mRNA_9845 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352715
Unique NamemRNA_9845
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A835ZCF7_9STRA (GrpE protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF7_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 5.990e-163
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 3
Query:   63 MAPTCSQRLGCAALLLALLAAGVQSFVSSTARLQTGRQSQQAVSRTQQQRHTIYAAADGGKDVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG 788
            MAPTCSQRLGCAALLLALLAAGVQSFVSSTARLQTGRQSQQAVSRTQQQRHTIYAAADGGKDVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG
Sbjct:    1 MAPTCSQRLGCAALLLALLAAGVQSFVSSTARLQTGRQSQQAVSRTQQQRHTIYAAADGGKDVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG 242          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: H6WB81_VAULI (GrpE protein homolog n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB81_VAULI)

HSP 1 Score: 239 bits (610), Expect = 4.280e-75
Identity = 125/179 (69.83%), Postives = 142/179 (79.33%), Query Frame = 3
Query:  252 DDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG 788
            DDLL++P FLTKK+EVL KQ+AK EEEI+AAN EADKEWEEWGPQI+RLE EF  ++ RMLNDTMEA   AKVK LK IL V+DNF RASQAI   T+GE AVV YYK +Y  M  VF  LGM+P+ TVG PFDYNLHEAVMRQ S+E +ED+V  E TKGF VG  LIRPAMVAVS+G
Sbjct:   68 DDLLQTPQFLTKKIEVLNKQIAKKEEEISAANLEADKEWEEWGPQIERLEREFENVRARMLNDTMEASTSAKVKVLKEILAVSDNFMRASQAISPSTEGEIAVVDYYKSIYEEMQAVFVALGMKPIATVGEPFDYNLHEAVMRQ-SSEFDEDIVCLELTKGFMVGKELIRPAMVAVSTG 245          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A7S2V1T8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1T8_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.180e-57
Identity = 97/180 (53.89%), Postives = 129/180 (71.67%), Query Frame = 3
Query:  249 VDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG 788
            VDDLL +PAFL KK+E L K + K +E+I  A+AEA KEWEEWGPQI R + E+  L+ RM+N TMEA   AKVK LK +L   DNF+RA  A K Q++ E+A +  Y  +++ ++ VF +LGM+ +PTVG PFD+NLH AVM+QPS E+ ED +  E+ KG+ V G +IRPAMV VS+G
Sbjct:  118 VDDLLNTPAFLQKKIEALNKSMVKVQEQIDEADAEAAKEWEEWGPQISRAKREYQALRARMVNATMEASTTAKVKCLKEVLQAYDNFQRAQAAFKPQSEDEQAALDQYTKMFDDLNEVFTKLGMKEIPTVGEPFDFNLHSAVMQQPSDEYPEDTICLEYAKGYMVDGEMIRPAMVVVSAG 297          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: D8LBD7_ECTSI (GrpE protein homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD7_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.900e-54
Identity = 97/179 (54.19%), Postives = 128/179 (71.51%), Query Frame = 3
Query:  246 DVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVS 782
            +VDDLL S AFL KKVE+L+KQ+  T+ +I  A A+AD++W EWGPQ+QRLE EF+ LK R      +A N+ K +A+  IL V DNFERA+ AI A+TDGE+AVVAYYK  Y+ M    + L +  V T+G PFDYN+H A+MR+ + E  ED+V + F KG+ VG TL+RPAMVAV+
Sbjct:  100 EVDDLLNSDAFLNKKVEMLQKQINATQADIVTAQAQADEQWAEWGPQVQRLEKEFSALKGRGGEARTQAYNKGKAEAINNILGVADNFERAAGAISAETDGERAVVAYYKDTYDNMMKCLEGLDLVEVDTIGAPFDYNIHNAIMRENTDEFPEDVVCKVFQKGYQVGDTLVRPAMVAVA 278          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A448ZSA7_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSA7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.020e-51
Identity = 91/177 (51.41%), Postives = 124/177 (70.06%), Query Frame = 3
Query:  252 DDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVS 782
            DD+L SPAFL +KVEVL+  +AKTEE++ AA    +   EEWGPQ++ LE E+T ++QRM     E  ++AKV+ +K IL + DNF+RAS  I A+T+ ++A+ A YK  Y  +   FKE+G+  V TVG  FDY LH+AVM+ P +E+EE  V QEF KGF +G +LIRPAMVAV+
Sbjct:   71 DDILSSPAFLKRKVEVLESDIAKTEEDLVAATERKEIAKEEWGPQLEALEREYTNIQQRMTEQNQEGDSDAKVRVVKGILDLLDNFDRASGVIVAETEADQAIEAAYKQAYQDILDKFKEMGVTEVETVGTEFDYELHQAVMQMPGSEYEEGFVCQEFQKGFIMGESLIRPAMVAVA 247          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A7S0UHW3_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UHW3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.090e-47
Identity = 87/185 (47.03%), Postives = 122/185 (65.95%), Query Frame = 3
Query:  228 AADGGKDVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVS 782
            + D   D +D+L SPAFL +K+EVL+  +A  +E++AAA    +   EEWGPQ++ L+ E+  ++QRM     E  ++AKV+ +K +L + DNF+RAS  I A+TD EK + A YK  Y  +   FK++G+  V TVG  FDY LH+AVM+ P  E+EE  V QEF KGF +G  LIRPAMVAV+
Sbjct:   99 SGDASADSNDILNSPAFLKRKLEVLESDIATADEDLAAATERKEVAKEEWGPQLEALQREYQNIQQRMTEQNQEGDSDAKVRVVKGVLDLLDNFDRASGVIVAETDEEKQIEAEYKQAYQDILDQFKKMGVMEVETVGSEFDYELHQAVMQMPGTEYEEGYVCQEFQKGFIMGEALIRPAMVAVA 283          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A7S4AM71_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AM71_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.860e-46
Identity = 86/179 (48.04%), Postives = 121/179 (67.60%), Query Frame = 3
Query:  246 DVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVS 782
            DV+D+L SPAFL +K+EVL+  +A TEEE+ AA    +   EEWGPQI+ L+ E+T ++QRM        ++AKV+ +K IL + DNF+RAS  I A+T+ E+ + A YK  Y  +   F E+G+  V T+G  FDY LH+AVM+ P  E+EE +V +EF KGF +  +LIRPAMVAV+
Sbjct:   69 DVNDILSSPAFLKRKLEVLESDIATTEEELVAATERKEIAKEEWGPQIEALQREYTNIQQRMTEQNQVGDSDAKVRVVKGILDLLDNFDRASGVIVAETEVEQTIEAGYKQAYQDILDQFAEMGVTEVETLGTEFDYELHQAVMQMPGTEYEEGVVCKEFQKGFIMDESLIRPAMVAVA 247          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A1Z5KT30_FISSO (GrpE protein homolog n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KT30_FISSO)

HSP 1 Score: 154 bits (389), Expect = 2.590e-42
Identity = 80/177 (45.20%), Postives = 116/177 (65.54%), Query Frame = 3
Query:  252 DDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVS 782
            +D+L SPAFL +K EVL+  L K E+ +AAA    ++   EWGPQ+  L+TE+  +++RM   +    + A V+  + +L V DNF+RA  A++   D E A+ A YKG Y  M   F E+G+E +PTVG  FDY +H+AVM++PS E+EE +V +EF KGF  G +L+R AMVAV+
Sbjct:   35 NDILNSPAFLQRKFEVLQTDLQKAEDALAAAQQRLEEGKAEWGPQLADLQTEYQNIQKRMNEQSKGGDSMATVQVARNMLNVLDNFDRAFGAVQPSNDEELAIEAEYKGTYQMMLDAFAEMGVEEIPTVGVEFDYQVHQAVMQKPSDEYEEGIVCEEFQKGFKCGDSLVRAAMVAVA 211          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A7S3L4W1_9STRA (GrpE protein homolog n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4W1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.870e-40
Identity = 79/177 (44.63%), Postives = 116/177 (65.54%), Query Frame = 3
Query:  255 DLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSS 785
            D+L SPAFL +K++VLK  +AK EE IAAA    D+   EW  Q+  L+ E+  ++ R+ +   + G+ A V+  +  L V DNF+RA   I A+TD +K +   Y+  YN + T+  +LG+E V TVG  FDY +H+AVM++PS E+EE +V +EF KGF +G TLIR AMV+V++
Sbjct:   66 DILNSPAFLKRKIDVLKSDIAKAEEGIAAAKQRLDEGKAEWEGQLDELQKEYQNIQARLGDQQKKGGSMAIVQVAREALKVLDNFDRAFGVITAETDSQKKIEEEYRTTYNEILTILADLGVEEVQTVGTEFDYEIHQAVMQKPSDEYEEGIVVEEFQKGFKLGDTLIRAAMVSVAA 242          
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Match: A0A7S1UFZ6_9STRA (GrpE protein homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 6.190e-40
Identity = 82/184 (44.57%), Postives = 112/184 (60.87%), Query Frame = 3
Query:  240 GKD-VDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG 788
            GKD VDD+L +P FL +K+EVL+++  + +E++    A+     ++W  +I RL  EF  L++R   +  EA   AKV+ LK +LTV DNF RA   +   +    AVV  Y  VY+ +  VF+ELGM  + TVG PFD N  EAVM+QPS E EE  V QE+  GF VG   +RPA V VS+G
Sbjct:   78 GKDKVDDILNTPIFLKRKLEVLEREAGELKEQLDTVKAQTADGEDDWQEKIDRLNKEFEMLRERARGEMGEASTNAKVEVLKEVLTVTDNFVRAKATVDTSSPSAGAVVERYDAVYDNIQAVFEELGMTSITTVGEPFDPNFMEAVMQQPSDEFEEGSVLQEYQAGFVVGDKTVRPAFVVVSAG 261          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352715 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCF7_9STRA5.990e-163100.00GrpE protein homolog n=1 Tax=Tribonema minus TaxID... [more]
H6WB81_VAULI4.280e-7569.83GrpE protein homolog n=1 Tax=Vaucheria litorea Tax... [more]
A0A7S2V1T8_9STRA1.180e-5753.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LBD7_ECTSI1.900e-5454.19GrpE protein homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A448ZSA7_9STRA4.020e-5151.41GrpE protein homolog n=1 Tax=Pseudo-nitzschia mult... [more]
A0A7S0UHW3_9STRA1.090e-4747.03GrpE protein homolog n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S4AM71_9STRA4.860e-4648.04GrpE protein homolog n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5KT30_FISSO2.590e-4245.20GrpE protein homolog n=1 Tax=Fistulifera solaris T... [more]
A0A7S3L4W1_9STRA1.870e-4044.63GrpE protein homolog n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1UFZ6_9STRA6.190e-4044.57GrpE protein homolog n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_129contigContig_129:217201..220196 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352715|estExt_Genemark1.C_Ctg_1290026
BRITEko00000,ko03029,ko03110
KEGG koko:K03687
DescriptionGrpE
COG categoryO
Max annot lvl2836|Bacillariophyta
EggNOG OGsCOG0576@1|root,KOG3003@2759|Eukaryota,2XD1Y@2836|Bacillariophyta
Evalue4.6e-35
Seed ortholog159749.K0RMY4
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionMitochondrial matrix cochaperone
Ec32 orthologEc-27_004320.1
TranscriptId353037
TrackFilteredModels1
ProteinId352715
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352715gene_9845Tribonema minus UTEX_B_3156 geneContig_129 217201..220196 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352715Trimin1|352715|estExt_Genemark1.C_Ctg_1290026Tribonema minus UTEX_B_3156 polypeptideContig_129 217338..220033 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9845_5exon_9845_5Tribonema minus UTEX_B_3156 exonContig_129 217201..217604 -
exon_9845_4exon_9845_4Tribonema minus UTEX_B_3156 exonContig_129 217965..218021 -
exon_9845_3exon_9845_3Tribonema minus UTEX_B_3156 exonContig_129 218940..219044 -
exon_9845_2exon_9845_2Tribonema minus UTEX_B_3156 exonContig_129 219734..220037 -
exon_9845_1exon_9845_1Tribonema minus UTEX_B_3156 exonContig_129 220139..220196 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_9845UTR3_9845Tribonema minus UTEX_B_3156 three_prime_UTRContig_129 217201..217337 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9845CDS_9845Tribonema minus UTEX_B_3156 CDSContig_129 219734..220033 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_9845UTR5_9845Tribonema minus UTEX_B_3156 five_prime_UTRContig_129 220139..220196 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9845 ID=mRNA_9845|Name=jgi.p|Trimin1|352715|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=928bp|location=Sequence derived from alignment at Contig_129:217201..220196- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCTGGCTGCCTAGGACCCGTGCGCCACCGTTGCTGCGAGAATTCTCTCAC
CAGCTAAGGACCATGGCGCCAACCTGCTCTCAGAGGCTGGGATGCGCTGC
GTTGCTGCTGGCGCTGCTAGCGGCGGGAGTGCAGTCATTCGTGAGCAGTA
CTGCTCGTCTGCAGACCGGCCGGCAATCACAGCAGGCAGTCTCTCGAACA
CAACAGCAGCGGCACACAATTTACGCTGCTGCGGATGGCGGCAAGGACGT
GGATGATCTCTTGGAGAGCCCCGCTTTCTTGACAAAGAAGGTTGAGGTGC
TGAAAAAGCAGCTTGCCAAGACGGAAGAGGAAATAGCTGCGGCCAATGCG
GAGGCAGACAAGGAATGGGAGGAGTGGGGGCCACAAATCCAGAGGTTGGA
AACAGAGTTCACGTTCCTGAAGCAAAGGATGCTCAATGACACCATGGAGG
CAGGAAACGAAGCCAAGGTCAAGGCGCTGAAGGCAATCCTCACCGTCAAC
GACAATTTTGAAAGGGCCAGTCAGGCGATCAAGGCGCAGACAGACGGCGA
GAAGGCCGTCGTCGCGTACTACAAGGGCGTGTACAACGCCATGCACACCG
TCTTCAAGGAGCTCGGCATGGAGCCCGTGCCGACGGTCGGCCACCCCTTT
GACTACAACCTGCACGAGGCCGTGATGCGCCAGCCCAGCGCGGAGCACGA
GGAGGACCTGGTGTCGCAGGAGTTCACCAAGGGGTTCACGGTGGGGGGGA
CGCTCATACGGCCGGCGATGGTTGCGGTCAGCTCTGGGTAGTGGCGCTGC
AGCGCGCAAGGGGGGGGGAGGGGGGGGGGCTTTGCGGAGGGAGCGCGCGC
AAAGTCGTCGCGGCCGGCAGCGTAGGCGGTCTGAGCAACACACAACACAT
TGGTAATGCAAGCATTTTGTTTATGGCA
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protein sequence of jgi.p|Trimin1|352715

>Trimin1|352715|estExt_Genemark1.C_Ctg_1290026 ID=Trimin1|352715|estExt_Genemark1.C_Ctg_1290026|Name=jgi.p|Trimin1|352715|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=243bp
MAPTCSQRLGCAALLLALLAAGVQSFVSSTARLQTGRQSQQAVSRTQQQR
HTIYAAADGGKDVDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADK
EWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFE
RASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNL
HEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSSG*
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mRNA from alignment at Contig_129:217201..220196-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9845 ID=mRNA_9845|Name=jgi.p|Trimin1|352715|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2996bp|location=Sequence derived from alignment at Contig_129:217201..220196- (Tribonema minus UTEX_B_3156 )
CCTGGCTGCCTAGGACCCGTGCGCCACCGTTGCTGCGAGAATTCTCTCAC CAGCTAAGGTAAGCCTGATGGATCACGAAGCCTGCAAACGATCCCCACTG TCGCCGGTATGTTGATGCATGTCCTCATCCCACAAGTTGAACTGTGCATG ACCGCGCAGGACCATGGCGCCAACCTGCTCTCAGAGGCTGGGATGCGCTG CGTTGCTGCTGGCGCTGCTAGCGGCGGGAGTGCAGTCATTCGTGAGCAGT ACTGCTCGTCTGCAGACCGGCCGGCAATCACAGCAGGCAGTCTCTCGAAC ACAACAGCAGCGGCACACAATTTACGCTGCTGCGGATGGCGGCAAGGACG TGGATGATCTCTTGGAGAGCCCCGCTTTCTTGACAAAGAAGGTTGAGGTG CTGAAAAAGCAGCTTGCCAAGACGGAAGAGGAAATAGCTGCGGCCAATGC GGAGGCAGACAAGGTGAGCACTTTGTTCTGTGGCATGACGAAACTGCAGC TACGCCTCATTTTGCTGAGGGTAGGGCAATGTCTCCGTGGTGAAAATAAG TCGTCGTTTGTAATATATAGCCCAAAGCTCCAGCATTGACAAAACTAATC TAGTGAGTCGCATTCGTAATTTGCTTGATCGTACATTTCTGGAAGCTTTG CACTGGAGGAGGGTGGCTGGGCTTAACTTGGCTGCAACCTCTGTGACATC CGGTAATTTCGTGAGTCAGTTCTTTCATTGAAGCCAGCTTATAGAAATTC ACTCCTTTGATTGTAAGAGCTACGTCATCTCTTTTGGACATGATGTCCTT GTCAATTACGCCAGGCCCGTTCCTCTGACTTGCCCTGATGTGCATGCACC TGCAATGCATCATATTTCTTGTCGAACCACCCTGACTGGATCCTGCTGCA AAGGTGGCTAGATCGCTGATCATGTTTTTGTGCGCCAGTTGTGTCGATGA CCTCGTGAATGACTTCGTGATGGCCAGGGCAGCGAAGCTGCTCCACAGTC TTGACACTAGCACATCGCACGCTTTGCTGTTGAGATGACCCTCAACAAGC TGTGAAAAATACGTTTTTCTTGCTGCTCCTACTGACGCTGACGCTGACGC TGCTGTCACTACTGCTCTGTGCTGTGGCCCATGCGGTTTGGTATGAGCTC AGGAATGGGAGGAGTGGGGGCCACAAATCCAGAGGTTGGAAACAGAGTTC ACGTTCCTGAAGCAAAGGATGCTCAATGACACCATGGAGGCAGGAAACGA AGCCAAGGTGATGAAAACATCAGGTTCAGCGCGACTTGCCTTGTTTGTCA TGCACACCACAGAGCTAGTCATAGCAGCACAAGTTCAAAGGGTATCGGAA GTACTGTCAATGTTGACGTGTCCAAAGCCTCTGATGAAGGTTACCTGGCT CCTCATCATGTACCATTGTCAAAGCATCGAACGAGAGCGGCAGCGGCAGG CATGTACTGGTGTGCAGCATTTGTTTCGCACAAGCTCTGCACGTGCTTGC AGCGGCGTGTCTGGGGCTTGAGGTGCGCATCCGGAATCGCTGATGTGCAG AAGATCAGTACATAGAGTGTCCGCCCCTCAAGCGGGAGTAAATCAAGTAC ATCGCGCCCTGAGCGAGAATCGATAAAAAGTGCATGGATTCAGTCATGCC ATGGACATGAGTGGAGCATCGTTCTGGCACACAATGGCTTGCACACAGGT GGTACAACTGTTGTGGTGCAGTTTGCAGTTGATAGCAGTGCCCAACTTTT CCTTGCAGCAGCAGTCATGCCTTAGCACGGGGCAGATTGTCGACATTGCA GCTTGCAGCTGTAGGGCATCTTGAAGTGCAGGTGCACAGCCTTCATTGTT GCTCCAGTGCACTGCTGTAATCACTGCTGTAAGCACTGCTCCTGATGAGC ACACGATGCACTTGGTCATGATTTAGGTTTGGAGTTGAGGTTGACGTTTG AAACCTTGTGGACAGTCTGCACGAGATACACTGTGCCTTCACTTCATTGC ACTGTATGTAGGACGTTCGCTCCTTCAGCTCTATATGCATCAGTGTCGCG GCACCGCAACACTTGCTTGCGGTCACACACGACTCGCATAGGCAGTCTAG TCTAGGTCAGTTTGCATGTGGCAAAGTGCTCACCTGTCTTTGTTGCCTGC TGCCCGTGCGCTGTGGCCTGCTCAGGTCAAGGCGCTGAAGGCAATCCTCA CCGTCAACGACAATTTTGAAAGGGCCAGTCAGGTGAGCCTTGCCTTCTGG ATCAGGCAGCGTGTTCACTGCTGCTGCGTGCGGCGGAATCGCAGCCTACG GGCATGCTGTTGCGCCAAACGGCTTGTGTGTATGCAGTTGATGCTTGATT TGTGTTCAATGGCTGGAGCACATGCGAGTACATCAAATTCATGTGCGCTG CTTGCAGGCAGTCATGAACGCTGGCGTTGCACACTGGTGCTGAGAATGTG CAGAGCCTTTTGCAGCCACCTTGTGCCACATGATCAGCGTTCTTGCAGCA TCACAGTACCCCGCGCAACCACGGCCACGACGTGCAGCGCTTGCCCTGAT CTCACGCGCACACCCGCACCGCTGCGCATGCGCGCTGCGCAGGCGATCAA GGCGCAGACAGACGGCGAGAAGGCCGTCGTCGCGTACTACAAGGGCGTGT ACAACGCCATGCACACCGTCTTCAAGGAGCTCGGCATGGAGCCCGTGCCG ACGGTCGGCCACCCCTTTGACTACAACCTGCACGAGGCCGTGATGCGCCA GCCCAGCGCGGAGCACGAGGAGGACCTGGTGTCGCAGGAGTTCACCAAGG GGTTCACGGTGGGGGGGACGCTCATACGGCCGGCGATGGTTGCGGTCAGC TCTGGGTAGTGGCGCTGCAGCGCGCAAGGGGGGGGGAGGGGGGGGGGCTT TGCGGAGGGAGCGCGCGCAAAGTCGTCGCGGCCGGCAGCGTAGGCGGTCT GAGCAACACACAACACATTGGTAATGCAAGCATTTTGTTTATGGCA
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Coding sequence (CDS) from alignment at Contig_129:217201..220196-

>mRNA_9845 ID=mRNA_9845|Name=jgi.p|Trimin1|352715|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=729bp|location=Sequence derived from alignment at Contig_129:217201..220196- (Tribonema minus UTEX_B_3156 )
ATGGCGCCAACCTGCTCTCAGAGGCTGGGATGCGCTGCGTTGCTGCTGGC
GCTGCTAGCGGCGGGAGTGCAGTCATTCGTGAGCAGTACTGCTCGTCTGC
AGACCGGCCGGCAATCACAGCAGGCAGTCTCTCGAACACAACAGCAGCGG
CACACAATTTACGCTGCTGCGGATGGCGGCAAGGACGTGGATGATCTCTT
GGAGAGCCCCGCTTTCTTGACAAAGAAGGTTGAGGTGCTGAAAAAGCAGC
TTGCCAAGACGGAAGAGGAAATAGCTGCGGCCAATGCGGAGGCAGACAAG
GAATGGGAGGAGTGGGGGCCACAAATCCAGAGGTTGGAAACAGAGTTCAC
GTTCCTGAAGCAAAGGATGCTCAATGACACCATGGAGGCAGGAAACGAAG
CCAAGGTCAAGGCGCTGAAGGCAATCCTCACCGTCAACGACAATTTTGAA
AGGGCCAGTCAGGCGATCAAGGCGCAGACAGACGGCGAGAAGGCCGTCGT
CGCGTACTACAAGGGCGTGTACAACGCCATGCACACCGTCTTCAAGGAGC
TCGGCATGGAGCCCGTGCCGACGGTCGGCCACCCCTTTGACTACAACCTG
CACGAGGCCGTGATGCGCCAGCCCAGCGCGGAGCACGAGGAGGACCTGGT
GTCGCAGGAGTTCACCAAGGGGTTCACGGTGGGGGGGACGCTCATACGGC
CGGCGATGGTTGCGGTCAGCTCTGGGTAG
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