mRNA_9763 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A836C9G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G9_9STRA) HSP 1 Score: 514 bits (1325), Expect = 1.750e-181 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 2 Query: 92 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS 1069 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS Sbjct: 1 MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVLGSWGSPSGGGAXXXXXXXXDDAAAVEVEVVEGGDAQEESSSGSDDALQEEQVEFVVPVVEVTAEAVDAAMSTPAQQLDNAS 326
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 6.120e-17 Identity = 83/274 (30.29%), Postives = 120/274 (43.80%), Query Frame = 2 Query: 95 GFMRWLRGFYNALFWYGAAFDD-DDSLPAMDFKDLMEQYETE-GDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDR--------------DRAPKRTST-------------QPDRRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADA-AELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARVL 826 G W R FYN LFWYG A + +D LPAM+F+DL+E+++ G++ AR R P+ VPP + + D FRW P G RA R ST + +R LRR+ R L + DL KV +RL V+D T+ELW+RR + +R GG++ +++ AKRR+Y L+++GR L++A VEL GRLE+ A L R++ Sbjct: 216 GLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPR------PI---------------VPPEDLAAEQD--FRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGRGRREGGDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSR----GGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIV 462
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A6V1WCN8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WCN8_HETAK) HSP 1 Score: 56.2 bits (134), Expect = 2.480e-6 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 536 LRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAARRRPPGGADAAELVSAKRRVYKLRDDGRALEAARVELAGRLENASANLARV 823 LR +A L R L ++A+VD+RL VLD +LE+W RR A+ R PG A E+ A+ RV +L+ G LE +L ++ NA+ANL R+ Sbjct: 14 LRAKAGRLARARETLAAEIAQVDDRLRVLDVSLEMWYRRLNAMRRRGLGPG---APEVREARARVEELKALGAVLEREAGDLERQVANAAANLRRI 106
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A835YU23_9STRA (Meiotic nuclear division protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU23_9STRA) HSP 1 Score: 394 bits (1011), Expect = 1.510e-134 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 Query: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV Sbjct: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 244
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: F5BX17_UNDPI (Meiotic nuclear division protein 1 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=F5BX17_UNDPI) HSP 1 Score: 167 bits (423), Expect = 1.710e-46 Identity = 98/244 (40.16%), Postives = 139/244 (56.97%), Query Frame = 1 Query: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 MV+K LS++EK+ ++L+I+H TK + +LKE+EK A + G+V+ T+KDVN LV+DG+VD DKIG SNFFW+FPSKAV+ N I SLK I + KRK L R D +ER+ KL+RL + ++R L ++ E LK NDP ELE+V E ++ N WTDN W+IK++MVK +G++G +VD+ L +K DFD+V Sbjct: 1 MVKKGLSLEEKRAKILNIYHGTKSIFSLKEIEKAASKQGVVSQTIKDVNQSLVDDGLVDMDKIGPSNFFWSFPSKAVVDRQNLIDSLKRDIAKAEDTAAVNKRKIASLVEERA-------------DTEERQLKLRRLQDNKQRVKQLESEYETLKE-----------------------------NDPAELEKVTNVAEVCKDGVNRWTDNTWSIKSWMVKTRGMSGADVDKYLQIKADFDHV 202
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: D8LRU4_ECTSI (MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU4_ECTSI) HSP 1 Score: 165 bits (418), Expect = 9.390e-46 Identity = 99/244 (40.57%), Postives = 135/244 (55.33%), Query Frame = 1 Query: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 MV++ LSV+EK++++L I+H+TK + +LKE+EK A + G+ NTVKDVN LV+DG+VD DKIGASNFFW+FPSK +T N + +L++ I + KRK EL R D + RR KL RL E R L + E LK NDP ELE+V + ++ N WTDN W IK++MVK +G++GK+VDR L +K DFD V Sbjct: 1 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTAANKRKFSELEEGRADTAS-------------RREKLGRLQENGLRLQELEKEYESLKE-----------------------------NDPAELEKVARLTQVCKDGVNRWTDNSWCIKSWMVKTKGMSGKDVDRYLQIKGDFDLV 202
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A7S2XYC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC3_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.500e-44 Identity = 94/242 (38.84%), Postives = 139/242 (57.44%), Query Frame = 1 Query: 7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 RK LS++EK++R+L I+H++ EV NLKE+EK A +AG+V T+KDVN L++D +VD+DKIG++NFFW+FPSK + I SL++QIE + L A+ K +L A D + RR L +L +ER+R + L + LK NDP+EL R++ E +E N WTDN+WA+K++ VKK+G+ K+VDR + L +DFDY+ Sbjct: 5 RKGLSLEEKRQRILGIYHSSGEVYNLKEIEKIASKAGVVLQTIKDVNQSLIDDHLVDADKIGSANFFWSFPSKVYVVKKTKIESLQKQIEDSKRQLNAAQDKVADLENA------------GRQDSNTRREGLAKLDQERKRGSELDERLQCLKE-----------------------------NDPEELLRLKNLQEEIKEHVNRWTDNIWAVKSWCVKKKGMPSKDVDRYMQLPQDFDYI 205
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: H3HEE5_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3HEE5_PHYRM) HSP 1 Score: 160 bits (405), Expect = 8.120e-44 Identity = 93/244 (38.11%), Postives = 140/244 (57.38%), Query Frame = 1 Query: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 M RK +S+ EK+ER+L I+H +KEV NLKE+EK +AG+V TVKDVN LV+D +VD DKIG+ N+FW+FPSK T ++ L+++ +T L K+ E+ G R + +ER KL+RL E++ + LR + L NDP+ LE++ +V A+E ++ WTDN++ +K+++VKK+G+ GKEVD+ LG+K+DFDYV Sbjct: 1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDVLVDCDKIGSGNYFWSFPSKLSQTRRRKLSELEQRHQTAQDKLVKVKQNVEKQKGLRP-------------ESEERVQKLRRLEEQKAKVQVLRTKVQHL-----------------------------AENDPEILEQLERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 202
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A7S3XLC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC7_HETAK) HSP 1 Score: 151 bits (382), Expect = 9.270e-41 Identity = 94/242 (38.84%), Postives = 127/242 (52.48%), Query Frame = 1 Query: 7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 RK +S +EK+ R+L I+H KEVLNLKELEK + G+V ++K+VN LV+D +VD+DKIG++NFFW+FPSK +A L LG R D +RRA+LQ+L +E+ REAAL + LK NDP+EL R+ E E +E AN WTDN+WA+K++ +KK+G+ EVDR L L DFDYV Sbjct: 5 RKGVSYEEKRTRILGIYHEKKEVLNLKELEKLGVKQGVVVQSIKEVNQALVDDNLVDTDKIGSANFFWSFPSK--------VAEL--------------------LGAGR-------------HDTPQRRAQLQKLQDEKAREAALDQRLDTLKE-----------------------------NDPRELARIETETEKCKEAANRWTDNIWALKSWCIKKKGMASTEVDRYLQLSSDFDYV 176
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A0W8B6R8_PHYNI (Dephospho-CoA kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8B6R8_PHYNI) HSP 1 Score: 160 bits (404), Expect = 1.070e-40 Identity = 95/253 (37.55%), Postives = 140/253 (55.34%), Query Frame = 1 Query: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSL---------GXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 M RK +S+ EK+ER+L I+H +KEV NLKE+EK +AG+V TVKDVN LV+D +VD DKIG+ N+FW+FPSK + ++ L+++ T +L ++ EE R D G + DER KL+RL E++ + ALR + L NDP LE + +V A+E ++ WTDN++ +K+++VKK+G+ GKEVD+ LG+K+DFDYV Sbjct: 272 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQRRHTAQENLAKVQQNIEEQKSLRSDSVRTNISRGNFGGVLMEWIICEQDERVQKLRRLEEQKAKVNALRTKVQHL-----------------------------AENDPAILEELERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 495
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A0P1AFA8_PLAHL (Protein involved in meiotic recombination/predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFA8_PLAHL) HSP 1 Score: 150 bits (378), Expect = 7.800e-40 Identity = 92/244 (37.70%), Postives = 135/244 (55.33%), Query Frame = 1 Query: 1 MVRKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 M RK +S+ EK+ER+L I+H +KEV NLKE+EK +AG+V TVKDVN LV+D +VD DKIG+ N+FW+FPSK + ++ L++ + L+ K K EE R D DER KL+RL E + + +LR + L NDP LE + +V A+E A+ WTDN++ +K+++VKK+G+ GKEV++ L +++DFDYV Sbjct: 1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQCRQARQEKLDRVKEKIEEQQALRS-------------DSDERIQKLKRLEELKVKVESLRNTMQHL-----------------------------AENDPAILEDLECKVGIAKEGADRWTDNVFTLKSWVVKKRGVEGKEVNKWLEIQDDFDYV 202
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A8K1FKH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH2_PYTOL) HSP 1 Score: 145 bits (366), Expect = 4.790e-38 Identity = 82/242 (33.88%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 +K +S++EK+ER+L I+H +K+V N+KE+EK +AG+V T+KDVN LV+D +VD DKIG+ N+FW+FPSK ++ L+++ ++T L K++ E+ R D D+R AKLQRLAE + ++A + L NDP LE + ++ A+ A+ WTDN++ +++++ +K+G + EVD+ LG+K+DFDY+ Sbjct: 5 KKGVSLEEKRERILKIYHESKDVYNIKEIEKLGAKAGVVLQTIKDVNQALVDDALVDFDKIGSGNYFWSFPSKVSQQRKRKLSELEQRKQSTSEQLSKVKQEVEKQKSLRT-------------DSDDRVAKLQRLAELQTHVKDMKAKIQHL-----------------------------ADNDPAILEHLERNMQVAKVGADRWTDNVYTVRSWVAQKRGCSTGEVDKWLGIKDDFDYI 204
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Match: A0A5D6Y0R0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0R0_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.910e-36 Identity = 83/242 (34.30%), Postives = 130/242 (53.72%), Query Frame = 1 Query: 7 RKALSVDEKKERLLSIFHTTKEVLNLKELEKHAGRAGIVTNTVKDVNAELVNDGIVDSDKIGASNFFWAFPSKAVLTHVNNIASLKEQIETTHASLEDAKRKGEELGGARVDPSLGXXXXXXXXDCDERRAKLQRLAEEREREAALRADAEQLKXXXXXXXXXXXXQLRERXXXXXXXXXXXXXNDPKELERVRAEVEGARERANLWTDNLWAIKAFMVKKQGLTGKEVDRMLGLKEDFDYV 732 RK +S++EK+ R+L I+H +K+V NLKE+EK +AG+V T+KDVN LV+DG+VD DKIG+ N+FW+FPSK + L+++ L ++ +E R + D+R AKLQRLAE L+A + LK NDP+ L ++ V+ A+ A+ WTDN++ +++++ +K+G EVD+ LG+K+DFDY+ Sbjct: 4 RKGVSLEEKRARILHIYHDSKDVFNLKEVEKIGAKAGVVLQTIKDVNQALVDDGLVDCDKIGSGNYFWSFPSKLSQARKRKLGELEQRKAAAQDKLAKVRQSIDEQKSKRT-------------ESDDRAAKLQRLAE-------LQASVKDLKAKVQHLAD----------------------NDPEILAQLERSVQVAKIGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 203 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
BLAST of jgi.p|Trimin1|351133 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9763 ID=mRNA_9763|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1102bp|location=Sequence derived from alignment at Contig_81:265488..266680+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCGCAATAGCGCCGGCGGCAGCAGGCGACCGCAGCAGCGAGACTACAAAGback to top protein sequence of jgi.p|Trimin1|351133 >Trimin1|351133|estExt_Genemark1.C_Ctg_810043 ID=Trimin1|351133|estExt_Genemark1.C_Ctg_810043|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp MGFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQback to top mRNA from alignment at Contig_81:265488..266680+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9763 ID=mRNA_9763|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1193bp|location=Sequence derived from alignment at Contig_81:265488..266680+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_81:265488..266680+ >mRNA_9763 ID=mRNA_9763|Name=jgi.p|Trimin1|351133|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=981bp|location=Sequence derived from alignment at Contig_81:265488..266680+ (Tribonema minus UTEX_B_3156 )back to top |