mRNA_9591 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A835YXT1_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT1_9STRA) HSP 1 Score: 507 bits (1305), Expect = 1.360e-181 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1 Query: 1 TCTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 TCTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR Sbjct: 1 TCTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 252
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A818LZ82_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818LZ82_9BILA) HSP 1 Score: 177 bits (450), Expect = 4.250e-50 Identity = 100/251 (39.84%), Postives = 143/251 (56.97%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C W VVTTIF P+ A + + W ++V+ADK + Y + +Y+SVE Q+ L + +PWNHFG KN+GYL A L GA+ ++D DDDNVL + + P + + + S FN YP+MGA++ P WPRGFPL+ IK E C + E + +V + Q+LA +DPDVDAIYR+T PLPL+F + + PYNAQA++H++ + +LLP+TVHGR Sbjct: 39 CDSWVVVTTIFPPSEAVQKAARLD-GWCVVVVADKKS--SPSYYVSNIVYLSVEAQKKLVNHYKFVQLIPWNHFGRKNIGYLYAILQGAQYIFDLDDDNVLKQSHISPPKSVIEMTVSNCT-----------VFNVYPTMGASKHPSWPRGFPLEKIKQE------CYWTQERREVH-KDEVVIFQSLADNDPDVDAIYRMTLPLPLHFKSHTS--VGIPPGVFVPYNAQASMHYRKSFWGLLLPITVHGR 266
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A0G4IGI5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IGI5_PLABS) HSP 1 Score: 177 bits (450), Expect = 2.610e-49 Identity = 109/260 (41.92%), Postives = 149/260 (57.31%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERG---IYVSVEVQQSLAKASP-LIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIE-ANVTSK-VAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKI---LLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C +W+VVTTIF P+ A K GP+W ++++ D+ P Y +E +Y+ Q++ K P + L WNHFG KNVG+L A HGA+ +WDFDDDN+L K + E + + P +NPY MGA SP WPRG PL IK G +S++ A V + VA++Q+LA HDPD+DAIYRLT PLP FNF+P +++ +TL+P NAQA L +A + +LLPVTVHGR Sbjct: 117 CKQWSVVTTIFEPSDAVKKQANLGPDWCIVIVGDRKSPPV--YHVEGSSTIVYLDANDQETFGKEFPEFFSTLNWNHFGRKNVGFLYAIAHGAQAIWDFDDDNIL---KDHADIKVPGEDEDYSVDLPKDHDFP--TYNPYVKMGAPHSPSWPRGIPLTHIKDS-------GSWKSSLQRARVKGRDVALIQSLADHDPDMDAIYRLTMPLP--FNFQPPSDAAPIVLPPKTLAPLNAQACLFRRAAFWMLLLPVTVHGR 360
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A812JXG3_SYMPI (STL1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812JXG3_SYMPI) HSP 1 Score: 170 bits (431), Expect = 3.820e-48 Identity = 106/262 (40.46%), Postives = 148/262 (56.49%), Query Frame = 1 Query: 7 TRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERG-----IYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGII-----PAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEP--EKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 TRWAV+TTI PT A + + + W + VI+D GP A Y L R +++ +Q+ LA S ++++PWNHFG KN+GYL+A GA+V+WDFDDDN++ A + +SGI+ P G G N Y ++G PCWPRGFPL +S A + S S + + +VAVLQ+LA DPDVDAI+RLT P F+P +++L + T P NAQA LH + + +LLP+TV GR Sbjct: 33 TRWAVLTTINGPTPAVQQLAE-ADGWCIAVISDLKGP--ARYDLPRASSHGLFFLNASLQKKLAADSTFVSSIPWNHFGRKNLGYLVAIARGAQVIWDFDDDNLVTAGDFPD---FPRGLDSGILQVLWTPGPGAHLGSGGVLNIYSALGCPVWPCWPRGFPLSLARSRAPNRSEWLQS--SELSKPSKRVAVLQSLADKDPDVDAIFRLTSPSATEIYFQPPGKEVLALPAFTFCPANAQAALHRRDAFWGLLLPMTVSGR 286
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: D7FLI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI5_ECTSI) HSP 1 Score: 170 bits (431), Expect = 3.400e-47 Identity = 116/268 (43.28%), Postives = 151/268 (56.34%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARK--CRGPGA-AFNPYPSMGATESPCWPRGFPLQDIK---SEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQP---LPLYFNFE-----PE---KILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C RWAV+T+IF PT + + +W ++V+ D+ GP AEY +E IY++ + Q+ L ++ LPWNHFG KN+GYL A HGA V++D DDDN L P A V ++ S + PA+ GP A NPY G + WPRGFPL I S E+A + S ++ V+QALA HDPDVDA+YRLT P LP F+FE PE + +V +PYNAQATLHF + MLLPVTVHGR Sbjct: 28 CERWAVLTSIFEPTDTVRQLGA-AEDWCVVVVGDQNGP--AEYNVEGVIYLTPQDQEQLPYR--IVPLLPWNHFGRKNIGYLYAVHHGATVIYDVDDDNAL-----IHPEAGVPHALSPVTPASTTSFAVGPEAFVHNPYGCFGGPGN-VWPRGFPLDSINDADSNRCDEVAVDSAGESAAPEEGWRLGVVQALANHDPDVDAVYRLTYPPGGLP--FDFEVPDPVPEGMSSLKIVPPAAFTPYNAQATLHFPPAFWGMLLPVTVHGR 282
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A8B7XWL1_ACAPL (probable glycosyltransferase STELLO2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWL1_ACAPL) HSP 1 Score: 170 bits (431), Expect = 7.660e-47 Identity = 109/251 (43.43%), Postives = 137/251 (54.58%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C RW VVTTI+ PT + W ++V+ADK GP + P Y+ V Q+S L +PWNHFG KN+GYL A HGA++++D DDDN PL + + + AR GA +NPYP+ G WPRGFPL IK ++ A A + +V V+Q LA HDPDVDAIYRLT LP FN P + L+V +R SPYNAQATLH + MLLPVTVH R Sbjct: 96 CDRWIVVTTIYKPTPILPKISSL-KGWCMVVVADKKGPQSMNIP--NVDYLDVVQQESCGYK--LCRVVPWNHFGRKNIGYLYAIEHGAKLIYDTDDDNA--------PLFPEVPAFDN-VGYARYVTAGGAVWNPYPTFGQNTK-VWPRGFPLSRIKDQSTKIAAESGKA------LPQQVGVVQFLAQHDPDVDAIYRLTSELPFDFNPTPRR-LVVPKRMFSPYNAQATLHAHDAFWGMLLPVTVHSR 324
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: W7TUS0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUS0_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.570e-44 Identity = 100/261 (38.31%), Postives = 152/261 (58.24%), Query Frame = 1 Query: 1 TCTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKC--RGPGAAFNPYPSMGATE----SPC--WPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPE-KILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 TC +WAVVTTIF PTA K + + +W ++V+ D+ P + + I++ E Q++L +I L WNHFG KN+G+L A HGAEV++D DDDN+L P + + + G + ++ G +NPYP+ G+ SP WPRGFP+ I + ++ G ++E V + ++Q+LA HDPDVDA+YRLT LPL F+ ++ ++ ++P+NAQAT+ KAG + MLLP+TV+GR Sbjct: 105 TCNKWAVVTTIFGPTALVKQLVEM-KDWCVVVVGDQQSPSTYDIQSDNLIFLGPEEQEALPYH--IIPLLKWNHFGRKNIGFLYAMQHGAEVIYDTDDDNILKVDSRGKPF--IPDCKLGELALSKDVVRSGQSQVYNPYPNFGSVRVKDGSPAFVWPRGFPVDLITDASTWNVSLGVEEETLEGGV---ITIVQSLADHDPDVDALYRLTSHLPLRFHSGGSARLEVIPPGVMTPFNAQATVFGKAGFWGMLLPITVNGR 357
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A6H5JQ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ39_9PHAE) HSP 1 Score: 167 bits (423), Expect = 7.160e-44 Identity = 113/262 (43.13%), Postives = 149/262 (56.87%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAF-NPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAA--SIEANVTSKVAVLQALAGHDPDVDAIYRLTQP---LPLYFN----FEPEKILL-VSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C +WAV+T+IF PT K + + W ++V+ DK GP AEY + Y++ Q +L + LPWNHFG KNVGY+ A HGA+V++D DDDN L + P A V + E ++ +R P ++ NPY GA WPRG+PL I+ ++ H AA ++ S++ V+QALA HDPDVDAIYRLT P LP FN PE L V ++PYNAQATLHF + MLLPVTVHGR Sbjct: 81 CEKWAVLTSIFEPTETVKQLAELR-GWCVVVVGDKNGP--AEYHVTGVKYLTPGDQDALPYR--ITEILPWNHFGRKNVGYMYAIQHGAKVIYDVDDDNALIHPEEGVPHAGVSSIEDNVL--SRFSGHPSSSVHNPYGCFGAP-GVSWPRGYPLPAIQDDSP------HHAAYCDVDGISGSRIGVVQALANHDPDVDAIYRLTHPPGGLPFSFNPGAPGTPESTLRGVPADKMTPYNAQATLHFPVAFWGMLLPVTVHGR 328
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A1S3JBQ2_LINUN (probable glycosyltransferase STELLO2 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JBQ2_LINUN) HSP 1 Score: 162 bits (411), Expect = 7.410e-44 Identity = 103/257 (40.08%), Postives = 140/257 (54.47%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAAS------ELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C +W V+TTIF P+ K + + +W ++V+ADK GP+ +Y + Y+SV Q+S + L WNHFG KN+GY+ A HGAE ++D DDDNVL AK P I + G +NPYP M WPRGFPL+ IKS+ A EL G K+ ++Q+LA ++PDVDAIYR TQPLP F+ + E + V + ++PYNAQAT+ F+ LPVTV GR Sbjct: 102 CKKWVVITTIFEPSELVKQLSEI-TSWCVVVVADKKGPE--KYVVPNVKYLSVLEQESCQ--FHICKLLIWNHFGRKNIGYMYAIHHGAEYIYDTDDDNVLRRAKIPDPAK---------IKGVKNINMKGTVWNPYPMMSKYPD-SWPRGFPLEKIKSKEAKTQSFTDELPLG------------KIGIIQSLADNEPDVDAIYRFTQPLPFDFHHK-ELYVAVPQGVMTPYNAQATMTMYDAFFSTYLPVTVKGR 330
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Match: A0A0H5RCI1_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RCI1_9EUKA) HSP 1 Score: 166 bits (420), Expect = 2.550e-43 Identity = 102/258 (39.53%), Postives = 142/258 (55.04%), Query Frame = 1 Query: 4 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERG---IYVSVEVQQSLAKASP-LIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPG-AAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVT-SKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEK-ILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTVHGR 756 C W+VVTTIF P+ + + GP+W ++V+ D+ P YPL +Y+ V Q+S A P I AL WNHFG KNVG+L A GA+ +WDFDDDN+L ++N + +I G +NPY GA P WPRG PL IK + ++A + V + + ++Q+LA HDPD+DAIYRL QPLP F I+++ TL+P NAQA L ++ + +LLP+TVHGR Sbjct: 125 CKYWSVVTTIFDPSDSVRRQANLGPDWCIVVVGDRKSPPV--YPLTGSSQLVYLDVPAQESYALRFPEFINALSWNHFGRKNVGFLYAIEQGAKSIWDFDDDNLLKDGID------IINPDDEVIVEVDVPEQDGFPTYNPYIHFGAPHFPSWPRGIPLTHIKEPGS------YNATMTRSKVRGADIGLIQSLADHDPDMDAIYRLVQPLPFTFQTSSSAPIVVLPPNTLAPLNAQACLFKRSAFWMLLLPITVHGR 368 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144515 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9591 ID=mRNA_9591|Name=jgi.p|Trimin1|144515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=756bp|location=Sequence derived from alignment at Contig_29:595345..599077+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACATGCACCCGCTGGGCAGTTGTCACCACAATATTTGCGCCCACTGCTGCback to top protein sequence of jgi.p|Trimin1|144515 >Trimin1|144515|gw1.29.70.1 ID=Trimin1|144515|gw1.29.70.1|Name=jgi.p|Trimin1|144515|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=252bp TCTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIback to top mRNA from alignment at Contig_29:595345..599077+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9591 ID=mRNA_9591|Name=jgi.p|Trimin1|144515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3733bp|location=Sequence derived from alignment at Contig_29:595345..599077+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:595345..599077+ >mRNA_9591 ID=mRNA_9591|Name=jgi.p|Trimin1|144515|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=756bp|location=Sequence derived from alignment at Contig_29:595345..599077+ (Tribonema minus UTEX_B_3156 )back to top |