTGAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEPHVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDLLWRVAARSFHPLPSGGXXXXXEEDIGAGADEFEMTAAGRGGSSELDWRSLR 851
            MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISISHWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTAADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHCKVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEXXXXXXXXXXXXXXXXXXEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAAAAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWGEGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAGLTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSXXXXXXAGTVCGAVAKDGEAVCGGHGVCSXXXACECAAGYWGVKCENRCSDCSRHGLCRPDTGHXXXXXXXXXXXXXVRACPFDCYGHGTCDDGGLCVCAPGWSGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDETAMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAPQPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGATVGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLTGAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEPHVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDLLWRVAARSFHPLPSGGXXXXXEEDIGAGADEFEMTAAGRGGSSELDWRSLR
Sbjct:    1 MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISISHWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTAADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHCKVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEXXXXXXXXXXXXXXXXXXEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAAAAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWGEGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAGLTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSXXXXXXAGTVCGAVAKDGEAVCGGHGVCSXXXACECAAGYWGVKCENRCSDCSRHGLCRPDTGHXXXXXXXXXXXXXVRACPFDCYGHGTCDDGGLCVCAPGWSGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDETAMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAPQPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGATVGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLTGAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEPHVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDLLWRVAARSFHPLPSGGXXXXXEEDIGAGADEFEMTAAGRGGSSELDWRSLR 851
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352731 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZA05_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 477..509
e-value: 21.0
score: 12.2
coord: 344..384
e-value: 43.0
score: 8.8
coord: 407..443
e-value: 15.0
score: 14.1
coord: 310..342
e-value: 85.0
score: 5.3
coord: 445..474
e-value: 12.0
score: 14.8
IPR000742EGF-like domainPROSITEPS00022EGF_1coord: 372..383
IPR000742EGF-like domainPROSITEPS00022EGF_1coord: 431..442
IPR000742EGF-like domainPROSITEPS00022EGF_1coord: 330..341
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 346..384
score: 9.16694
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 404..443
score: 9.336658
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 474..503
score: 9.188454
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 213..311
e-value: 2.1E-5
score: 26.5
IPR038081CalX-like domain superfamilyGENE3D2.60.40.2030coord: 506..624
e-value: 8.5E-11
score: 43.7
IPR038081CalX-like domain superfamilySUPERFAMILY141072CalX-likecoord: 508..601
NoneNo IPR availableGENE3D2.10.25.10Laminincoord: 416..505
e-value: 2.9E-12
score: 48.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..846
NoneNo IPR availablePANTHERPTHR24033:SF151TENASCIN-Xcoord: 125..512
NoneNo IPR availablePANTHERPTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINcoord: 125..512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_129contigContig_129:339041..346347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352731mRNA_9878Tribonema minus UTEX_B_3156 mRNAContig_129 339041..346347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352731|estExt_Genemark1.C_Ctg_1290050 ID=Trimin1|352731|estExt_Genemark1.C_Ctg_1290050|Name=jgi.p|Trimin1|352731|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=852bp
MAGSGGVDSSSNPFGNASFITFEMMTTRDDLLLESLTLNNAQTPGLISIS
HWAEANAAAAAAKPGNWRDITAQLSDADFVQPGAVGWSGLTSARFVFSTA
ADDRDSTVAFRLAKVCKTMAEPSLCVARRQYAYALHAHKCDCGVCHSCHC
KVQAVFDKDVTCAHGACDSCWCSLLASCGCCYEAECAYECGCRACFDTST
AEVCEAAVHYGAGAASPARGAPAGGPVVAVAAAPGTQFAATQVLCRFGAA
AAAQGYFIAPDRVACLVPPLAEAAPGADAAQGNITVPVAVALGEGAPAWG
EGGAEFTYATCRGDADCGGGGTCGAEDGACACDAMHTGDFCEYTCPTGAG
LTQPCSGFGACDFAAESGGAVCYCVEGHTGAGCEQEDLAPVAGGGGSGGG
GSSAGTVCGAVAKDGEAVCGGHGVCSSGGACECAAGYWGVKCENRCSDCS
RHGLCRPDTGHCVCFSGFSGPKCEVRACPFDCYGHGTCDDGGLCVCAPGW
SGQPTMSFVAVNASSYAAIAGVGGALTIAVVRTGSLAANISVSYATIDET
AMAGIDYREAHGSLAWPVGDASPRFVDITLLPHPLPEVGEASFVFALAAP
QPQQQCQLGGGAAARAAVRLQSDGSGGAVEGAATVRVTFLSGRADVAGAT
VGAERDVFKGDVVRIIASLLAVPRARLFVASVTAYSGGALIALDILPPLT
GAGAAAAEVNAALPSAAVAAALVQAIASPGSELYGHAARVKLAVDPAYEP
HVRASSAAASATDGRSRGGHGARTTAIALSLLLAALVGVMAVAFVKRRDL
LWRVAARSFHPLPSGGGGGGNEEDIGAGADEFEMTAAGRGGSSELDWRSL
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013783Ig-like_fold
IPR038081CalX-like_sf